Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4768 ATGGCTTCTTCAACAATGGCTCTCTCTTCACCATCATTGGTTGGGAAGGCAATCAAGCTTTCCCCCTCTTCACCAGACCTTGTCATGGGAAGAGTCACCATGAGGAAAACAACCACCAAGAAGACGGTTCCATCTGGAAGTCCGTGGTACGGTCCAGACCGTGTCAAGTACTTGGGTCCATTCTCTGGTGAAGCTCCATCCTACCTCACTGGTGAGTTTCCTGGTGACTATGGTTGGGACACTGCTGGACTTTCTGCCGACCCAGAGACATTCGCCAAAAACCGTGAACTTGAGGTTATCCACAGTAGATGGGCTATGTTGGGAGCCTTGGGATGTGTCTTCCCAGAACTCTTGGCCCGCAATGGTGTCAAATTCGGCGAGGCAGTGTGGTTCAAGGCAGGGTCCCAAATCTTCAGTGAGGGTGGACTTGACTACTTGGGTAACCCAAGTCTAGTCCACGCACAAAGTATCCTTGCTATCTGGGCCGTCCAAGTCATCTTAATGGGAGCTGTTGAGGGTTACCGCATTGCTGGCGGACCTCTCGGTGAAGTTGTCGACCCACTCTACCCCGGAGGCAGCTTCGACCCATTGGGCCTTGCTGAAGACCCTGAGGCTTTTGCCGAGTTAAAGGTGAAAGAACTCAAGAATGGTAGGTTGGCTATGTTTTCTATGTTTGGTTTCTTCGTTCAGGCTATTGTCACCGGAAAGGGACCTCTTGAGAACCTTGCCGACCACATTGCTGACCCTGTCAACAACAATGCTTGGGCCTTTGCCACTAACTTTGTCCCCGGAAAGTGA 798 0.515 MASSTMALSSPSLVGKAIKLSPSSPDLVMGRVTMRKTTTKKTVPSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4768 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Tpr3g4768 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Tpr3g4768 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Tpr3g4768 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 265 - -
Tpr3g4768 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4768 Tpr-Chr3 52626328 52627541 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4768 1 265 Chloroplast and Mitochondria Gene Families AT1G29930 88.390 5.48e-174 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4768 K08912 - twl:119999803 496.893