Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4744 ATGGCATTTGTTGGAGAAGCATTCCTCTCAGCTTCTTTGGAAGTATTATTAGAGAGAATCATTTCTCATGAGTTCCAATACTTTTCTAGAAACAAAGAACTTCTTGATGTTTCACTCCTCAAAAAGCTGAAAATAACACTGTTGAGTCTTCAAGCTGTGATGAATGATGCTGAGGAGAAACAAATCACTAACCCTGCTGTTAAACAATGGCTGGATGAACTCAGAGATGCTCTCTATGATGCTGATGATTTGTTGGATGAAATCAACTTTGAGTCATTGAGATGCAAATTGGAAGCTGAGTCACAAATTCAACAACCCTTTAGTGATCAGGTTTTGAATTTCCTTTCTTCTCCTTTCAAAAGTATTTTTAATGTTATTAATTCTGAAATACAAGATATTTTTCAAAGATTGGAACAATTTGCATTGCAAAAAGATATCCTTGGATTGAAACAAGGTGTTTGTGGAAAAATTTGGCATGGAATACCTACTAGTTCTGTTGTAGATGAATCTGCTATTTATGGAAGAGACGATGATAAAATGATACTGAAAGATTATTTGATGTCAGAAAATGATGGTAGTAAAATAGGAGTGATATCCATTGTTGGTATGGGAGGGATTGGAAAAACAACACTTGCTAAACTCCTTTACAATGATCATGATGTAGTAGAGAAATTTGACTTAAAAGCTTGGGCATATATATCAAAGGATTTTGATGTTTGTAGGGTGACAAAAATTCTTCTTGAATGTGTCGGTTCAAAGCCGGTTGTCACGGATAACTTGAATACTCTGCAAGTGGAATTACAGCAAAGCTTGAGAAACAAAAGATATTTGCTTGTTTTGGATGATGTCTGGAATGGAAGTTATGACGATTGGAACAAACTGAAGGGAGTTTTCAATGTCGGTGAAATGGGAAGTAAGATCGTCATCACAACACGGGATGAAAGTGTTGCATTATCTATGCAAACCTATCTTCCTGTCCACTATTTGAGATCTCTTCATAGTGAAGATTGTTGGTCTTTACTTGCACATCACGCATTTGGACCGAATAACTGCAGGGAACAATCGAAACTTCAAGTAATTGGCAAAGAAATTGTGAAAAGATGTGGTGGCTTGCCGTTAGCTGCTGAAGCTGTTGGGGGTCTTCTACGCACCAAATTATCGGAAAAAGAGTGGAATAAGGTATTAAAAAGTAACATATGGGATTTGCCAAATGTCAAGGTACTACCGGCTTTGCTATTGAGCTATCACTATCTTCCTGCTCCATTGAAACGGTGTTTTGCTTATTGTTCAATTTTTCCAAAGAACTTCGGTTTAGATAAGAAAATGGTGGTTCTGCTATGGATTGCAGAAGACTTGGTACATCAGTCCAAAGGTGAAAAAACTATGGAAGAAGTAGGTGAAGAATACTTTGATGAACTTGTATCACGGTCTCTAATACGTAGACAGATTGTCAATGAAAACGAAAACTTTGTGATGCATGACCTTATCAACGAATTAGCGACAATTGTTTCATCTGGATATTGTATCAGGCTTGAGGATCCAAAGTCATGTGAAAGTCGTGAAAGAGCTCGTCATTTGTCGTACATTCGAGGGAAGTATGATTGCTTCAATAAATTCAATACGATTCATGAATCAAAGCGTCTTCGTACCTTACTAGCCTTACCATTAAGACATTGGTGGTCATCAAAATATCCTAATCTGAGAAGCCATTATCTATCAAGCAAGTTACCATTTGACTTGTTACCTGAAAGGAAACGGTTGAGGGTGTTATCTTTGTCACACTATACCAATATCACCGAGTTGCCTAACTCTCTTGGAAATTTAATACATCTGCGTTATTTAGATCTCTCCAACACTAAAATTGAAAGACTGCCAGATGTAATATGCAAGCTTTACAATCTACAAACCTTATTATTGTCGAGATGTTACTCGCTTACTGAATTGCCTGAGGACATTGGAAATTTGGTCAATCTACACCACCTTGATTTAAGTGGCACTAAGTTGAAGAAGATGCCTATACAAATAACCAAACTACAAAATCTTCAAACATTGTCTTCATTTGTTGTCAGCAAAAAACCAGACGGGTTGAAGATTGGAGAGCTGAGAAAATTTCCACATCTTCAAGGGAAACTGTCAATCTCAAAGCTACAAAATGTTACTGACCTCTTTGATGCCATTCAAGCCAACTTGGAGAAAAAAGGAGAAATTCATGAGTTGACATTAGAATGGGATCATGATACCACAGAAGACTCGCAAATGGAAAGGCTTGTACTTGAACAGTTGCAGCCCTCAACAAATTTGAAGAAACTCACAATCCAATTCTTTGGTGGAACCAGCTTTCCTAATTGGTTAGGAGATTCCTCATTTCGCAACATGATGTATTTGCGCATCAGTGGTTGTGATCATTGTTGGTCACTCCCTCCCCTTGGAGAATTACTTAGTCTCAAAGAACTCATCATTTCTGGACTAAAATCAGTGAAGACGGTTGGTACTGAGTTTTACGGAAGCAATAGTTCCCTTTCCTTTCAATCATTTCCTTCCTTGGAGATTTTGTGCTTTGAGGAGATGCCAGAATGGGAGGAATGGGACTTCGTGATTCGAGAAACTACAACTATAGAGTTTCCTAGTCTAAGGCGTTTGTTTCTATGTGATTGTCCGAAACTCAAAGGAAACATACCAGACAACCTTCCTTCCTTAGTTGAGCTTGAGTTGTCAAAATGTCCTCTACTCAGGACTCAAGAGGTAGATACCAGCATCAGCAGCAGCATTACGATGATTGGAGTTAATTCTCTCAAACAGTTGACTATCTCAGGCATTGTTTCTCCGAGTTCCTTCCCATTACAATTTCTTCCTACAACATTACAATCTCTCACTATCCTTTCTTGCGAGAATCTAGAACTCTTACCTAATGAGTCCTTACCAAGTTACACATCACTTGAGAAATTGCAAATATTCAACAGTTGTGATTCAATGACATCCTTTCAGCTAGACTGTTTCCCAGTGCTCAAAAGTCTTTTCATCTTAGGTTGTAAAAATCTAAAATCTATTTCCGTTGCCGAAGATGATGCATCACGCAGTCATTCCTTTCTTCAAAGTTTATCCATATATGCTTGTCCTAATCTTGAGTCATTTCCACTACATGGACTAAACACTCCTAACCTCAATAATTTCATGGTGTCAAGTTGTCCTAAGCTTAAGTCACTACCTGAACCAATTCACAGTCTATCTAGCCTTTATAATTTGAGTGTGTATGGACTTCCAAAACTGCAGGCTTTTGCACAAGAAAGTTTACCAATTAATTTAAGTATACTTGAAGTGTCAAATTGTGGGAGTTTGTCTACTTCATCTATCACTAAGTGGGGTTTACAATCCCTTACTTGTCTTGTGGAATTGCGAATTCGAGGTGATCGTCTAATGAATTCCTTGATGAAAGCCGAAGGGTCATTGCTTCCGATTTCTCTAGTATCGATACACATCTCTCATCTTTTTTATCTAAAAGACTTAAAAGGGAAGTGGCTTCAGCATCTCACATCTCTTGAAAACCTTGAGATTTCAGATTGTCGCCGGCTTGAATCGTTACCGGATGCACTGCCTTCCTCTCTTTCAGTGCTGACTATCAAACGATGCCTTTTACTACAAGCAAGCTGTCAGAGCAATGGAGGGAAAGAGTGGCCTAAGATTGCACATATTCCTTGCATAATTAATGATAACAAAGTGATTATATGA 3726 0.3795 MAFVGEAFLSASLEVLLERIISHEFQYFSRNKELLDVSLLKKLKITLLSLQAVMNDAEEKQITNPAVKQWLDELRDALYDADDLLDEINFESLRCKLEAESQIQQPFSDQVLNFLSSPFKSIFNVINSEIQDIFQRLEQFALQKDILGLKQGVCGKIWHGIPTSSVVDESAIYGRDDDKMILKDYLMSENDGSKIGVISIVGMGGIGKTTLAKLLYNDHDVVEKFDLKAWAYISKDFDVCRVTKILLECVGSKPVVTDNLNTLQVELQQSLRNKRYLLVLDDVWNGSYDDWNKLKGVFNVGEMGSKIVITTRDESVALSMQTYLPVHYLRSLHSEDCWSLLAHHAFGPNNCREQSKLQVIGKEIVKRCGGLPLAAEAVGGLLRTKLSEKEWNKVLKSNIWDLPNVKVLPALLLSYHYLPAPLKRCFAYCSIFPKNFGLDKKMVVLLWIAEDLVHQSKGEKTMEEVGEEYFDELVSRSLIRRQIVNENENFVMHDLINELATIVSSGYCIRLEDPKSCESRERARHLSYIRGKYDCFNKFNTIHESKRLRTLLALPLRHWWSSKYPNLRSHYLSSKLPFDLLPERKRLRVLSLSHYTNITELPNSLGNLIHLRYLDLSNTKIERLPDVICKLYNLQTLLLSRCYSLTELPEDIGNLVNLHHLDLSGTKLKKMPIQITKLQNLQTLSSFVVSKKPDGLKIGELRKFPHLQGKLSISKLQNVTDLFDAIQANLEKKGEIHELTLEWDHDTTEDSQMERLVLEQLQPSTNLKKLTIQFFGGTSFPNWLGDSSFRNMMYLRISGCDHCWSLPPLGELLSLKELIISGLKSVKTVGTEFYGSNSSLSFQSFPSLEILCFEEMPEWEEWDFVIRETTTIEFPSLRRLFLCDCPKLKGNIPDNLPSLVELELSKCPLLRTQEVDTSISSSITMIGVNSLKQLTISGIVSPSSFPLQFLPTTLQSLTILSCENLELLPNESLPSYTSLEKLQIFNSCDSMTSFQLDCFPVLKSLFILGCKNLKSISVAEDDASRSHSFLQSLSIYACPNLESFPLHGLNTPNLNNFMVSSCPKLKSLPEPIHSLSSLYNLSVYGLPKLQAFAQESLPINLSILEVSNCGSLSTSSITKWGLQSLTCLVELRIRGDRLMNSLMKAEGSLLPISLVSIHISHLFYLKDLKGKWLQHLTSLENLEISDCRRLESLPDALPSSLSVLTIKRCLLLQASCQSNGGKEWPKIAHIPCIINDNKVII* 1242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4744 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 429 IPR027417 -
Tpr3g4744 1241 PRINTS Disease resistance protein signature 197 212 - -
Tpr3g4744 1241 PRINTS Disease resistance protein signature 270 284 - -
Tpr3g4744 1241 PRINTS Disease resistance protein signature 368 382 - -
Tpr3g4744 1241 PRINTS Disease resistance protein signature 894 910 - -
Tpr3g4744 1241 SUPERFAMILY L domain-like 491 911 - -
Tpr3g4744 1241 Pfam NB-ARC domain 182 396 IPR002182 GO:0043531
Tpr3g4744 1241 PANTHER - 50 916 - -
Tpr3g4744 1241 Gene3D Ribonuclease Inhibitor 866 1233 IPR032675 -
Tpr3g4744 1241 Gene3D - 17 127 - -
Tpr3g4744 1241 Pfam Leucine Rich repeats (2 copies) 585 626 IPR025875 -
Tpr3g4744 1241 Coils Coil 40 60 - -
Tpr3g4744 1241 Pfam Rx N-terminal domain 8 102 IPR041118 -
Tpr3g4744 1241 Gene3D Ribonuclease Inhibitor 536 865 IPR032675 -
Tpr3g4744 1241 Gene3D - 414 501 IPR036388 -
Tpr3g4744 1241 PANTHER DISEASE RESISTANCE PROTEIN RP 50 916 IPR044974 GO:0006952
Tpr3g4744 1241 SUPERFAMILY L domain-like 921 1228 - -
Tpr3g4744 1241 SMART LRR_typ_2 608 631 IPR003591 -
Tpr3g4744 1241 SMART LRR_typ_2 655 678 IPR003591 -
Tpr3g4744 1241 Gene3D - 158 324 IPR027417 -
Tpr3g4744 1241 ProSiteProfiles Leucine-rich repeat profile. 610 631 IPR001611 GO:0005515
Tpr3g4744 1241 Gene3D - 331 413 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4744 Tpr-Chr3 52406854 52411192 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4744 596 692 WRKY Transcription Factor Family AT4G12020 41.837 2.91e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4744 - - ccaj:109806283 1516.13