Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4795 ATGATCAGAAACAGTAATTGTAGCAGCATAAGAATGCATCATATATGGTTATTTACCATCAAATTCATATACCTTTTCTATTTTGCTGCATCTCAGAACAATAGCAATACACAAGAACTACTTGATTATAGATATGCTTGTTTGGACCAATCTTCTGTTGCTCCTTCCACCACATACCAAACCAACCTCAACAATTTGATGTCTTCATTATCATCAGATTCTGCTACAAGTAATGGTTTTGGAAATAGAACTTCAGGTAGTGATCAAAACAATAAGGTTTACGGACTCTACTTTTGTCGTGGCGATGTTAATACAAGTCTTTGTCATTCATGTGTTCAAAACTCTAGCAGATTGCTCGAACAACACTGTCCTAATAATGCTTCAGCAGTTTTGTGGTACCCCTTTTGTCTTGTGAGGTATTCAAACAATAATTTCTTTGGTAACCTTACTATAAGACCAAGGATTCCTATGTTTGATGCAAAACAGAATTTGACTAGTGCTGGTGAATTTGATAGTGATGCTAGAATTTTGATGAATGGTTTAATACAAATGGGATCACAGACAGATTTAATGTTTGGAACACATATGTTTAACATAAATGGTACTCAAAGTAGGTATGGTTGGGTGCAATGCAGCAGAGATATTACTAATGAGGAATGCAGAACTTGTTTGAGTAACTTGCTTGAGGATGTTGAAAATTGTTGTATGCAGAAGAAAGTGTGGAGAATATTTTCTCCAAGTTGTATTATGATGTATGAAACTCAACCATTCTTTGTGAATGGTACAATTTCTGAGCCAGCCAAAGAAAAGGATGACTCAAGGTCATGGATTATCATAGTCATTGTTGTAATTGGAATAGCAGTCGCAGCCCTATTGGCTTTCAGCGCATACTATTTCCGGTGCTTGAAACGTAAAAAAGAGAGAAATTCTATGCAAATCCTTAGTCCAATGTTTTCTCAAGATCAGACTGACATTGAGGAGACTGGAAATACTGACCTACCTATGATGCCTCTGAGTACCATTCTAAAGAGTACTAATAATTTTTCTGATGAATATAAATTGGGGAAAGGTGGATTTGGAACTGTGTACAAGGGTGTTTTAGCAGATGGAAGGGAAATTGCTGTGAAAAGGCTTTCAAAAACTTCCGTTCAAGGTGTGGAGGAATTAAAAAATGAATTAATATTGATTGCCAAATTGCAACATCGAAACCTCGTGAGACTATTGGCTTGCTGCATTGAGCAAAATGAAAAGCTTCTTATCTATGAATACTTGCCTAATTCAAGCCTTGATTTCCACCTATTTGATATCGTGAAGGGTGCAAAACTAGATTGGAAACAGCGATTAAATATTATTAATGGGATTGCTAAAGGGATTCTATATCTTCACGAGGACTCTAGGCTTAGAGTTATTCACAGAGATTTGAAAGCTAGCAATATACTGTTAGATCATGAAATGAATCCAAAAATATCAGACTTTGGACTGGCAAGAGCATTTGGAGGAGACCAGGATGAAGCAAATACAATTAGAGTTGTCGGAACTTATGGATACATGGCTCCAGAATATGCTATGGAAGGATTATTTTCGGTGAAGTCAGATGTTTTCAGCTTTGGTGTTCTTTTGCTAGAGATCATAAGTGGAAGAAAAAACAGCAAATTCTATCTTTCAGAGCCTGGACAAAGCCTTCCCATATATGTATGGAACCTTTGGTGCAAAAGAAAAGGTTTGGACTTGATGGATCCATTGATAGAAAAGTCATGTGTACCTAGTGAATATCTGAAGTGTATACATATTGGACTATTGTGTGTACAAGAAGATGCAGCAGATAGACCTACAATGTCAAGTGTTGTTCACATGCTTGCAAGTGACTCGGCGACTCTTACCAGCCCTACACGCCCTGCATTTTCTGTTGGAAGAGGTGACGTCCAACGAGCTGTTGTTGACCAAGAGTCTTCATCAAACACTTCTATCTCTGCAAATGAAGTAACCTTGTCTGAATTGAGGCCAAGATGA 2010 0.3731 MIRNSNCSSIRMHHIWLFTIKFIYLFYFAASQNNSNTQELLDYRYACLDQSSVAPSTTYQTNLNNLMSSLSSDSATSNGFGNRTSGSDQNNKVYGLYFCRGDVNTSLCHSCVQNSSRLLEQHCPNNASAVLWYPFCLVRYSNNNFFGNLTIRPRIPMFDAKQNLTSAGEFDSDARILMNGLIQMGSQTDLMFGTHMFNINGTQSRYGWVQCSRDITNEECRTCLSNLLEDVENCCMQKKVWRIFSPSCIMMYETQPFFVNGTISEPAKEKDDSRSWIIIVIVVIGIAVAALLAFSAYYFRCLKRKKERNSMQILSPMFSQDQTDIEETGNTDLPMMPLSTILKSTNNFSDEYKLGKGGFGTVYKGVLADGREIAVKRLSKTSVQGVEELKNELILIAKLQHRNLVRLLACCIEQNEKLLIYEYLPNSSLDFHLFDIVKGAKLDWKQRLNIINGIAKGILYLHEDSRLRVIHRDLKASNILLDHEMNPKISDFGLARAFGGDQDEANTIRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIISGRKNSKFYLSEPGQSLPIYVWNLWCKRKGLDLMDPLIEKSCVPSEYLKCIHIGLLCVQEDAADRPTMSSVVHMLASDSATLTSPTRPAFSVGRGDVQRAVVDQESSSNTSISANEVTLSELRPR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4795 669 ProSiteProfiles Gnk2-homologous domain profile. 152 257 IPR002902 -
Tpr3g4795 669 Pfam Salt stress response/antifungal 52 142 IPR002902 -
Tpr3g4795 669 Pfam Salt stress response/antifungal 162 254 IPR002902 -
Tpr3g4795 669 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 46 666 - -
Tpr3g4795 669 MobiDBLite consensus disorder prediction 647 669 - -
Tpr3g4795 669 ProSiteProfiles Protein kinase domain profile. 348 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4795 669 ProSiteProfiles Gnk2-homologous domain profile. 41 145 IPR002902 -
Tpr3g4795 669 SUPERFAMILY Protein kinase-like (PK-like) 331 619 IPR011009 -
Tpr3g4795 669 Gene3D Phosphorylase Kinase; domain 1 309 423 - -
Tpr3g4795 669 CDD STKc_IRAK 354 619 - -
Tpr3g4795 669 Gene3D - 41 145 IPR038408 -
Tpr3g4795 669 Gene3D - 156 257 IPR038408 -
Tpr3g4795 669 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 46 666 - -
Tpr3g4795 669 Gene3D Transferase(Phosphotransferase) domain 1 424 630 - -
Tpr3g4795 669 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Tpr3g4795 669 SMART serkin_6 348 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4795 669 Pfam Protein tyrosine and serine/threonine kinase 352 619 IPR001245 GO:0004672|GO:0006468
Tpr3g4795 669 MobiDBLite consensus disorder prediction 647 662 - -
Tpr3g4795 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4795 Tpr-Chr3 52812008 52816548 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4795 45 664 Receptor kinase-like Gene Family AT4G05200 41.369 6.92e-169 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g4795 PK_Tyr_Ser-Thr 5.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4795 - - gmx:100798691 1044.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4795 3 52812008 52816548 Tpr7g1552 7 17474623 17561510 PCT