Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4776 ATGGGGACTGAAAAGCTTAGATCTTGTGCAAACTTCCTAGAGAATTCTATGCCCTACTTTGCCATGATCCTTTTACAATTTGGCTATGCAGGCATGAATGTTATAGCTAAGCTTTCTCTCAATGGAGGCATGAGTCACTATGTCCTTGTTGTATATCGCCACGCTATTGCAACTATTGCTATAGCTCCATTTGCCATTATCTTTGAAAGGAAGGCTCAACCAAAGATTACATTTCCCATTTTCATACAAATTTTCCTCCTAGCTCTTCTTGGGCCAGTGATAGATCAAAACTTATACTATGCTGGGTTGAAATTAACATCCCCAACCTTCTCATGTGCAATCAGCAATATGCTACCAGCAATGACATTTGTGATTGCGGTTTTATGCCGGATGGAAAAGATCAACATGAAGAAGTTGAGATGCCAAGCAAAGGTAATTGGAACAATGTTAACTGTGGCTGGAGCAATGTTGATGACCTTATACAAAGGTCCTATTGTGGAGTTGTTTTGGACTAAAGATACACTTCATAGTAAAAACAATACATCAAACATCACAACATCCTCAAGCAAGGATACTTGGCTCTTAGGCTCCACTTTGCTAATTATTTCAACTTTGGCATGGGCATCCCTCTTTGTTTTACAAGCTAAAGCTATAGAAACATACAAGAATCATCAACTTACACTCACATCACTTATATGTTTCTTTGGTACGCTTCTAGCTTTTGCTACCACTTTGGTTATGGAACAAAAAGCTTCTGTATGGACAATTGGTTGGGATATGAATTTATTAGCTTCTGCCTATGGGGGGATTGTTGCATCAAGTATATCATACTACGTACAAGGATTGGTCATAAAAAAGAAAGGGCCTGTTTTTGCAACTTCATTTAGCCCTTTGATGATGATCATTGTAGCAATCATGGGATCCTTCTTCCTTGCAGAGCATATTTTTCTTGGAAGTGCAATTGGTTCCATCTTGGTTGTGACAGGCTTATATTCTGTTTTGTGGGGAAAGCACAAAGAACAAGTGGAAATGAAAGTGGCGCCAGATGATGAAAAACCGTTGCCTACAAAGAGTGCTCGGTTAAATGGAAATATAGGGAAACTTTCTGAATCCATTGATCAACTTAGTGAAGCAAAATCATTTCAGAAAGTAGAACCAAACATTTCAGTAGTTATTATTAATTGCACCATAAGTTAA 1197 0.3818 MGTEKLRSCANFLENSMPYFAMILLQFGYAGMNVIAKLSLNGGMSHYVLVVYRHAIATIAIAPFAIIFERKAQPKITFPIFIQIFLLALLGPVIDQNLYYAGLKLTSPTFSCAISNMLPAMTFVIAVLCRMEKINMKKLRCQAKVIGTMLTVAGAMLMTLYKGPIVELFWTKDTLHSKNNTSNITTSSSKDTWLLGSTLLIISTLAWASLFVLQAKAIETYKNHQLTLTSLICFFGTLLAFATTLVMEQKASVWTIGWDMNLLASAYGGIVASSISYYVQGLVIKKKGPVFATSFSPLMMIIVAIMGSFFLAEHIFLGSAIGSILVVTGLYSVLWGKHKEQVEMKVAPDDEKPLPTKSARLNGNIGKLSESIDQLSEAKSFQKVEPNISVVIINCTIS* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4776 398 Pfam EamA-like transporter family 195 334 IPR000620 GO:0016020|GO:0016021
Tpr3g4776 398 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020|GO:0016021
Tpr3g4776 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 339 - -
Tpr3g4776 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Tpr3g4776 398 PANTHER WAT1-RELATED PROTEIN 12 374 - -
Tpr3g4776 398 PANTHER WAT1-RELATED PROTEIN 12 374 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4776 Tpr-Chr3 52700167 52704958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4776 1 375 Nodulin-like Gene Family AT5G07050 66.230 1.01e-178 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4776 - - gmx:100799947 561.607