Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4796 ATGGCAACAAAACTCATACTCATAATTTCCATCCTTAGATTTCTTAGCTTCATGACCCTTTTCACAAAATCAATTGCACAATCTGCAAACTATGTAGGTGATGATTGTAAAAACTCAACAGAACAATCTCTTACAGCTACATACAAATCAAACCTTAACAAAGTATTGTCATTGCTTTCCTCTGATGCTATTGTAAGCAAAGGATATAATCACACAAGCATAGGTGATAACACAGTTGATGCTGTTTATGGTCTCTATGATTGTAGGGGTGATGTTAGAGGTTCATTTTGTCAATTTTGTGTTTCTACTGCTGCCTCAGATATTCCTCAATACTGTCCTAATAGAGCCTCAGTTACTATATGGTACAACTTTTGCATTCTCAGATATTCCAATCATAATTTCTTTGGAAAGCTAACAACAGATCCATCATGGTACAACATATCTGGGTCAGAAAACATCAATAATCCACAAGAACTTGAGAAAGCTGAGGATAATATGCAAAGTTTGATCAAAGAAGCTACTTTGGATACCAAAAATTTATTTGCAATGGGTGAGTTCAATTTGAGTACTAATAAAAAAAGATATGGAATGGTGCAGTGTAGTAGGGACCTTAATGACAAGCAATGTAATCAATGTTTGGGGGCTATGTTAGACAAAGTTCCTAAATGTTGTGGGACAAAGATTGGTTGGCAAGTTCTTGCTCCAAGTTGTTTGATAAAATATGATGATTTTAAGTTCTATGAACTTATTTATCAAACATCAACTCCTTTGGCAGCTGGCCAAGGAGGTTCAAAAATATCAAATACCTTGATCATCATCATAGTCATTGTGTTGGTGGTGGCAGTTGCTCTCATGAGTTGTTGTATCTACTTCATATGGAGGCTTAATCATTCAAATAAAGATGGATTAGAATCAGAGACAATTCCTATATCTCTTCATGACCGTAAAGGAAACGATTCAATAAATTCCAACCTTCCAATAATCCCTTTAACTTGGATTAAACAAAGTACTAATAACTTTTCCGAGTTATGTAAACTAGGAGAAGGTGGATTTGGCCCTGTTTATAAGGGTAATTTAGTAGATGGAACAGAAGTTGCAATCAAAAGGCTATCTATAACATCTGGTCAAGGTTCACAAGAGTTCAAAAATGAAGTGATCTTTATAGCTAAATTGCAACATAGAAACCTTGTGAGACTTTTGGGTTGCTGCATTGAGGATAATGAGAAGTTGCTTTTATATGAATACATGCCAAACTCTAGCCTTGACTTTCATCTATTTGATGATGAAAAAAGAAAACTTCTAGATTGGAAGTTAAGATTGAACATTATTAATGGAATTGCAAAAGGACTCTTGTACCTTCATGAAGACTCTAGACTTAGAGTAATCCATAGAGACTTAAAAGCTAGTAATGTTCTACTAGATCAAGAGATGAATCCAAAAATATCTGATTTTGGATTGGCAAGGGCATTTGAAAAAGACCAAGCTCAAGAAAATACAAGAAGAGTTGTGGGCACATATGGATACATGTCTCCAGAGTATGCTATGGAGGGGTTATATTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTTTATTAGAGATAATTTGTGGACAAAGAAATAGTGGATTCTATCTCGGAGAACACGGTCAAAGTCTTCTTATATATAGTTGGAATCTTTGGCATGAAGGAAAAAGTTTGGAACTTGTAGATCCAATATTGAAAGAGACATACATAGCCAATGAAGTTGTAAGGTGCATACACATTGGTTTGTTGTGTGTACAAGAAGATGCAATTGATAGACCAACCATGTCCAATGTTGTTGTCATGTTTGCAAGTGATACAATGGCACTTCCCAATCCTAATCATCCTGCATTTTCAGTTGGAAGAAACGTTAAGGAACATGGATCAACTTCAAAAACTTCCAATGATCCTTCTGTTAATGAAATTACAATATCAAATGTTTTCCCTAGGTAG 1977 0.3505 MATKLILIISILRFLSFMTLFTKSIAQSANYVGDDCKNSTEQSLTATYKSNLNKVLSLLSSDAIVSKGYNHTSIGDNTVDAVYGLYDCRGDVRGSFCQFCVSTAASDIPQYCPNRASVTIWYNFCILRYSNHNFFGKLTTDPSWYNISGSENINNPQELEKAEDNMQSLIKEATLDTKNLFAMGEFNLSTNKKRYGMVQCSRDLNDKQCNQCLGAMLDKVPKCCGTKIGWQVLAPSCLIKYDDFKFYELIYQTSTPLAAGQGGSKISNTLIIIIVIVLVVAVALMSCCIYFIWRLNHSNKDGLESETIPISLHDRKGNDSINSNLPIIPLTWIKQSTNNFSELCKLGEGGFGPVYKGNLVDGTEVAIKRLSITSGQGSQEFKNEVIFIAKLQHRNLVRLLGCCIEDNEKLLLYEYMPNSSLDFHLFDDEKRKLLDWKLRLNIINGIAKGLLYLHEDSRLRVIHRDLKASNVLLDQEMNPKISDFGLARAFEKDQAQENTRRVVGTYGYMSPEYAMEGLYSVKSDVFSFGVLLLEIICGQRNSGFYLGEHGQSLLIYSWNLWHEGKSLELVDPILKETYIANEVVRCIHIGLLCVQEDAIDRPTMSNVVVMFASDTMALPNPNHPAFSVGRNVKEHGSTSKTSNDPSVNEITISNVFPR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4796 658 ProSiteProfiles Protein kinase domain profile. 340 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4796 658 Coils Coil 159 179 - -
Tpr3g4796 658 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 655 - -
Tpr3g4796 658 PANTHER PROTEIN KINASE DOMAIN 21 655 - -
Tpr3g4796 658 Gene3D - 143 246 IPR038408 -
Tpr3g4796 658 Gene3D - 28 134 IPR038408 -
Tpr3g4796 658 Gene3D Transferase(Phosphotransferase) domain 1 416 618 - -
Tpr3g4796 658 Pfam Domain of unknown function (DUF3403) 613 658 IPR021820 GO:0004674
Tpr3g4796 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Tpr3g4796 658 ProSiteProfiles Gnk2-homologous domain profile. 141 246 IPR002902 -
Tpr3g4796 658 Pfam Salt stress response/antifungal 36 131 IPR002902 -
Tpr3g4796 658 Pfam Salt stress response/antifungal 163 242 IPR002902 -
Tpr3g4796 658 Gene3D Phosphorylase Kinase; domain 1 307 415 - -
Tpr3g4796 658 SMART serkin_6 340 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4796 658 Pfam Protein tyrosine and serine/threonine kinase 344 608 IPR001245 GO:0004672|GO:0006468
Tpr3g4796 658 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Tpr3g4796 658 SUPERFAMILY Protein kinase-like (PK-like) 322 627 IPR011009 -
Tpr3g4796 658 CDD STKc_IRAK 346 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4796 Tpr-Chr3 52819230 52825412 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4796 10 658 Receptor kinase-like Gene Family AT4G05200 42.375 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g4796 PK_Tyr_Ser-Thr 3.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4796 - - ahf:112718031 870.922