Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4743 ATGAAAATCCCTTGTTGTTCGGTGTGCCAAACGCGGTACAACGAAGAAGAACGAGTTCCTCTTCTTCTTCAATGTGGCCATGGTTTCTGCAGAGAGTGTCTTTCTAGAATGTTCTCAGCTTCATCAGACGCTACTCTCACCTGTCCACGGTGTCGTCATGTATCAACCGTCGGTAATTCTGTTTTAGCTTTACGGAAGAACTATGCGGTGCTTTCGTTAATCCATTCCGCCGTGGAAGCTTCTGCTGCCGCTTCCGGTGGCGGCAACCGAGGTTCGAATTTTGAATGTGATTTAACTGACGATGATGAAGACGGTGATGGTGAAGATGACGACGAGAATGATGAGGAGAAACGGCGGCGGAACAGTCGTGGCTCGCAGACTTCGAGTTCTGGTGGTTGTGCTCCGGTGATTGAGGTCGGTGTGCATCAGGATTTGAAATTAGTGAAGCGGATTGCGGAAGGAAGGAGAGCTGGTGTTGATATGTGGACGGCGGTGATCGGAGGTGGACGGTGTCGGCATCATGTGGCGGTGAAGAAAGCGGTTATAACTGAGGGAATGGATTTGGATTGGATGTTAGTGAAATTGGAGGATTTGCGTAGGGCTTCGATGTGGTGTAGAAATGTTTGTACTTTTCATGGTGCGATGAAGGTTGATGAAAGTTTGTGTCTTGTGATGGATAAATGTTATGGATCGGTTCGCTCCGAGATGCAGCGGAATGAAGGAAGACTCACATTGGAGCAAGTTTTAAGATATGGAGCAGACATTGCACGAGGGGTTGTTGAGCTTCATGCTGCAGGCGTTATTTGCATGAATTTAAAGCCTTCCAATCTACTTCTTGATACAAATGGTCATGCTGTGGTTTCTGATTATGGACTTGCTACAATTCTGAAGAAGCCTTCCTGTTGGAAGGCTCGACCTGAGTGTGACTCCACAAAGATCCATTCCTGTATGGAATGTATAATGCTTAGCCCACATTATACAGCACCAGAGGCTTGGGAACCTGTGAAGAAGTCATTAAATTTGTTCTGGGATGATGGAATAGGTATATCTCCCGAATCAGATGCCTGGAGTTTTGGTTGTACATTGGTGGAGATGTGCACGGGTGCAATTCCTTGGGCTGGTTTAAGTGCAGAGGAAATCTATCGAGCAGTTGTCAAGGCAAAGAAGCAGCCTCCACAATATGCTAGTGTGGTTGGTGGAGGAATTCCAAGGGAACTGTGGAAGATGATTGGAGAGTGCTTACAATTCAAACCATCTAAAAGACCTACCTTCAATGCAATGCTGGCAATATTTCTCCGTCATTTGCAAGAAATACCACGCAGCCCTCCTGCAAGCCCGGATAATGACCTTGTTAAGGGGTCTGTATCAAATGTGACAGAGGCTTCCCCAGTACCTGAATTAGAAGTCCATCAGGACCCAAATCATCTTCATCGACTTGTGTCTGAAGGGGATGTCACTGGTGTTAGAGACTTTCTGGCAAAGGCTGCAACAGAAAATGAAAGCAACTACATGTCTTCTCTGTTGGAAGCTCAAAATGCTGATGGACAAACGGCTCTCCACTTGGCTTGTAGACGTGGCAGTGCAGAACTTGTTGAGACAATTCTGGAGTATGAAGAGGCTAATGTTGATGTCTTGGACAAAGATGGGGATCCTCCTCTTGTTTTTGCCTTAGCAGCTGGGTCCCATGAATGTGTGCGTAGCCTTATCAAAAGAAATGCTAGTGTGAAGTCACGATTGAGAGATGGGTTTGGCCCATCAGTAGCTCATGTTTGTGCATATCATGGTCAGCCAGATTGTATGCGAGAGTTGCTTTTAGCTGGAGCTGATCCCAATGCAGTGGATGATGAAGGTGAATCAGTACTGCATAGGGCAATTGCCAAGAAGTTCACAGACTGTGCTCTTGTGATAGTGGAAAATGGAGGCTGTAGATCGATGACCATCTTGAATTCAAAAAATCTGACACCACTGCACTTGTGTGTAGCGACGTGGAATGTTTCTGTTGTGAAGAGATGGGTGGAAGTTGCAACTTCTGATGAGATTGCTGAAGCGATTGACATACCAAGCCATATCGGCACTGCCTTGTGCATGGCAGCTGCTTCTAAGAAAGACCATGAAAGTGAGGGGAGAGACTTGGTGCGGATATTGCTTACAGCAGGAGCTGATCCATCTGCTCAGGATTCACAGAACGGGAGGACAGCTTTGCATACCGCTGCTATGACAAATGATGTGGAATTGGTTCAGGTTATTCTTGCTGCTGGTGTTGATGTTAACACTCGCAATGTGCACAATAGTATACCTCTTCACTTGGCCTTAGCTAGGGGTGCAAAGGCATGTGTTGGACTGCTTCTAGATGCTGGAGCGGATTATAATTTGCAGGATGATGATGGTGATAATGCTTTCCATATAGCAGCAGAAACAGCAAAAATGATACGCGAAAATCTGGACTGGCTTATTGTTATGCTAAAGAATCCCGATGCTGATATTGAAGTCAGAAACCACAGTGGCAAGACACTACGGGACATCTTAGAGGCTCTACCCCGAGAATGGATATCCGAAGATTTGATGGAGGCACTCTCAAATAGAGGCGTTCATTTATCTCCTACAATATTTGAAGTGGGAGATTGGGTGAAGTTTAAAAGAACTGTCACAACTCCAACACATGGGTGGCAAGGTGCTAGACCAAAGAGTGTTGGCTTTGTGCAAAGTATTCCAGACAGGGATAATCTAATCGTTTCATTTTGTTCGGGAGAGGTTCATGTTCTGCCAAATGAAGTTGTAAAAGTTGTTCCATTGGACAGGGGGCAACATGTACAACTGAAAGGAGATGTAAAAGAGCCTAGGTTTGGTTGGCGTGGGCAGTCACGTGACAGCATTGGGACAGTATTATGTGTTGACGATGATGGAATTCTCCGTGTTGGGTTTCCTGGTGCATCCAGAGGATGGAAAGCTGACCCAGCAGAGATGGAACGTGTTGAGGAATTCAAGGTTGGAGATTGGGTTCGTATTCGTCCAACTCTTACATCTGCAAAACATGGGTTAGGAGCTGTGACACCAGGAAGCATTGGCATTGTATATTGTATCCGACCTGACAGTAGTCTGTTAATTGAACTGAGCTATCTTCCAAATCCTTGGCATTGTGAACCAGAGGAGGTTGAGCATGTTCCTCCTTTTAGGATTGGGGATAAGGTATGTGTGAAGCGATCTGTCGCAGAACCTAGATATGCTTGGGGTGGTGAGACACATCATAGTGTTGGAAGAATAAGTGAGATTGAGAACGATGGTCTCTTAGTAATAGAAATACCAAATCGACCCATACCATGGCAAGCTGATCCATCTGATATGGAGAAGGTGGAAGATTTTAAGGTTGGAGATTGGGTCAGAGTGAAAGCTTCAGTATCTTCTCCAAAATATGGATGGGAGGATATTACAAGGAACAGTATTGGGGTAATTCATAGTTTGGAGGAGGATGGTGATGTGGGTGTTGCCTTTTGCTTCAGAAGCAAGCCTTTTTCTTGCTCAGTCACTGATGTGGAGAAAGTTCCTCCTTTTGAGGTGGGACAAGAAATTCATGTGATGCAATCTGTTAGTCAGCCACGGCTTGGGTGGTCAAATGAATCACCAGCTACTGTTGGAAAAATAGTGAGAATTGACATGGATGGTGCCCTCAATGCAAAGGTCACCGGTAGGCAGAGCTTGTGGAAAGTGTCTCCTGGAGATGCTGAACGACTTCCAGGGTTTGAGGTTGGGGATTGGGTACGCTCTAAACCAAGCCTGGGAAATAGACCTAGTTATGACTGGAATAGTGTTGGCAGAGAGAGTTTAGCTGTTGTGCATAGTGTACAGGATTCTGGTTATTTGGAGTTGGCTTGCTGTTTCCGTAAAGGGAAGTGGATCACTCATTATACGGATGTTGAAAAGGTTCCTAGCTTGAAAGTTGGGCAGTATGTTAGTTTCCGAGTTGGTTTGGTTGAACCCAGGTGGGGTTGGAGAGGAGCTCAGCCTGAATCTCAAGGTATTATAACAAGTATTCATGCGGATGGAGAAGTCAGGGTTGCATTCTTTGGTTTGCCAGGACTGTGGAAAGGCGATCCTTCGGACCTGCAGGCAGAACAAATCTTTGAAGTGGGAGAGTGGGTGAGATTGAAAGAAAATGCAAATAATTGGAAATCAATTGGGCCAGGTAGTGTTGGCGTCGTTCAAGGAATAGGGTATGAAGGAGATGAAACTGACAGAAGTACTTACGTAGGCTTTTGTGGGGAGCAAGAGAAATGGGTAGGACCAAGTTCCCATCTTGAAAGAGTTGACAAACTCTTTGCAGGGCAGAAAGTTAGAGTTAAACAATATGTAAAGCAACCTAGATTTGGGTGGTCGGGGCACACCCATGCTAGTATTGGTACTATACAAGCAATTGATGCTGATGGGAAGCTTCGAATATACACTCCAGCAGGTTCAAAAACATGGATGCTGGACCCATCAGAAGTGGACGTCGTGGAAGAGAAGGAGCTTTGTATTGGAGACTGGGTGAGGGTTAGAGCATCAGTTTCAACTCCAACCCACCATTGGGGGGAAGTGATTCATTCAAGCGTGGGGGTGGTGCATCGGATGGAAGATGATAATTTATGGGTTTCATTCTGTTTTGTGGAGAGATTATGGCTTTGCAAGGCAAGCGAAATGGAACGGGTTAGGCCTTATAAAGTAGGGGACAAAGTAAGGATCAGAGATGGACTGGTATCGCCGCGGTGGGGATGGGGGATGGAGACACATGCCAGCAGGGGACAGGTTGTAGGAGTAGATGCAAATGGTAAACTAAGAATAAGGTTCCGTTGGAGGGAAGGTAGGCCTTGGATAGGAGACCCTGCTGATATTGCCCTTGATGAGAACTGA 4884 0.4586 MKIPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFSASSDATLTCPRCRHVSTVGNSVLALRKNYAVLSLIHSAVEASAAASGGGNRGSNFECDLTDDDEDGDGEDDDENDEEKRRRNSRGSQTSSSGGCAPVIEVGVHQDLKLVKRIAEGRRAGVDMWTAVIGGGRCRHHVAVKKAVITEGMDLDWMLVKLEDLRRASMWCRNVCTFHGAMKVDESLCLVMDKCYGSVRSEMQRNEGRLTLEQVLRYGADIARGVVELHAAGVICMNLKPSNLLLDTNGHAVVSDYGLATILKKPSCWKARPECDSTKIHSCMECIMLSPHYTAPEAWEPVKKSLNLFWDDGIGISPESDAWSFGCTLVEMCTGAIPWAGLSAEEIYRAVVKAKKQPPQYASVVGGGIPRELWKMIGECLQFKPSKRPTFNAMLAIFLRHLQEIPRSPPASPDNDLVKGSVSNVTEASPVPELEVHQDPNHLHRLVSEGDVTGVRDFLAKAATENESNYMSSLLEAQNADGQTALHLACRRGSAELVETILEYEEANVDVLDKDGDPPLVFALAAGSHECVRSLIKRNASVKSRLRDGFGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGESVLHRAIAKKFTDCALVIVENGGCRSMTILNSKNLTPLHLCVATWNVSVVKRWVEVATSDEIAEAIDIPSHIGTALCMAAASKKDHESEGRDLVRILLTAGADPSAQDSQNGRTALHTAAMTNDVELVQVILAAGVDVNTRNVHNSIPLHLALARGAKACVGLLLDAGADYNLQDDDGDNAFHIAAETAKMIRENLDWLIVMLKNPDADIEVRNHSGKTLRDILEALPREWISEDLMEALSNRGVHLSPTIFEVGDWVKFKRTVTTPTHGWQGARPKSVGFVQSIPDRDNLIVSFCSGEVHVLPNEVVKVVPLDRGQHVQLKGDVKEPRFGWRGQSRDSIGTVLCVDDDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRPTLTSAKHGLGAVTPGSIGIVYCIRPDSSLLIELSYLPNPWHCEPEEVEHVPPFRIGDKVCVKRSVAEPRYAWGGETHHSVGRISEIENDGLLVIEIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDITRNSIGVIHSLEEDGDVGVAFCFRSKPFSCSVTDVEKVPPFEVGQEIHVMQSVSQPRLGWSNESPATVGKIVRIDMDGALNAKVTGRQSLWKVSPGDAERLPGFEVGDWVRSKPSLGNRPSYDWNSVGRESLAVVHSVQDSGYLELACCFRKGKWITHYTDVEKVPSLKVGQYVSFRVGLVEPRWGWRGAQPESQGIITSIHADGEVRVAFFGLPGLWKGDPSDLQAEQIFEVGEWVRLKENANNWKSIGPGSVGVVQGIGYEGDETDRSTYVGFCGEQEKWVGPSSHLERVDKLFAGQKVRVKQYVKQPRFGWSGHTHASIGTIQAIDADGKLRIYTPAGSKTWMLDPSEVDVVEEKELCIGDWVRVRASVSTPTHHWGEVIHSSVGVVHRMEDDNLWVSFCFVERLWLCKASEMERVRPYKVGDKVRIRDGLVSPRWGWGMETHASRGQVVGVDANGKLRIRFRWREGRPWIGDPADIALDEN* 1628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4743 1627 CDD RING-HC_ScPSH1_like 5 52 - -
Tpr3g4743 1627 SMART ANK_2a 651 682 IPR002110 GO:0005515
Tpr3g4743 1627 SMART ANK_2a 795 830 IPR002110 GO:0005515
Tpr3g4743 1627 SMART ANK_2a 689 724 IPR002110 GO:0005515
Tpr3g4743 1627 SMART ANK_2a 583 612 IPR002110 GO:0005515
Tpr3g4743 1627 SMART ANK_2a 514 544 IPR002110 GO:0005515
Tpr3g4743 1627 SMART ANK_2a 762 791 IPR002110 GO:0005515
Tpr3g4743 1627 SMART ANK_2a 616 647 IPR002110 GO:0005515
Tpr3g4743 1627 SMART ANK_2a 729 758 IPR002110 GO:0005515
Tpr3g4743 1627 SMART ANK_2a 548 577 IPR002110 GO:0005515
Tpr3g4743 1627 SUPERFAMILY Protein kinase-like (PK-like) 142 450 IPR011009 -
Tpr3g4743 1627 SUPERFAMILY RING/U-box 4 76 - -
Tpr3g4743 1627 MobiDBLite consensus disorder prediction 94 131 - -
Tpr3g4743 1627 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Tpr3g4743 1627 Pfam Protein kinase domain 174 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4743 1627 Pfam Ankyrin repeats (3 copies) 705 793 IPR002110 GO:0005515
Tpr3g4743 1627 Pfam Ankyrin repeats (3 copies) 495 576 IPR002110 GO:0005515
Tpr3g4743 1627 ProSiteProfiles Ankyrin repeat profile. 583 615 IPR002110 GO:0005515
Tpr3g4743 1627 Pfam Ankyrin repeats (many copies) 586 633 IPR002110 GO:0005515
Tpr3g4743 1627 ProSiteProfiles Ankyrin repeat region circular profile. 514 536 - -
Tpr3g4743 1627 ProSiteProfiles Ankyrin repeat region circular profile. 762 794 - -
Tpr3g4743 1627 Pfam RING-type zinc-finger 6 49 IPR027370 -
Tpr3g4743 1627 PRINTS Ankyrin repeat signature 515 530 IPR002110 GO:0005515
Tpr3g4743 1627 PRINTS Ankyrin repeat signature 711 725 IPR002110 GO:0005515
Tpr3g4743 1627 SUPERFAMILY Ankyrin repeat 509 806 IPR036770 -
Tpr3g4743 1627 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG-LIKE 2 1626 - -
Tpr3g4743 1627 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 83 IPR013083 -
Tpr3g4743 1627 ProSiteProfiles Ankyrin repeat region circular profile. 729 760 - -
Tpr3g4743 1627 ProSiteProfiles Ankyrin repeat profile. 729 761 IPR002110 GO:0005515
Tpr3g4743 1627 ProSiteProfiles Ankyrin repeat profile. 514 547 IPR002110 GO:0005515
Tpr3g4743 1627 ProSiteProfiles Ankyrin repeat profile. 548 580 IPR002110 GO:0005515
Tpr3g4743 1627 MobiDBLite consensus disorder prediction 97 112 - -
Tpr3g4743 1627 ProSiteProfiles Ankyrin repeat profile. 762 794 IPR002110 GO:0005515
Tpr3g4743 1627 Gene3D - 468 582 IPR036770 -
Tpr3g4743 1627 ProSiteProfiles Protein kinase domain profile. 145 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4743 1627 Gene3D - 771 847 IPR036770 -
Tpr3g4743 1627 Gene3D Transferase(Phosphotransferase) domain 1 228 458 - -
Tpr3g4743 1627 SMART ring_2 6 51 IPR001841 -
Tpr3g4743 1627 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Tpr3g4743 1627 Gene3D - 643 770 IPR036770 -
Tpr3g4743 1627 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 2 1626 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Tpr3g4743 1627 Pfam Mind bomb SH3 repeat domain 1373 1494 IPR040847 -
Tpr3g4743 1627 Pfam Mind bomb SH3 repeat domain 870 988 IPR040847 -
Tpr3g4743 1627 Pfam Mind bomb SH3 repeat domain 1246 1367 IPR040847 -
Tpr3g4743 1627 Pfam Mind bomb SH3 repeat domain 1120 1238 IPR040847 -
Tpr3g4743 1627 Pfam Mind bomb SH3 repeat domain 994 1114 IPR040847 -
Tpr3g4743 1627 Pfam Mind bomb SH3 repeat domain 1503 1621 IPR040847 -
Tpr3g4743 1627 Gene3D - 583 642 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4743 Tpr-Chr3 52392773 52405922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4743 207 428 MAP Kinase Kinase Kinase AT2G31800 30.088 7.44e-17 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Tpr3g4743 Pkinase 5.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4743 K16279 - gmx:100777576 3001.08