Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4749 ATGCCTTCCAAAACTAACCAAAACGAAAAAGAACTAAAATCACCGTACAAAGTAGAAGAAGAAGAAGAAGACGATGACGAAGAAGTAGAAGAAGAAGTATGGGATGATTGGGAAGGAGATGAAGGAGATTCTGAATTCATCTGTCTTTTCTGTGATTCCAATTTCACTTCTTCCACTTCTTTGTTCCAACATTGTTCTTCAATTCACCACTTTGATTTTCATGCTGTTACAAATTCTCTTCAATTGGATTTCTATGCTTCCTTCAAGCTCATCAATTACATTCGTTTTCAGGTGGCGGAGAGCAGATGTTGGAGTTGTGGGTTAGCTTGTCAGTCCAAACATGATTTGCAGAATCACTTGCATGATGTAACTGACTTCAATAGTATTAAGCCTTTGTGGGATGATGATAGATATCTAAAACCTTTCATGCAAGATGATTCATTACTGTACAACTTTGGTGAATTTGAAGAAGGTGAAGATGAACAAAGTTCAGTCATGGATGAAGATCTTGTGAGGGATTTGAAGAATGCAATTTACGGTGATGATCAAGATGCAGTGAAAAAATTGGTAGTCAATGAGACAGCTTCTGTTTCAGATGACCATTCAAGTTTGCCTAGCTCTTCAGATAAGGAACTTGTTAATGGGAAGGACTCAAGAGGATGTATTTCGTCAATTGATAAGGATCCAGAAGAAGGGTCTTTGACGGGTAATCCTCAGAATCACATTGTAACACATATTAGGAAGGTCAATGAAAGTTATTTTGGATCTTACAGTTCATTTGGCATTCATCGAGAGATGTTAAGTGATAAGGCTAGAATGGACGCTTATGGCCAAGCAATTTTGAAGAATCCCTCTCTGCTAAATGGCGCTGTGGTTATGGATGTAGGTTGTGGAACTGGCATCCTCAGCCTTTTTTCAGCTCAAGCAGGGGCTTCAAGGGTCATTGCAATTGAGGCTAGTGCCAAGATGGCAGCAGTGGCAACTCAGGTTGCAAAAAATAATGGTCTCTTGCTGAGTAAAAGCGAAACTAGAGTCAATGGCAACAACAAAGGAGTTGTAGAAGTGGTTAATGGCATGGTTGAAGAAATTGACAAAATTGTTGAAATTCAACCTCACAGTGTTGATGTATTGTTAAGTGAATGGATGGGGTATTGCTTGCTGTATGAATCCATGCTTGGTTCAGTGCTTTATGCACGTGACCGGTATTTGAAGCCTGGGGGTGCTATTCTTCCCGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGGTACAAGTCTTCCATTTTGGGAGAATGTGTGTGATTTTGACATGTCTTGCATTGGGGAGGAGCTTGTCACAGATGCTGCCCGATATCCTATAGTTGATGTCATAGACCATCAAGATTTAGTTACCGGTTCTACTATTCTTCAGACCTTTGACTTGGCTACCATGAAGCCCCATGAAGTGGATTTCACTGCAACAGCTTCTTTGGAACCAAAATTGAGTGCTTCAGAAGATGAAAAAACACATTTGAATTCTAAAACATGCTGCTTGTGCTATGGAGTTGTCTTATGGTTTGATACTGGATTTACAACTAGATTCTGCCAGGAAACACCAACTGTGCTGTCAACATCCCCGTACACTCTGAAAACACATTGGTCACAGACAATATTAACCTTTCGGGAACCGATTGCCATTGGATTAGGCAAAGAAAACGGGATAAATTCGGAAACGGTTGGCACTGAAGGCTACCCTGCCGTGAAGATTGATTTGCGTATCAGCATTGTCCGTTCTACTGAGCATCGTACTATCGACATTTCCATGGAAGCTACTGGTGTTGCTCCCGATGGTCGGAGACGCAGCTGGCCAGCTCAACTTTTTTCATTGCAGTAG 1878 0.4105 MPSKTNQNEKELKSPYKVEEEEEDDDEEVEEEVWDDWEGDEGDSEFICLFCDSNFTSSTSLFQHCSSIHHFDFHAVTNSLQLDFYASFKLINYIRFQVAESRCWSCGLACQSKHDLQNHLHDVTDFNSIKPLWDDDRYLKPFMQDDSLLYNFGEFEEGEDEQSSVMDEDLVRDLKNAIYGDDQDAVKKLVVNETASVSDDHSSLPSSSDKELVNGKDSRGCISSIDKDPEEGSLTGNPQNHIVTHIRKVNESYFGSYSSFGIHREMLSDKARMDAYGQAILKNPSLLNGAVVMDVGCGTGILSLFSAQAGASRVIAIEASAKMAAVATQVAKNNGLLLSKSETRVNGNNKGVVEVVNGMVEEIDKIVEIQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRYLKPGGAILPDTATIFVAGFGKGGTSLPFWENVCDFDMSCIGEELVTDAARYPIVDVIDHQDLVTGSTILQTFDLATMKPHEVDFTATASLEPKLSASEDEKTHLNSKTCCLCYGVVLWFDTGFTTRFCQETPTVLSTSPYTLKTHWSQTILTFREPIAIGLGKENGINSETVGTEGYPAVKIDLRISIVRSTEHRTIDISMEATGVAPDGRRRSWPAQLFSLQ* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4749 625 CDD AdoMet_MTases 292 410 - -
Tpr3g4749 625 ProSiteProfiles Zinc finger C2H2 type domain profile. 46 69 IPR013087 -
Tpr3g4749 625 Gene3D Vaccinia Virus protein VP39 242 411 IPR029063 -
Tpr3g4749 625 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 21 623 - -
Tpr3g4749 625 Gene3D - 413 616 - -
Tpr3g4749 625 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 256 565 IPR029063 -
Tpr3g4749 625 MobiDBLite consensus disorder prediction 197 219 - -
Tpr3g4749 625 MobiDBLite consensus disorder prediction 1 31 - -
Tpr3g4749 625 Pfam C2H2 type zinc-finger (2 copies) 48 122 IPR041661 -
Tpr3g4749 625 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 21 623 IPR025799 GO:0016274|GO:0018216
Tpr3g4749 625 MobiDBLite consensus disorder prediction 197 211 - -
Tpr3g4749 625 Pfam Methyltransferase domain 292 407 IPR041698 -
Tpr3g4749 625 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 250 582 IPR025799 GO:0016274|GO:0018216
Tpr3g4749 625 SUPERFAMILY beta-beta-alpha zinc fingers 30 163 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4749 Tpr-Chr3 52448896 52453543 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4749 19 624 C2H2 Transcription Factor Family AT3G12270 54.088 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4749 K11436 - gmx:100778113 855.129