Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4811 ATGGCAGAAACTGCAGTATTGTTTGCCCTGGGGGAAGTGTTCCAAATCTTAAAAGAAGAAACAAATTTGCTGAGTGGTGTACACAAAGATTTCTCAGACATCAAAGATGAACTTGAAAGCATTCAAGTCTTCCTCAGAGATGCAGACAGAAGGGCTGCGGATGAAGCGGACGCCAATGATGGAATAAGAACTTGGGTGAAGCATATGAGAGAAGCATCATTTCGCATTGAAGATGTCATTGATGAATACCTTCGGCTTACGCATAGGGCCAATCCTACTGGATGTGGATCTTTAGTCTGCAAGATTGCAAGCCTGATCAACACTTTGATTCCTCGTCATCACATAGCATCTGAGATTCAGGACATTAAATTGACAATTCGTGGAATCAAGGAAAGAAGTGAGAGGTATAACTTTCAAATTTTACATGAACCAGGTTCATCAAGCAGAAACAACACTAGAGAGACAGAAAATGGAAGATGGTGTGATCCTCGACTGTCTTCCCTTTTCATTGAAGAAACAGAAATTGTAGGATTTGAAGGCCCAAGAGAAGAACTATTTGGTTGGTTATTGGAGGGTGCAGCTGAGCGCACAGTGATTTCAGTGGTTGGAATGGGGGGTCTAGGAAAAACCACTCTTGCCAAGCTAGTTTATGATAGCCAAAAGTTAACATCACAGTTTGATTGCCGTGCTTGCATCACAGTTTCACAATCATACACTGTGAGGGCGTTATTGATAAACATGATGGAGCAATTTTGTAGGGACACTAAAGACCCTTTACTTCTGATGTTACACAAAATGGATGACAAGTCACTAATTACAGAAGTGAGGCAATACTTGCAACATAAGAGGTATTTGATATTCTTTGACGATGTATGGCAAGAAGATTTTTCCGACCAGGTTGAATTTGCTATGCCTAATAACAACAATGGTAGTAGGATCATAATCACCACTAGAATGATGCAAGTTTCAGATTTTTTCAAGAAATCGTTTCTAGTTCATGTCCACAACTTGCAACTTTTGTCTACAGAGAAAGCATGGGAACTCTTCTGCAAGAAAGTATTTAGATTTGAGCTTGATGGGTATTGTCCACCAGAGCTTGAGGCTATTTCAAAAGATATTGTTCGAAAATGCAAGCAACTACCATTGGCAATTGTAGCCATTGGTGGCCTACTCTCAACAAAATCTAAGACCATGATTGAATGGAAAAATGTGAGCGAAAATCTGAGCCTAGAATTGGGACGTAATGCCCATTTAACTAGTCTAACAAAGATTTTGTCGCTTAGTTATGATGGTCTGCCTTACTACTTAAAACCATGCATTTTGTATTTTGGTATATATCCAGAAAACTATTCTATTAATCACAAGAGATTAACTCGACAATGGATAGCTGAAGGTTTTGTTAAATCTGATGAGGGAAGAACTCCGGAGCTAGTTGCAAACAAGTACTTGTCTGAATTGATTCACAGAAGTCTGGTTCAGGTACTGAATGTTGGTTTTGAAGGGAAAGTACAAACATGTCAAGTGCATGATTTGTTGCGGGAAGTGATCATTAGAAAAATGAAGGAATTAAGTTTCTGTCATTTTGTGCATGAAGATTGTAACACAGCCGCATTTGGAATAACTAGACGCCTATCTGTAGATACTAATTCCAACAATACATTGAAGAGCACAAACAACTCACATTTTCGTGCTATTCATTTTTATGAAAAAGGAGGATTGTTGGAGCCTTTCATTGGTAAATTATGTTCCCAGTCAAAGATTTTGAAGGTACTTGACATTCAAGGGACATCTTTGAATCATATACCTAATAATTTTCACTTAAGATACATAAACCTAAGGGGTACAAAAGTACAGGCTCTTCCTAAATCTGTTGGTGAGCTAAAGCACTTAGAGACATTGGATTTAAGAGACACGCTTGTGCGTCATTTACCAAGTGAAATAAACAAGCTCACAAAGCTACGGCACCTTCTTGTTTTCCATCGTAACTATGAAGCAAAGTATTCTCTTTTAGGCTTTACAACTGGTGTACGCATGGAAAAAGGTATTAAAAACATGACTTCCCTACAAAATCTTTATTATGTGGATGCAGATCATGGTGGCATAGATCTCATTCAAGAGTTGAAAATGTTAAGGCAGTTAAGGAGGCTTGGTGTAAGGCGTGTACGAAGAGAACATGGGAATGCCTTAAGTGCTGCAATAGTAGAGATGAAACACCTTGAAAATCTCAATATCACTACAATAGTTGAGGATGAAATCATTGACTTGAACTTTACATCATCCCCACCCCAACTTCAGCGGCTACATTTGAAAGCGAGACTACAGAAGTTGCCTAACTGGATTCCAGAACTTGAGTATCTTGTTGAGATAAAGCTGGCTTTATCTAAGTTGAAAGATGATCCGCTACAGACACTAAAAACCTTGCCAAATCTGCAGAAGTTCGGTCTGTGGGACAATGCCTATGATGGTGAATTTCTGCATTTTCAAAACGGAGGGTTTCTAAAATTGAAGAGGCTGGACCTCAGTCGCTTGACTACTGTAAATTTTGTCCTTATGGAAAAAGGGACTTTGCCCTCTCTTGAATATCTTACAATGGACAGAATCCCACAACTGAAGGAGGTACCCTCTGGCATCAAGCACTTAGATAACCTCAAAGTTATTAACTTCACTGAAATGCCAGCTGAATTTGTAGAGAGTATTGTTCCAGACAACGGAAAAGACTACTGGATTATCAAGCATGTTCCTCTTGTATCCATTCATCACTCGAATGGCCCAAAATTCTTTGATTATGAGATTCGCACTATTCACTCGTCTTCCTCAGAGTCATATGCAAATTGA 2835 0.3901 MAETAVLFALGEVFQILKEETNLLSGVHKDFSDIKDELESIQVFLRDADRRAADEADANDGIRTWVKHMREASFRIEDVIDEYLRLTHRANPTGCGSLVCKIASLINTLIPRHHIASEIQDIKLTIRGIKERSERYNFQILHEPGSSSRNNTRETENGRWCDPRLSSLFIEETEIVGFEGPREELFGWLLEGAAERTVISVVGMGGLGKTTLAKLVYDSQKLTSQFDCRACITVSQSYTVRALLINMMEQFCRDTKDPLLLMLHKMDDKSLITEVRQYLQHKRYLIFFDDVWQEDFSDQVEFAMPNNNNGSRIIITTRMMQVSDFFKKSFLVHVHNLQLLSTEKAWELFCKKVFRFELDGYCPPELEAISKDIVRKCKQLPLAIVAIGGLLSTKSKTMIEWKNVSENLSLELGRNAHLTSLTKILSLSYDGLPYYLKPCILYFGIYPENYSINHKRLTRQWIAEGFVKSDEGRTPELVANKYLSELIHRSLVQVLNVGFEGKVQTCQVHDLLREVIIRKMKELSFCHFVHEDCNTAAFGITRRLSVDTNSNNTLKSTNNSHFRAIHFYEKGGLLEPFIGKLCSQSKILKVLDIQGTSLNHIPNNFHLRYINLRGTKVQALPKSVGELKHLETLDLRDTLVRHLPSEINKLTKLRHLLVFHRNYEAKYSLLGFTTGVRMEKGIKNMTSLQNLYYVDADHGGIDLIQELKMLRQLRRLGVRRVRREHGNALSAAIVEMKHLENLNITTIVEDEIIDLNFTSSPPQLQRLHLKARLQKLPNWIPELEYLVEIKLALSKLKDDPLQTLKTLPNLQKFGLWDNAYDGEFLHFQNGGFLKLKRLDLSRLTTVNFVLMEKGTLPSLEYLTMDRIPQLKEVPSGIKHLDNLKVINFTEMPAEFVESIVPDNGKDYWIIKHVPLVSIHHSNGPKFFDYEIRTIHSSSSESYAN* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4811 944 SUPERFAMILY L domain-like 508 898 - -
Tpr3g4811 944 PRINTS Disease resistance protein signature 198 213 - -
Tpr3g4811 944 PRINTS Disease resistance protein signature 278 292 - -
Tpr3g4811 944 PRINTS Disease resistance protein signature 377 391 - -
Tpr3g4811 944 PRINTS Disease resistance protein signature 625 641 - -
Tpr3g4811 944 Pfam Rx N-terminal domain 5 90 IPR041118 -
Tpr3g4811 944 Pfam NB-ARC domain 183 430 IPR002182 GO:0043531
Tpr3g4811 944 PANTHER DISEASE RESISTANCE PROTEIN RP 30 895 IPR044974 GO:0006952
Tpr3g4811 944 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 443 IPR027417 -
Tpr3g4811 944 CDD RX-CC_like 2 131 IPR038005 -
Tpr3g4811 944 Gene3D - 4 116 - -
Tpr3g4811 944 Gene3D - 339 428 IPR042197 -
Tpr3g4811 944 PANTHER - 30 895 - -
Tpr3g4811 944 Gene3D - 165 331 IPR027417 -
Tpr3g4811 944 Gene3D - 429 520 IPR036388 -
Tpr3g4811 944 Gene3D Ribonuclease Inhibitor 550 902 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4811 Tpr-Chr3 52933630 52937746 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4811 198 396 WRKY Transcription Factor Family AT5G45050 24.757 8.79e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4811 K13457 - gmx:100801561 1300.42