Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4724 ATGGAAGCCCTTGCTGTTACAATCTTGGAAAAATTGAGTTCTTCTGCTTACAAAGAGCTTGGAATCATTTGGAATCTCAAAGAGGATATCGAACGAATGAGGAATACAGTTTCCATGATAAAAGCTGTGCTCCTCGATGCAGAGGCCAAAGCCAATAATCATCAAGTTAGTAATTGGTTGGAGGAGCTGAAAGATGTACTTTATGATGCAGATGATGTGCTAGATGATTTTTCCATCGAAGATTTGAATAGAAAAGTGATGGCTAGAAACAGCATAGTAAGACAGACACAAATTTTCTTCTCAAAATCAAACAAACTTGCTTATGGCCATAAAATGAAGGCAATCCAAAAGAGGCTAGATGACATTGCTAAAATTAAGCATGCACTGCAACTGAATGACCGTCCTATCGAGAATCCAATTGTATATCGGGAACAAAGACAAACTTACTCTTTTGTGAGTAAAGATGAAGTTCTTGGAAGAGATGAGGAAAAGAAATGCATTAAACGTTATCTACTTGACATCAATGCAACAGATAATGTTTCGATAATTCCCATAGTCGGCATTGGAGGCTTAGGTAAGACTGCACTTGCACAATTAGTTTACAATGATAATGATGTTCAAAAGCATTTTGAACTAAAAATGTGGGTGTATGTCTCGGATGAATTTGATATAAAGAAAGTAGCTCAAGATATCATCGGGGACGAAAAGAATAGTAAGATGGAGCTAGTGCAACAAAAACTTAGAAACAAAATTGAAGGGAAGAAGTTTTTGCTTGTGTTAGACGACATGTGGAATGAGGATCGTGAGTTGTGGCTTAAATTGAAGAGCTTGTTCGTGGAAGGAGGAAAAGGAAGCATGATAATTGTTACAACCCGTAGTCATACTGTGGCAAAAATAACAGGCACACATCCACCCCTTTTCTTAAAAGGTTTGGATTCACAGAAATCCCAGGAGCTATTCTCTCGAGTAGCTTTCGGTGAGTTGAAAGAACAAAATGATTTGGAGTTGTTAGATATAGGAAGGGACATTGTTAAGAAATGTGCTGGCATTCCCCTCGCCATAAGAACTATCGGCAGCCTTTTGTTTTCTCGAAATTTGGGAAGAAGAGATTGGCTATATTTCAAGGATGTTGAGTTTTCAAAGATAGATCAACACAAGGACAAAATCTTTGAAATCCTTAAATTGAGTTATGATCATCTTCCCTCATTTCTGAAAAAATGTTTTGCTTATTGTTCATTGTTTCCAAAAGGTTTTGTGTTTGAAAAAAACACACTCATTCAGTTATGGGTTGCTGAGGGTTTCATTCAACAATCAAATGATATTAGATGTGTAGAAGATGTTGGTCATGAGTACTTCATGAGTTTGCTTTCAATGTCCTTCTTTCAAGATGTCACTGTAGATGATTGTGGTGGCGTAAGTACTTGTAAAATGCATGACCTTATGCATGATCTAGCACAGCTAATGGTCGGGAATGAATATGTCGTGGTTGAAGGAGAAGAAGCAAACATTGGAATCAGAACACGTTATTTGTCATCTCGTTGTACTGAACTACAGTTAGCTCCAACATCATTTTCCTACAAGTTAAGGACATTTCTTTTACATCCACAGATCAATGCAAGCAATTATTTGCGTCAGTCATACAATCTTTCCTTGTCAGGCCTAAAATTCTTACGTGTGTTGACACTTTGTGGGTTGAAAATTGTAGCAATCGCTAATAGTTTTGAAGACATGAAGCATTTAAGATATCTCGATCTATCACAGAATACTGCACTGGAACATCTTCCATCGGGCATTACTAGCCTACAGAACTTGCAAACTTTAAAGCTTTCTGGATGTGCTGATCTCAGGATATTACCAGAAAATCTCAATAAAAGTCTGAGGCATATTGAGTTGAATGGTTGCAATAGATTGACATGTATGCCACAGGGGTTAGGAAAGTTGACTAATCTTCAAACACTAACATGTTTTGCACTGAGAAATGGAAGTACAAGCATCAATGACTTGGGTGAGCTAAACAACCTTAGAGGGAGATTAGAAATAAAAGGATTGGTTTTCCTGCGAAATAATGCTGCAGAGGTTCAATCTGCAAAAGTACTTCTTGGGAAGAGACACCTTCAACAATTGGAATTGCGGTGGTTGTATGATGACAATTCCCATCCATGGTTGTCACCACCGTCATTATCCATTGGACAAAAAAGATCCTGGTTGGAAGATGAGATGATTTTACAAGGCCTGCAGCCATACCACTCACTTCAAAAACTAGTTATTGATGGATTTTGCGGCAAAAGTTTACCAGACTGGATAGGGAATCTCTCATCACTATTGACTCTTGAGATCCACAATTGCAATTGCTTGACATCACTACCTGAAGCAATATGTAACCTTGTATCTTTGCAGAAACTTTGCATTTATAACTGCTTACTGTTACAAGAAAGATATGGAAGATCATATGGTAAAGAATGGCGGATAATCTCTTCCATCCGAGAAGTTGAGATACTTCCTATGAAACCATCATTGCTTAAGTATTTTAGTTGA 2535 0.3763 MEALAVTILEKLSSSAYKELGIIWNLKEDIERMRNTVSMIKAVLLDAEAKANNHQVSNWLEELKDVLYDADDVLDDFSIEDLNRKVMARNSIVRQTQIFFSKSNKLAYGHKMKAIQKRLDDIAKIKHALQLNDRPIENPIVYREQRQTYSFVSKDEVLGRDEEKKCIKRYLLDINATDNVSIIPIVGIGGLGKTALAQLVYNDNDVQKHFELKMWVYVSDEFDIKKVAQDIIGDEKNSKMELVQQKLRNKIEGKKFLLVLDDMWNEDRELWLKLKSLFVEGGKGSMIIVTTRSHTVAKITGTHPPLFLKGLDSQKSQELFSRVAFGELKEQNDLELLDIGRDIVKKCAGIPLAIRTIGSLLFSRNLGRRDWLYFKDVEFSKIDQHKDKIFEILKLSYDHLPSFLKKCFAYCSLFPKGFVFEKNTLIQLWVAEGFIQQSNDIRCVEDVGHEYFMSLLSMSFFQDVTVDDCGGVSTCKMHDLMHDLAQLMVGNEYVVVEGEEANIGIRTRYLSSRCTELQLAPTSFSYKLRTFLLHPQINASNYLRQSYNLSLSGLKFLRVLTLCGLKIVAIANSFEDMKHLRYLDLSQNTALEHLPSGITSLQNLQTLKLSGCADLRILPENLNKSLRHIELNGCNRLTCMPQGLGKLTNLQTLTCFALRNGSTSINDLGELNNLRGRLEIKGLVFLRNNAAEVQSAKVLLGKRHLQQLELRWLYDDNSHPWLSPPSLSIGQKRSWLEDEMILQGLQPYHSLQKLVIDGFCGKSLPDWIGNLSSLLTLEIHNCNCLTSLPEAICNLVSLQKLCIYNCLLLQERYGRSYGKEWRIISSIREVEILPMKPSLLKYFS* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4724 844 CDD RX-CC_like 5 124 IPR038005 -
Tpr3g4724 844 PANTHER DISEASE RESISTANCE PROTEIN RP 14 677 IPR044974 GO:0006952
Tpr3g4724 844 PANTHER OS10G0130600 PROTEIN 14 677 - -
Tpr3g4724 844 Pfam NB-ARC domain 177 398 IPR002182 GO:0043531
Tpr3g4724 844 Pfam Leucine rich repeat 557 612 IPR001611 GO:0005515
Tpr3g4724 844 Gene3D - 141 303 IPR027417 -
Tpr3g4724 844 Gene3D - 391 487 IPR036388 -
Tpr3g4724 844 Gene3D Ribonuclease Inhibitor 526 829 IPR032675 -
Tpr3g4724 844 PRINTS Disease resistance protein signature 182 197 - -
Tpr3g4724 844 PRINTS Disease resistance protein signature 250 264 - -
Tpr3g4724 844 PRINTS Disease resistance protein signature 347 361 - -
Tpr3g4724 844 PRINTS Disease resistance protein signature 599 615 - -
Tpr3g4724 844 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 411 IPR027417 -
Tpr3g4724 844 Gene3D - 6 125 - -
Tpr3g4724 844 Pfam Rx N-terminal domain 8 91 IPR041118 -
Tpr3g4724 844 SUPERFAMILY L domain-like 476 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4724 Tpr-Chr3 52161049 52167117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4724 162 844 WRKY Transcription Factor Family AT5G45050 23.161 4.51e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4724 - - mtr:MTR_3g015500 1238.4