Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4772 ATGCTAAGTGGATGGAGTTATGATGTGTTCCTTAGTTTTAGAGGTGAAGATACAAGAAGAAGTTTCACAGGCTCTCTCTATCATGGTTTATGCCAAAAGGGCATCAATGTTTTCATAGATGATGAAGAGCTTAGAAGAGGAGAACAAATATCTCCATCTCTTCTAACAGCAATTGAAGAATCTAGAATTTCTATCATTGTGTTTTCTACAAACTATGCATCTTCAAGTTGGTGTCTTGATGAGCTTGTTAAGATTCTTGAATGTTGGAAAACAAAGGGACAATTAGTTTTTCCAGTTTTCTACTATGTTGACCCTTCTTTTGTAAGGCATCAAAGAGGAAGTTTTGGAACAGCAATGGCTAAACATGAAGTTACATTCAAGGATGATGTTGAAAAGTTGAAAAAGTGGAAAAAAGCCTTGTTTGATGCAGCCAATTTTTCAGGTTGGAGCTTAGAAAATGGGTATGAATTTGAGCTTATCTTAAGGATCATTGAGGAGGTCTCTAGCAAACTAAATCACACCCTTTTGCATATTGCTGAGCATCCAGTTGGACTAGAAACTCGCATATCGGAAGTGAAATCACTTCTGCAAACTGAAAATCTTGGTGAACAGGTTTCTTTCATTGGAATCCATGGACTTGGAGGTATAGGAAAAACAACAATTGCAAGAGCATTGTACAACTCAATTGCTAATCAATTTGATGCCACAAGTTTCCTTACTGATATAAGAGAAAGTTCAACTCAAAGACAAGGCTTAGTTCAACTTCAAGAAACACTTCTTTATGAAACACTTGGTATAAAGAATATTATGCTAGGAAATGTTTATAAAGGTATCCCTATTATAAAAAAGAGATTATGTGGCAAGAAAGTGCTTCTGATTCTTGATGATGTCGACAAGTTGGAACAGCTTCAAGCATTAGCAGGAGGACGCGATTGGTTTGGTTTCGGAAGTAAAATAATCATAACAACAAGAGATAAGCAATTATTAGCTAATCATCAAGTTGACAAAACTTATGAAGTAAGGAAACTAAATCACGAAGAAGCTTTTGAACTTTTTACATGGAATGCATTCAAAAGAAAAGCAATTAATGAGGGCTATATGGAGATTTCCAATAATGTTGTACTCTATGCTGAAGGACTTCCATTAGCTTTGAAAGTAATGGGATCAAATTTGTTTGGTAAAACAGTTGAGGAATGGAAATCTGCATTGGCAAAATATGAAAAAATTCCTAATAAAGAGGTTCAAAATGTGCTTAGAGTAACTTTCGATAATTTAGAAGAAAATGAGAAGGAAATTTTCTTGGATATAGCATGTTTCTTCAAGGGAGAGACAGTTGAATATGTCGAAAAAACACTTCAAGCTTGTGGTTTTTTTCCGAAATTTGGTATCAGTGTACTTACCGATAGGTCTCTTGTAAGTATCGATGAATATAACAGATTGAGAATGCATGATTTGATACAAGACATGGGTAGGGAAGTTGTTAGAGAAGTTTCTCCGTTAGAGCCTGGAAAACGGAGTAGGTTATGGAATCATGAAGATGTTATTGAAGTACTAACCGAAAGTTCGGGGACTTATAGTATTCAAGGCATGATGGTGGATCTACCTGATCAATATATGGTACACTTGAAAGATGATTCCTTCAAAAAGATGACAAATCTTAAAATTCTTATAGTTAGAAATGGAAACTTTTATGGAAGCCCTCAACATCTTCCAAACAATTTAAGGTTGCTTGATTGGGTGGAATATCCTTCATCATCTTTACCATCAACGTTTCATCCAAAGAAACTTGTTGTACTCAATTTGTCGCGCAGTCATTTTACAATGCAAGAGCCATTCAAGCATTTGGATTCTTTGACTTCTATGGATTTGAGTCATTGTCAGTTCTTAACAAAGCTACCAGACATTTCTGCTGCTCCAAATTTAACCGAACTAAATCTTGACTATTGTACAAATCTAGAACAAGTTCACGACTCAGTTGGATTTCTTGACAAACTTATTGAGTTAAGGGCTTATGGATGCACTAAGCTTAAGGATTTTCCACATGCCATCAAATTGACATCATTGCGAAGTCTAATTCTTAATTGGTGCTCAAGTCTTCAAAAATTCCCAACCATTTTGGAGAAAATGGAAAATCTCATATCTATTTCCATTGAAGGAACTGCTATTGAAGAATTGCCTCCTTCCATTGGAAATCTTGTTGCTCTTCAAGAGTTTAGCATGACATCTTGCTTGAGCCTCAAGGAACTCCCAGAAAACATTGACATGTTGCATAATCTTAAAAACCTTGATATTGAAGGTTGTCCACAACTTAGAAGTTTTTTGACAAAATTGAGAGAATTAGGACAATCTACTCTTACTTTTGGTAATGTTCAATCGTTGAATCTAGAAAACTGTGGTCTTATAGATGAAGATCTTCCCATAATTTTCAAGTGTTTCCCAAATTTATCATCATTAGTCCTTTCAGGAAGTAATTTTGTAACTCTTCCAAGGTGCATAGAAGAATATTATCCCTTGGAATTGCTTCACTTAGACAACTGCAAACAGCTCCAAGAAATTCCAAGCCTTCCTCCCAATTTACAATTCATCAATGCAAGGAACTGCATATCATTGACTGCAGAATCATCAAACTTATTAATACGCCAGGAAACTTTTGAGGTATATGAGTTACAAGTTATGGTTCCTGGAACAAGGGTTCCAGAATGGTTTGACCACATAACCAAAGGAGAATATATGACCTTTTGGGTGAGAAAAAAATTTCCAGCAATTATTTTATGCTTTGCTCTTGCAATAGAGAGTAAAATGAAGAAGAGTTTCAGCTGCGAAATCCGATTCTATATAAACAGTGAAGAAGTTTATGAATTGGAAATACCAATAATGTTTTCAGAACTAGTGACAGATCATGTATGGCTTTCTGATTTGAGGACTCATCCATCCATCAGATTGAATGACCTTGAATCATATCTTGTTGATGATGATTGGAATCAGATTGAGATTTCATGTGAAAAAGTAATTGGACCATCAAATATGACTATAAGCTCGTGCGGAGTTCATGTATGCAAGCAAGAAGCTAACTTGGAAGATATTCTATTTGAAGATCCTTATCTTGATTCAGATTTAAGCAGAGAAACTGAGAATATTGATTCTGATTTGGAAGATTATAATCAAGAAAAGATTTTATTGCATACCGAAACATTGGTTAATGTTACTGAAGATTCAATGGATATAGTGTGTTTTGATGGCACCAATGTTGTCAAAGCATCAAACATGGCAGCTTCTGATCATCAAGAAAAACCTCAACAAAAATCCGAAGTCACAAATCCGGATGATGAAGACATGGAAGCATTTTATGCTATTCTTGATGCTGAGACCTCAGTTCTTTCACTTTCCAATGACAACAAAGTGGTTTCTGAATCATCCAAAAGAATAATTCCAAGTGAAGAAACCAAGAAAGCTTTGAAGACACTTCAAGATTTTCTCACCAAAGATTTTTCTGTTCTTTTAAGGCCTAATGAGTACAATATCATGGAATCTACCTTAGATTACCTCACACATTTACCTTCAGAAGATGGAATGTCAGTTGAAATAAGATCATTGGTTAAAGAAGTTTCAAGACAGTTCACTTGTTGGAGTTATGATTACAAACACGAAGGCGAGAAAATAGAGTTTACAAAAGCCAAATTGTTGAAAAGTGATGAACTTGAAGAGGGTCTTGAAGCTAACAAAACCCTTTTTAGAGAAGTTAAGCATTTGGAAAATGAGTTATGCAATGAGTTGCAATATTTAGAGGAAAGAAAGAAGATGCTAGAAGAACAAATAAATGCTGTTAGGGCTAATATATCTGCTTCACAAGTAGCTAAGAACATAGCTTCTCATACAAAGAGAGAAATCTTTGAGAATGCAAAGATTCTAAAAGTTCAAAGAGATGAGTTAAGGGAACAAGTACATTGTTTGAGAGATGAATGA 3963 0.35 MLSGWSYDVFLSFRGEDTRRSFTGSLYHGLCQKGINVFIDDEELRRGEQISPSLLTAIEESRISIIVFSTNYASSSWCLDELVKILECWKTKGQLVFPVFYYVDPSFVRHQRGSFGTAMAKHEVTFKDDVEKLKKWKKALFDAANFSGWSLENGYEFELILRIIEEVSSKLNHTLLHIAEHPVGLETRISEVKSLLQTENLGEQVSFIGIHGLGGIGKTTIARALYNSIANQFDATSFLTDIRESSTQRQGLVQLQETLLYETLGIKNIMLGNVYKGIPIIKKRLCGKKVLLILDDVDKLEQLQALAGGRDWFGFGSKIIITTRDKQLLANHQVDKTYEVRKLNHEEAFELFTWNAFKRKAINEGYMEISNNVVLYAEGLPLALKVMGSNLFGKTVEEWKSALAKYEKIPNKEVQNVLRVTFDNLEENEKEIFLDIACFFKGETVEYVEKTLQACGFFPKFGISVLTDRSLVSIDEYNRLRMHDLIQDMGREVVREVSPLEPGKRSRLWNHEDVIEVLTESSGTYSIQGMMVDLPDQYMVHLKDDSFKKMTNLKILIVRNGNFYGSPQHLPNNLRLLDWVEYPSSSLPSTFHPKKLVVLNLSRSHFTMQEPFKHLDSLTSMDLSHCQFLTKLPDISAAPNLTELNLDYCTNLEQVHDSVGFLDKLIELRAYGCTKLKDFPHAIKLTSLRSLILNWCSSLQKFPTILEKMENLISISIEGTAIEELPPSIGNLVALQEFSMTSCLSLKELPENIDMLHNLKNLDIEGCPQLRSFLTKLRELGQSTLTFGNVQSLNLENCGLIDEDLPIIFKCFPNLSSLVLSGSNFVTLPRCIEEYYPLELLHLDNCKQLQEIPSLPPNLQFINARNCISLTAESSNLLIRQETFEVYELQVMVPGTRVPEWFDHITKGEYMTFWVRKKFPAIILCFALAIESKMKKSFSCEIRFYINSEEVYELEIPIMFSELVTDHVWLSDLRTHPSIRLNDLESYLVDDDWNQIEISCEKVIGPSNMTISSCGVHVCKQEANLEDILFEDPYLDSDLSRETENIDSDLEDYNQEKILLHTETLVNVTEDSMDIVCFDGTNVVKASNMAASDHQEKPQQKSEVTNPDDEDMEAFYAILDAETSVLSLSNDNKVVSESSKRIIPSEETKKALKTLQDFLTKDFSVLLRPNEYNIMESTLDYLTHLPSEDGMSVEIRSLVKEVSRQFTCWSYDYKHEGEKIEFTKAKLLKSDELEEGLEANKTLFREVKHLENELCNELQYLEERKKMLEEQINAVRANISASQVAKNIASHTKREIFENAKILKVQRDELREQVHCLRDE* 1321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4772 1320 Gene3D - 170 338 IPR027417 -
Tpr3g4772 1320 PRINTS Disease resistance protein signature 207 222 - -
Tpr3g4772 1320 PRINTS Disease resistance protein signature 284 298 - -
Tpr3g4772 1320 PRINTS Disease resistance protein signature 377 391 - -
Tpr3g4772 1320 PRINTS Disease resistance protein signature 613 629 - -
Tpr3g4772 1320 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1118 1314 IPR044974 GO:0006952
Tpr3g4772 1320 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 1081 IPR044974 GO:0006952
Tpr3g4772 1320 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 149 IPR035897 -
Tpr3g4772 1320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 436 IPR027417 -
Tpr3g4772 1320 Coils Coil 1233 1278 - -
Tpr3g4772 1320 SUPERFAMILY "Winged helix" DNA-binding domain 413 518 IPR036390 -
Tpr3g4772 1320 Gene3D Ribonuclease Inhibitor 532 706 IPR032675 -
Tpr3g4772 1320 Gene3D Ribonuclease Inhibitor 707 887 IPR032675 -
Tpr3g4772 1320 SMART till_3 6 146 IPR000157 GO:0007165
Tpr3g4772 1320 ProSiteProfiles TIR domain profile. 5 171 IPR000157 GO:0007165
Tpr3g4772 1320 Gene3D - 3 169 IPR035897 -
Tpr3g4772 1320 SUPERFAMILY L domain-like 530 876 - -
Tpr3g4772 1320 Pfam NB-ARC domain 187 412 IPR002182 GO:0043531
Tpr3g4772 1320 Coils Coil 1293 1320 - -
Tpr3g4772 1320 Gene3D - 342 426 IPR042197 -
Tpr3g4772 1320 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1118 1314 - -
Tpr3g4772 1320 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 8 1081 - -
Tpr3g4772 1320 Pfam TIR domain 7 175 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4772 Tpr-Chr3 52652571 52667216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4772 7 780 WRKY Transcription Factor Family AT4G12020 31.304 2.80e-95 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4772 - - gmx:100798893 1971.05