Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4740 ATGAATGAAAACAAAGATCAACAAAACCCTCCAACATCACAAGAATCACCAAGAAAACAAAACATTAATATAGGAAGTGGAAGTACTACAAATGAGAGACTAAAAAGAGATGAATGGAGTGAAGGAGCAGTAACAACACTTCTTGAAGCATATGAATCAAAATGGATACTAAGAAACAGAGCAAAACTCAAAGGACAAGATTGGGAAGATGTTGCAAAACATGTTTCATCAAGATCAAACTCAACAAAATCACCAAAGACACAAACACAGTGTAAGAATAAGATTGAGTCTATGAAAAAAAGGTATAGATCAGAATCAGCTAGTTCAGATGTTTCAGCTTGGCCTTTGTATTCAAGACTTGATCTTCTTCTTCGTGGGACAGGACAATTATCTACTACAACAACAGTAGTAGCTTCACAATTGCAACATGTAAGTAGTAATAATAATAATAATAATCATCATGGTTTGGTTTTGTTGGAACCTTCTTCACTTGTTGTGTCACAAGGACAAGAAGAAGCTCATCAGTCACTAGCTCCTACTAGTGTTGCTAATCCACCAATTGCAATTGCTCAAAATTCACATGGATCAAATGGGGTTGATAAATTACCCAAGGAAGATGAGTTAGAAACTAAATCATCTGACCATATAGCTAACAAGAATCCGGTGGACACGGATAGTAGCACGCCCGCGCTTTATAGCGAAAAGGACGAGCAAAGATCGAAAAAGAGGAGAATACGAACAGAGAAGAATAATAACAAGAGACAAAAGAAAGAAGCAATGGGAATAGCTGAAAGCATAAGGTGGCTAGCAGAAGTAGTTGTAAGGTCAGAACAAACAAGAATGGAGACATTGAAAGAGATAGAAAAGATGAGAGTTGAAGCTGAAGCAAAGAGAGGTGAAATGGAAATCAAGAGAACTGAAATTCTTGCTAATACACAACTTGAGATTGCTAGAATATTTGCAAATGTTAATAATAAAGATAAAGATGTTGATTCATCATTGAGAATTGGAAGAAGTTAA 1020 0.3578 MNENKDQQNPPTSQESPRKQNINIGSGSTTNERLKRDEWSEGAVTTLLEAYESKWILRNRAKLKGQDWEDVAKHVSSRSNSTKSPKTQTQCKNKIESMKKRYRSESASSDVSAWPLYSRLDLLLRGTGQLSTTTTVVASQLQHVSSNNNNNNHHGLVLLEPSSLVVSQGQEEAHQSLAPTSVANPPIAIAQNSHGSNGVDKLPKEDELETKSSDHIANKNPVDTDSSTPALYSEKDEQRSKKRRIRTEKNNNKRQKKEAMGIAESIRWLAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIKRTEILANTQLEIARIFANVNNKDKDVDSSLRIGRS* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4740 339 MobiDBLite consensus disorder prediction 1 30 - -
Tpr3g4740 339 MobiDBLite consensus disorder prediction 192 259 - -
Tpr3g4740 339 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 14 335 - -
Tpr3g4740 339 MobiDBLite consensus disorder prediction 230 244 - -
Tpr3g4740 339 MobiDBLite consensus disorder prediction 77 92 - -
Tpr3g4740 339 MobiDBLite consensus disorder prediction 199 218 - -
Tpr3g4740 339 Pfam Myb/SANT-like DNA-binding domain 36 122 IPR044822 -
Tpr3g4740 339 MobiDBLite consensus disorder prediction 1 39 - -
Tpr3g4740 339 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 335 IPR044823 -
Tpr3g4740 339 Coils Coil 284 304 - -
Tpr3g4740 339 MobiDBLite consensus disorder prediction 74 93 - -
Tpr3g4740 339 Gene3D - 39 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4740 Tpr-Chr3 52360952 52363022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4740 26 319 Trihelix Transcription Factor Family AT3G14180 24.629 3.57e-21 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr3g4740 Myb_DNA-bind_4 3.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4740 - - gmx:100799917 405.601