Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4778 ATGATTAATGAGAAAATGAATGATTCACCATGTTTCACAGATTCTTCATCATTTTCAGTTCCAAATACTTTCATTGGTCTTCTTCTTCTTAACTTCAAAATCAGATCTTCATCTTCATGTAACAAAAACAACACTCTTCTCTTTACTCCTTCTGAGTTATTCAGAGATTTTGTCACAAGAGAATTCAATGCTTTTCTTTGGGTTTTTCTTCTTGTTATCACTACCCTTTTGGTTAAAAGACTCTCTGATCTCTTCACTTTGTTGTATAAAGCTAGAAAAATACCTGGACCTCCATCTTCATCGTTTTTTGGACACTACAAACTCTTCTCCAAACAAAATTTCAATGATGTGTTGTCAGAATCCCATGAGAAGTATGGTCCAATTGTTAAGCTGTGGTTAGGCCCTACTAAGCTTCTGGTGTCAGTTAAGGATCCAGTGCTAATTCAAGATATGCTTATAAAGGCCGAGGATAAATTACCTTTTACTGGAAAAGCCTTTCATCTAGCCTTTGGGGAATCAAGCCTTTTTGCTCCTTCCTATGAAAAGGTCCAAAAGAGAAGGGAGTTATTGGCAACAGAACTGAATGAAAGATTGATGACGACTGCTGATCTGAATCCTCTGAAAGTTGCAGACTTTATCATAGATCAAATAGAAAACTTCAAAGTCAGAGGAAGCATTGGTTGCGAGTTGGTTTCTCAGCATATGGCTTTCACATTAATGGGGGCGACATTCTTTGGAGATGTCTTCTTGGCTTGGCCGAAGGCTGCAGTATACGAGGAACTTTTTATGATGATTGCTAAAGATGCTTGCTTTTGGGCTTCCTATAATGTTACTCCATTTTGGAAACAAGGATTTTGGAGGTATCAACACTTATGTACAGAGTTAAGATGCTTAACTCAAGAAATCCTTCAACATTGCAGAAAGAGCTGCAAGAGTTTAGGCCATATTGATCAAAATGTTCATAGCGAGGATGGTGCACAATACAACTCTAATGACAGTTTCCAAAATTACCATTTCTTTCGTGACCTTAATGATCAGCAAAATTCTATGGAAGAACCTTACGGGAACATCATGCGTCTGATGCTTCATGGATGTCAAACTACAGGTTCTTTAATTGCCAATGTATTGACTAATCTTGCCGTGCATCTGGAAATTCAGGACAAGGTTTATTCAGAGATTAGCATGGTTGGGAAAAACCCATCAAAATATGAGCATGAAGAAGTTTATAGGATGCCATTGCTATTGGCTACAATTTATGAATCTGTACGCCTTCTTCCCACTGGTGCTATGCTACAGAGGTGTTCTACGAAACACGACGTGAGATTTTCAACTGGCGTAACCATACCTGCTGGAGCTGTAATGGTTGTGCCAGTTCAATTGGTACAGAAGGATGGCTTCAATTGGGGAAAAGATGCAAGTGATTTTAATCCATACCGATTTCTGTCAAACATTACAAAAGGATCAGGTTCTGAAGAACAACTTGATTATGGAATCAGCTCGTTCGTACTAAACGATCCAAATGAAAATGCAGCATTTCTTCCTTTTGGATCCGGTACGCGTGCATGCGTTGGGCAGAAATTTGTTATCCAAGTTGTTGCCACATTGCTGGCATCATTACTCAAGAAATATGAGATAAGACTCAACTGTAGCTCAGATGGTGACTCGGAACCAATCTTGAAAAATCATCTTCTTCAACATCATCCTAATTCACAAATACTGTTTGTGAGAAGGAACCAGTGA 1740 0.3862 MINEKMNDSPCFTDSSSFSVPNTFIGLLLLNFKIRSSSSCNKNNTLLFTPSELFRDFVTREFNAFLWVFLLVITTLLVKRLSDLFTLLYKARKIPGPPSSSFFGHYKLFSKQNFNDVLSESHEKYGPIVKLWLGPTKLLVSVKDPVLIQDMLIKAEDKLPFTGKAFHLAFGESSLFAPSYEKVQKRRELLATELNERLMTTADLNPLKVADFIIDQIENFKVRGSIGCELVSQHMAFTLMGATFFGDVFLAWPKAAVYEELFMMIAKDACFWASYNVTPFWKQGFWRYQHLCTELRCLTQEILQHCRKSCKSLGHIDQNVHSEDGAQYNSNDSFQNYHFFRDLNDQQNSMEEPYGNIMRLMLHGCQTTGSLIANVLTNLAVHLEIQDKVYSEISMVGKNPSKYEHEEVYRMPLLLATIYESVRLLPTGAMLQRCSTKHDVRFSTGVTIPAGAVMVVPVQLVQKDGFNWGKDASDFNPYRFLSNITKGSGSEEQLDYGISSFVLNDPNENAAFLPFGSGTRACVGQKFVIQVVATLLASLLKKYEIRLNCSSDGDSEPILKNHLLQHHPNSQILFVRRNQ* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4778 579 PRINTS E-class P450 group I signature 122 141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4778 579 PRINTS E-class P450 group I signature 372 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4778 579 PRINTS E-class P450 group I signature 512 522 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4778 579 PRINTS E-class P450 group I signature 522 545 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4778 579 PANTHER CYTOCHROME P450 4C3-RELATED 65 554 - -
Tpr3g4778 579 SUPERFAMILY Cytochrome P450 91 577 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4778 579 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 515 524 IPR017972 GO:0005506|GO:0016705
Tpr3g4778 579 PRINTS P450 superfamily signature 363 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4778 579 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4778 579 PRINTS P450 superfamily signature 513 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4778 579 PRINTS P450 superfamily signature 522 533 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4778 579 Gene3D Cytochrome P450 89 571 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4778 579 Pfam Cytochrome P450 95 573 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4778 579 PANTHER CYTOCHROME P450 FAMILY 4 65 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4778 Tpr-Chr3 52711515 52716578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4778 364 562 Cytochrome P450 AT3G14620 29.500 7.54e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4778 - - gmx:100809563 813.527