Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4710 ATGGCGAGTATTGTGGTAGGAGCACTCCTTTCAGCTTCTGTGAAGCTAGTGTTGCAAAATATAGTTTCAAGTGATTTCGTGAACTTTTCTCGGAGAACGAAACTAGATGTTTCGCTCTTAGAAAAATTGAAAAGAACACTTCTGAGTCTTCAAGCTGTACTTAATGATGCTGAAGAGAAACAAATCACCAATCCTGCTGTCAAGGAATGGCTGGTTATGCTGCAAGATGCTGTCTTTGAAGTTGACAATTTGTTTGACGAAATCAACACCGAGGCATTGAGGCGCAAAGTGGAAGCCAAGCATGAAGGCCAAACTCTCAGTGGTAAGGTGCACAACATCTTTTCTTCTCATGTGAAACTGTTTAAGAGAAACATCAATTCGAAAATGCATAAATTGTTTGAAAGATTAGAATACTTGAGACAACAGAATCTTGGATTAAAAGAAAGTGTCGATGTTTATACTCCTACTTATTCTTTTCTTGGTGAGAAATCTTCTATTTGTGGTAGAGATGATGATATAAAGAAACTCAAAGATCTTTTATTTTCAGAAGGTACTAGTGATATTAGAAGTAAAGTAGGAGTGATTTCCATTGTGGGCATGGGAGGACTGGGTAAAACAACCCTTGCCAAACTCCTTTACAGTGATCCTGAAGTGAAGGAGAAATTTGAGTTGAGAGGGTGGGCATATATCTCAAAAGATTTTGATGTATTCAAGATCACTAAAACCCTTTTTGATTCTGTCACTTCAAAAATAATTAATTATGATGCTTCAAAAAGAAATGTTGCTTGGGACCAGAATAATCTACAATGGCAATTGCAACAATGTTTAAGCAATAAAACTTTTTTGCTTGTATTGGATGACGTATGGTATGGAAGTTACGTTGGTTGGAACAAGCTGAGTGACATCTTTAATGTTGGGGAAATGGGGAGTAAGATCATCATCACAACACGAGATGTAAGAGTTGCACGGCTCATAAAACCCTTGCCTTATCTCTACCATTTGAAACCTCTTGAAACTAAAGATTGCTGGTCTTTAATTGCTAAACATGCAGGTTATGACATGAACCAATGCTACCTGGAAGTAATTGGCCAAATAATTGCCACTAAATGTAGAGGCTTACCATTAGCTGCATTTGCACTTGGGGGTCTTCTTCGAATGAAAGTGTCAGAAGATTATTGGAATGATGTGTTAAAAAGTAATATTTGGGAATTGACTGGTGATGAGGTGCAACCTGCTCTACTATTGAGCTATCGTTATCTTCCTGCTCATTTAAAAGGATGCTTTGCTTATTGTTCAATTTTTCCAAAGAATTCGTTATTAGAGAAAATGATGGTAGTTCAACTGTGGATTGCAGAAGGATTAGTAGTTCCACCAAAAAGTAATTGGGAAAGGTGGGAACATGTAGCAGGAGAGTACTTTGATGAACTTGTGGCAAGGTCACTGATAGAGCGACGGTCAGTGGAGGGAGAAGAATGCTTTGAAATGCACGACCTCATCAATGATTTAGCAACAATGGTTTCATCTCCCAATTGCATGAGGATGGACGAATTGAATCAACACGAAAGTTTTGGAAGGGTACTTCATTTTTCGTACAATAGAGGGCAATATGACTCTTACGATAAATTTGTTAAGTTGTATGAATTAACAGGTCTGCGAACGTTCTTAGCGTTACCATTACAAGATATGTGGTCTGCTTGTTGGTTATCAAACAAGGTATTAGATGACTTGTTGCCAAGAACAAAACAGTTGCGTGTGCTGTCTTTGTCAAACTATTGTACTATCACCAAGTTGCCCAACTCTATTGGAAACTTGATGTGCCTTCGATACTTGAATCTCTCTCGCACTCAGATTGAAAGGTTGCCTTCTGTAACATGCAAACTTTACAATCTACAAACCTTATTGCTGTCAGGCTGCTGGTGTCTCACTGAATTACCAAATGACATGGGGAAATTGGTCAATCTACGCCACCTTGACATCAGAGGAACTCAGTTGAAGGAAATGCCTGCACAAATAGTCAGATTAGAAAATCTCCAAACTTTATCTGACTTTGTTGTTAGCGAACAGTGTGATGGATTGGAGATTGCAGATTTGGGAAAATTTCACCATATTCAGGGAAAGCTTTCTATCTTACAGCTACAAAATGTTAATGATCCCTCAGATGCTTTTAAAGAAAATTTGGAGATGAAAATTCGTATTGATGAATTGGTACTAGAATGGAAATGGCATGACACTACAAATTCAAAAATTCAAAGTGTTGTACTCGAAAAGTTGCGGCCCTCAATATATTTGAAAAAACTCCATATTTTTGGCTATGGTGGAAACAACTTTCCAAACTGGTTGGGAGATTCTTTATTTTCCAACATGGTGTATTTGGAGATCTCAAATTGTCGTAATTGTTCATGGATGCCACCTCTAGGACAATTAGATAATCTGAAAGAAATATTTATTTCTAGGATGGAATCAATAAAGAGAGTTGGTATTGAATTTTATGGAAGTAGTGGTTCTCCTTCGTTTCAACCATTTCCCTCCTTGGAGACACTCTCATTTTTTACTATGCCAGAGTGGGAGGAATGGGAGCCGATTGGTGGCATAAGTACAAAGTTTCCTAGTCTTAAATGTCTGTCACTGGAAACATGTCCTAAACTCAAAGGTAACATACCAAGAAACCTTCCTTCCTTAACTATACTTGAGTTTAAGGGATGTCCTCTGTTGATGGAATCAGGGGATTCACATAATAATACCAACATAATAAGGTCACCGTCTGATGTTGTATTTAGGCAGTTGATGCTACCTCCTTTGAGTTCTCTTCAAAAATTGGAGATAGACAGCTTTCCCTCTTTGACATGTTTCCCCAGAGAAGATTTACCCAAAACCTTGAAATCTCTCAAAATCAGTAATTGTGAGAATCTAGCATTCCTTCCTCGTGAATCCTTGTGCAATTACACATCACTTGAGGATTTGGAAATATTTCGTAGTTGTAGCTCAATGACAGCGTTCACCTTCGGTTCTCTCCCAGTCCTCAAAACTATGTGTATTGCAGCTTGTAAAAATCTGAAATCGATATTAATTGCAGAAGATGTGCCACAACAGAATCTCTCATTTCTTAGAAGCATCACAATACGGTTTTGTGATGAACTGGAGTCATTTTCCCTGAGTGGTTTACCCACTCGCAACCTCATTTATATGGAGGTGCAAAAGTGTAAAAAACTTTGTTCACTACCAGAACCTATAAACACTCTAGCTAGCCTTCAAGAAATGGAAATTCAAAATCTTCCAAATCTGCAATCTATTGCCAAAGATGGTTTGCCTACCAGTTTACAACAACTGATTATTGGCTCAATTGGAGGGATTTTGGGGAATACATTATGGGAAAGTCTCAAATGTCTTTCAGTGTTGCGAATTAATAGTGGTGATATAGTGAAGGCTCTAATGAAAATGGAAGTGCCACTCCTACCTTCTTCTCTCGTTTCCTTATACATCTATGGTGTTGAAGATATAGAATGCTTGGATGGGAAGTGGCTTCAACATCTCTCCTCTCTCCGTAACCTTGACATTGAATGGGCTCCAAAGCTCAATTCATTGCCAGAACAGGGATTTCCTTCCTCTCTTTCCGGACTGCATATCAAAAACTGTCCGTTGCTGGAACCAAGTTTGCAGAGGAAGCAAGGGAAAGAGTGGCGTAAGATTGCTCACATCCCCTCCATAGTTATCGACAACAAAATGATCACCTGA 3732 0.385 MASIVVGALLSASVKLVLQNIVSSDFVNFSRRTKLDVSLLEKLKRTLLSLQAVLNDAEEKQITNPAVKEWLVMLQDAVFEVDNLFDEINTEALRRKVEAKHEGQTLSGKVHNIFSSHVKLFKRNINSKMHKLFERLEYLRQQNLGLKESVDVYTPTYSFLGEKSSICGRDDDIKKLKDLLFSEGTSDIRSKVGVISIVGMGGLGKTTLAKLLYSDPEVKEKFELRGWAYISKDFDVFKITKTLFDSVTSKIINYDASKRNVAWDQNNLQWQLQQCLSNKTFLLVLDDVWYGSYVGWNKLSDIFNVGEMGSKIIITTRDVRVARLIKPLPYLYHLKPLETKDCWSLIAKHAGYDMNQCYLEVIGQIIATKCRGLPLAAFALGGLLRMKVSEDYWNDVLKSNIWELTGDEVQPALLLSYRYLPAHLKGCFAYCSIFPKNSLLEKMMVVQLWIAEGLVVPPKSNWERWEHVAGEYFDELVARSLIERRSVEGEECFEMHDLINDLATMVSSPNCMRMDELNQHESFGRVLHFSYNRGQYDSYDKFVKLYELTGLRTFLALPLQDMWSACWLSNKVLDDLLPRTKQLRVLSLSNYCTITKLPNSIGNLMCLRYLNLSRTQIERLPSVTCKLYNLQTLLLSGCWCLTELPNDMGKLVNLRHLDIRGTQLKEMPAQIVRLENLQTLSDFVVSEQCDGLEIADLGKFHHIQGKLSILQLQNVNDPSDAFKENLEMKIRIDELVLEWKWHDTTNSKIQSVVLEKLRPSIYLKKLHIFGYGGNNFPNWLGDSLFSNMVYLEISNCRNCSWMPPLGQLDNLKEIFISRMESIKRVGIEFYGSSGSPSFQPFPSLETLSFFTMPEWEEWEPIGGISTKFPSLKCLSLETCPKLKGNIPRNLPSLTILEFKGCPLLMESGDSHNNTNIIRSPSDVVFRQLMLPPLSSLQKLEIDSFPSLTCFPREDLPKTLKSLKISNCENLAFLPRESLCNYTSLEDLEIFRSCSSMTAFTFGSLPVLKTMCIAACKNLKSILIAEDVPQQNLSFLRSITIRFCDELESFSLSGLPTRNLIYMEVQKCKKLCSLPEPINTLASLQEMEIQNLPNLQSIAKDGLPTSLQQLIIGSIGGILGNTLWESLKCLSVLRINSGDIVKALMKMEVPLLPSSLVSLYIYGVEDIECLDGKWLQHLSSLRNLDIEWAPKLNSLPEQGFPSSLSGLHIKNCPLLEPSLQRKQGKEWRKIAHIPSIVIDNKMIT* 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4710 1243 Pfam NB-ARC domain 171 398 IPR002182 GO:0043531
Tpr3g4710 1243 Gene3D - 337 415 IPR042197 -
Tpr3g4710 1243 PRINTS Disease resistance protein signature 194 209 - -
Tpr3g4710 1243 PRINTS Disease resistance protein signature 275 289 - -
Tpr3g4710 1243 PRINTS Disease resistance protein signature 370 384 - -
Tpr3g4710 1243 PRINTS Disease resistance protein signature 888 904 - -
Tpr3g4710 1243 Pfam Rx N-terminal domain 17 102 IPR041118 -
Tpr3g4710 1243 Gene3D - 27 133 - -
Tpr3g4710 1243 Gene3D Ribonuclease Inhibitor 912 1101 IPR032675 -
Tpr3g4710 1243 SUPERFAMILY L domain-like 491 904 - -
Tpr3g4710 1243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 431 IPR027417 -
Tpr3g4710 1243 Coils Coil 40 60 - -
Tpr3g4710 1243 Gene3D - 156 327 IPR027417 -
Tpr3g4710 1243 Gene3D - 416 505 IPR036388 -
Tpr3g4710 1243 PANTHER DISEASE RESISTANCE PROTEIN RP 29 973 IPR044974 GO:0006952
Tpr3g4710 1243 Gene3D Ribonuclease Inhibitor 1102 1234 IPR032675 -
Tpr3g4710 1243 PANTHER OS05G0414200 PROTEIN 29 973 - -
Tpr3g4710 1243 SUPERFAMILY L domain-like 932 1226 - -
Tpr3g4710 1243 Gene3D Ribonuclease Inhibitor 562 911 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4710 Tpr-Chr3 52043355 52048105 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4710 594 680 WRKY Transcription Factor Family AT4G12020 38.636 3.58e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4710 - - mtr:MTR_3g014320 1182.55