Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4801 ATGAGTACAGAAGCTCAAACAATAGTGGTGATCCAAGATGCATCAAGAGATGTTGGTTTAAAGGCAATAGAAAAGGCCCTCAAAAAGTTATCAGTAAAAGCTGGAGATCAGCTTATAATTATTGCCATTTTTAATTGGTTTAGCAGTCCTATGGGTTACATGGTCTCAGTTGATTCAAGTTATTTTGTTTCATCCAACAAGAAAATAATTTCAGAAAACTTTACCAAGAGAAAGAATGACTATCATACGAACCGATACATCAACAAACTCTCTGAGTACTGTCAAAAGAATGAGATTGAATTCCAACTAGAAGTGAATGTAGGACCAGCTTCCCAGGTTATTTCTGATGCTGCAGCAAAATTTCAGCCTACAACTTTGATACTTGATAAACAGATCCACAGAAACATGAAGAATTTCGTGGACCGGATCCCTTGTGGTATGTATAGGATAACAAGTGACAACTCCCTTGAAAAGTTGAAAGATCCAAAATCAACAGCTTCCAAACTCTCTGAAAGGCAAGAAAATATAAGCTATTCAGAAATGATACCAGGAAGTGAAGAGGATGGAGTTTCTCTTCAGATGTCCAAGTCTTCATCTACTGATCTTTTCACGTCAACCGGAGCTTCAAGTCAGTGTAGTACTGATGTCTCAACTTCTAGCATTGCAAGTTCACAATATGTCCTTCAAAAATACCAAATTGGGGAGTTTTTTCCGGAACAAGAAAAACAAGGGCGACAATCGCTATTTCATATTTCTGGAATTCAAGAAACAAGACAAACAGAAGTTATTCATAGGGAGGAAGACTTTACAATTCCAGTTTGTTCTGTGTGTAATAACAGAAGACTGAAAATTGAATCGAAACGAGAGTTCAGTTACTTAGAGCTCTACACTGCTACACAAGGATTCTCTGCTAAGAACTTTCTGTCAGAAGGTGGATTTGGATCTGTTTACAAAGGACAACTTGATGGAATGCCAATTGCTGTTAAGCAACATAAAAGTGCAAGCTTCCAAGGAGAGAAGGAATTTAGGTCTGAAGTCAATGTACTTCGAAGAGCAAGACATGAGAATGTAGTCATGCTTCTAGGTTCATGTTCAGAAGGAAATAATAGGCTTCTTGTTTATGAATATGTCTGCAATGGTTCACTGGATCAACATCTATCAGAACACTCTAGATCACCTCTTACATGGGAAGATAGGATCAAAATAGCTATTGGAGCAGCCAAAGGCTTACTATACTTGCACAAAAATAGCATAATACACAGAGATGTCAGACCAAACAATATCCTTGTAACACATGATCTCCAACCATTGATAGGAGATTTTGGACTAGCAAGAACTCACAACAATGACTTGACACACTCGACGGAAGTTGTTGGTACATGGGGGTATCTGGCACCAGAATATGCAGAATATGGAAAAGTGTCAAGTAGAACAGATGTATATTCTTTTGGAGTGGTTCTACTACAGCTTATCACTGGAATGAGAACGACAGACAAAAGACTCGGAGGAAGAAGCCTCGTTGGATGGGCAAGGCCACTATTAAAAGAGAGAAATTATCCAGATCTAATTGATGAGAGGATCATTGATACTCATGATTACCATCAATTATTTTGGATGATACGACTAGCTGAGAAATGTCTAAGCAGGGACCCTAAGAAAAGACTAACCATGGATGAGGTTGTTAATGCTTTGACCGACATTTCCGAAGGCAACACATGTGACATTGGAACTGGCGATTACACCCCTGCAATGTCAGATTCATCCTATACTAGTGAACCAGAATTTGATGAAAATGAAGATGAGAATGAACCTTTTGAGGATGAAGGTAACTTACTAAGTACCATTTCAGAATCAACAGAAGGAAGTGATTACACTATTCAGATGAGGCATATGAGTGTAAGGCAGCCACCATCTCCTCCAATTAAAAACTTCTATTCAAGTGGCTCAAGCTCATTTCAGTTTTCTGATGAATCAAATAGTGACTATGAAGCACATAATGAAAAGAGTACAGAAATTTCAAAATCCAAAGTTGGTTTAATCAACTCTTAG 2049 0.3807 MSTEAQTIVVIQDASRDVGLKAIEKALKKLSVKAGDQLIIIAIFNWFSSPMGYMVSVDSSYFVSSNKKIISENFTKRKNDYHTNRYINKLSEYCQKNEIEFQLEVNVGPASQVISDAAAKFQPTTLILDKQIHRNMKNFVDRIPCGMYRITSDNSLEKLKDPKSTASKLSERQENISYSEMIPGSEEDGVSLQMSKSSSTDLFTSTGASSQCSTDVSTSSIASSQYVLQKYQIGEFFPEQEKQGRQSLFHISGIQETRQTEVIHREEDFTIPVCSVCNNRRLKIESKREFSYLELYTATQGFSAKNFLSEGGFGSVYKGQLDGMPIAVKQHKSASFQGEKEFRSEVNVLRRARHENVVMLLGSCSEGNNRLLVYEYVCNGSLDQHLSEHSRSPLTWEDRIKIAIGAAKGLLYLHKNSIIHRDVRPNNILVTHDLQPLIGDFGLARTHNNDLTHSTEVVGTWGYLAPEYAEYGKVSSRTDVYSFGVVLLQLITGMRTTDKRLGGRSLVGWARPLLKERNYPDLIDERIIDTHDYHQLFWMIRLAEKCLSRDPKKRLTMDEVVNALTDISEGNTCDIGTGDYTPAMSDSSYTSEPEFDENEDENEPFEDEGNLLSTISESTEGSDYTIQMRHMSVRQPPSPPIKNFYSSGSSSFQFSDESNSDYEAHNEKSTEISKSKVGLINS* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4801 682 PANTHER TYROSINE KINASE FAMILY PROTEIN 20 592 - -
Tpr3g4801 682 SMART tyrkin_6 302 564 IPR020635 GO:0004713|GO:0006468
Tpr3g4801 682 Gene3D Transferase(Phosphotransferase) domain 1 377 577 - -
Tpr3g4801 682 MobiDBLite consensus disorder prediction 592 607 - -
Tpr3g4801 682 MobiDBLite consensus disorder prediction 639 659 - -
Tpr3g4801 682 MobiDBLite consensus disorder prediction 629 682 - -
Tpr3g4801 682 SUPERFAMILY Protein kinase-like (PK-like) 285 564 IPR011009 -
Tpr3g4801 682 ProSitePatterns Tyrosine protein kinases specific active-site signature. 418 430 IPR008266 GO:0004672|GO:0006468
Tpr3g4801 682 CDD STKc_IRAK 308 567 - -
Tpr3g4801 682 Pfam Protein tyrosine and serine/threonine kinase 305 564 IPR001245 GO:0004672|GO:0006468
Tpr3g4801 682 Gene3D Phosphorylase Kinase; domain 1 274 376 - -
Tpr3g4801 682 MobiDBLite consensus disorder prediction 585 611 - -
Tpr3g4801 682 PANTHER OS01G0253100 PROTEIN 20 592 IPR045271 GO:0004714|GO:0006468
Tpr3g4801 682 ProSiteProfiles Protein kinase domain profile. 302 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4801 Tpr-Chr3 52866352 52872446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4801 290 579 Trihelix Transcription Factor Family AT1G70460 47.508 4.45e-80 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Tpr3g4801 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4801 - - gmx:100794450 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3424 4 40302532 40304416 Tpr3g4801 3 52866352 52872446 PCT