Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4689 ATGGCAAAGTTGGTTGCTGAGGCATTTCTTTCTTCTTTCGGTCAATATATTTTTGAAAGGTTGGCTTCAAGTAATTTGACAGACTACTTTCGTAGAGGCAAACTTGACAAGTTGGTGGGTGAACTTGAGTCTACACTCGATTCTATCACCCAAGTGTTAGATGATGCAGAGATAAAGCAATACCAAATCCCAGACGTCAAGAAGTGGCTTGGTAATGTTAAACATGCTATGTATGAGGCTGATCAACTACTGGATGAGATTGCTACTGATGCGCCACTGAAGAAGTTGAAGGCCGAATCTCAGCCTTCTACTAGCCATAATATTGTCAACTTCATTCCAACTTTGACTAATCCATTTGAATCCAGGATCAAAGAATTGATAAAGAGCCTACATTCTCTTGTAGAGCAGATGGATACACTGCAATTGAAAAATCAAACATATGCCAGTAATGCAGTTGGATTCAATTCGAAACCTCCAGGAATAGAAGAAACTACATGTTTGGTGGATGCATCTGACATATATGGTAGAGACGTTGATAAAGAAGAAATGATCAAAATTTTACTTTCTTCAGAAAATGATAGCAGCAACAAGACACCTATAATCAGCATAGTTGGTTTGGGTGGGATGGGCAAGACCACTTTTGCTAAGCTTGTGTACAATGACAACAAGATAGTGGAGCATTTTGAACTTAAAGCTTGGGTCTATGTTTCAGAATCTTTTGATGTTGTTGGACTCACCAAAGAAATTCTCAAGACATTTAATTCTCCGGCAGAGGGTGAATCAAATTTAAATCTACTCCAACTACGGCTGCAACAAACACTAACCGGCAAAAAGTATCTGCTTGTTTTGGATGATATTTGGAATGGAAATGAGAAGAGTTGGAAGCAGTTACTACTTCCTTTTGACCATGGATCTTCTGGAAGTAAGATTATTGTGACAACACGTGACAAGGAGATAACATATGTCCTGAAATCCACCAAGTTATTTAATTTACAACAATTGAACAATAGCGATTGTTGGAGTTTATTTGTGACACATGCGTTTGGTGGCAAGAATTTGGACGAATATCCACATCTTGAACAAATTGGCCTGGAAATAGTCCACAAGTTTGGAGGGTTGCCTTTAGCAGTAAAAACACTGGGCCAACTCTTGCAAAGAAAATCTGACAATGAATGGAGGAAGATATTAGAGACTGATATGTGGCGATTATCAGATAAGGATAACGACATTAACCCAACGCTGAGATTGAGTTACCATAATCTCCCATCTAATCGGAAGCGTTGTTTTGCTTATTGTTCTTTATTTCCCAAAGGTTATGGCTTTGGCAAAGGTGAATTAATCAAGTTTTGGATGGCAGATGGTTTGTTGAAGTGTTCCGGAGCAGGCAAAAGTGAAGAAGAGTTGGGTAATGAAATTTTCACCGATCTGGAGTCAATTTCATTTTTCCAGAAATCATTGTATGATGCATTTGTCATGCATGATCTTGTCAATGATTTAGCAAAATCAGTGTCAGGAGAATTTTGCATGCATATAGGGGGTTCTAGGGTGGAAGGTATCCCTGAAAGAACACGCCACATTCAGCTGTCTCTTCGATATTTAAATTGTGGTGATAAATTACTAGAGCCAATTTGTAAATGCAAGGGACTACGTAGTTTGATAGTAGAGCGCAACACAACTACGTTGATAAGCAACGATGTGCAACGTGATCTGTTTTCAAGACTAACATGGTTGCGGATGTTATCATTTAGATATTGTGGTCTGTCAGAGCTAGTTGATGAGATAGGCAATTTAAAACTTTTGCGTTATCTAGACCTTTCTCACACACAGATTAAAAGCTTACCTGATACCATTTGTATGTTGTATAATTTGCAAACACTCTTGTTGCGAGGGTGTAAATTGACAGAGCTCCCTTCAAATTTTGCCAAACTCATCAATTTACGTCATCTTGAGCTCCCGTCTGATCGCATGGATTTCCCTGTTTTAAAAAAGATGCCAAAGAATATAGGAATGTTGAACAAACTTCAGTACTTGCCTTACTTTATTGTGGAAGAGCAGCATGGGTCTAATATTAAGGAGTTGGAGAAACTAAACCATCTTCATGGAACAATTAAAATTACAGGCTTGGGTGTCATTGATCATGTAGATGTTGCAAAAGCCAATTTGAAAGATAAGAAGTATTTAGAAGAATTATATATGGATTTCTATAAGAATGGAAAAGAAGAAATGAATGAGTGGATTGTTGAAAGAAATGTATCTGTGTTGGAGGCTCTTCATCCAAATAGCAACTTGAAGAGGCTGACCATTGTAAACTACAGTGGTAATTCTTTTCCAAATTGGCTAAGGGGTTCTGATTTACCCAACTTAGTATCTCTTAAACTGAAGAATTGTCCCAAGTTGGAGGAATGTTTATGTCTTGAAGGATCTCCTTTGCTTAAAGAGCTTTATATAAGTAAATGTTCCAAATTGAAAAGGGTCCCACTGCCTCAACACCTTCCTTCTTTACAAAAATTGTACATTTGTGATTGTGAAATGTTGGAAGCATCAATTCTCAAGGGTGATAGTATGATAGAGTTAGTTCTAGAGAGATGTTATTGGATTTTGGTAAATGAATTGCCGACTAGCTTGAAAAAGTTTGTCCTTTTGGGAAATCGGTATGTCGAGTTCTCCGATGAGCAAAATTTAGTTAACTGTACCATTCTTGACGAGTTGGAGTTTGATTTCAGAGGCTCTGTTGTAAAACGTCCCTCTTTAGATCTGCGTTGCTATAATTCTCTTTGTTATCTTACAATAAAAGGATGGGACTCTTCCTCCTCCTTGCCTCTTTCACTACATCTCTTCACCAATCTTGAACATCTCTGTTTGTACGATTGCCCACAGTTGGAATCATTTTCAAGGGGAGGTTTGCCTTCCAACTTGAGTTCACTAGAAATATCCAATTGCCCAAAACTGATTGGTTCGAGAGAGGAGTGGGGTTTGTTCCAACTCAATTCTTTGATTAATTTCACAGTTAGAAATCATGAGTTTGAAAACGTGGAGTCATTCCCAGAGGAGAATCTGCTGCCACCAACTCTTGTATCTCTTTGGTTGACTAATTGTTCAAAGCTAAGAATAATGAACAACAAGGGTTTTCTCCACCTCAATTCTCTAACATATCTACGGATTTACAAGTGCCCTAGTCTTGAGAGCTTGCCAGAGGAGGGTCTACAACAACTCAGCTCCCTTTCAATGTTGTGGATTAAGAAATGTCCATTAATTAGGGAGAAGTACAAAAAGGAGGGAGGAGAGCGTTGGCATTCGATTAGTCACATCCCTGAAGTGAAGATTGACTACATTGAGCAGCACAAATGA 3348 0.3835 MAKLVAEAFLSSFGQYIFERLASSNLTDYFRRGKLDKLVGELESTLDSITQVLDDAEIKQYQIPDVKKWLGNVKHAMYEADQLLDEIATDAPLKKLKAESQPSTSHNIVNFIPTLTNPFESRIKELIKSLHSLVEQMDTLQLKNQTYASNAVGFNSKPPGIEETTCLVDASDIYGRDVDKEEMIKILLSSENDSSNKTPIISIVGLGGMGKTTFAKLVYNDNKIVEHFELKAWVYVSESFDVVGLTKEILKTFNSPAEGESNLNLLQLRLQQTLTGKKYLLVLDDIWNGNEKSWKQLLLPFDHGSSGSKIIVTTRDKEITYVLKSTKLFNLQQLNNSDCWSLFVTHAFGGKNLDEYPHLEQIGLEIVHKFGGLPLAVKTLGQLLQRKSDNEWRKILETDMWRLSDKDNDINPTLRLSYHNLPSNRKRCFAYCSLFPKGYGFGKGELIKFWMADGLLKCSGAGKSEEELGNEIFTDLESISFFQKSLYDAFVMHDLVNDLAKSVSGEFCMHIGGSRVEGIPERTRHIQLSLRYLNCGDKLLEPICKCKGLRSLIVERNTTTLISNDVQRDLFSRLTWLRMLSFRYCGLSELVDEIGNLKLLRYLDLSHTQIKSLPDTICMLYNLQTLLLRGCKLTELPSNFAKLINLRHLELPSDRMDFPVLKKMPKNIGMLNKLQYLPYFIVEEQHGSNIKELEKLNHLHGTIKITGLGVIDHVDVAKANLKDKKYLEELYMDFYKNGKEEMNEWIVERNVSVLEALHPNSNLKRLTIVNYSGNSFPNWLRGSDLPNLVSLKLKNCPKLEECLCLEGSPLLKELYISKCSKLKRVPLPQHLPSLQKLYICDCEMLEASILKGDSMIELVLERCYWILVNELPTSLKKFVLLGNRYVEFSDEQNLVNCTILDELEFDFRGSVVKRPSLDLRCYNSLCYLTIKGWDSSSSLPLSLHLFTNLEHLCLYDCPQLESFSRGGLPSNLSSLEISNCPKLIGSREEWGLFQLNSLINFTVRNHEFENVESFPEENLLPPTLVSLWLTNCSKLRIMNNKGFLHLNSLTYLRIYKCPSLESLPEEGLQQLSSLSMLWIKKCPLIREKYKKEGGERWHSISHIPEVKIDYIEQHK* 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4689 1115 Gene3D Ribonuclease Inhibitor 864 1093 IPR032675 -
Tpr3g4689 1115 Gene3D - 333 417 IPR042197 -
Tpr3g4689 1115 SUPERFAMILY L domain-like 756 1086 - -
Tpr3g4689 1115 Gene3D - 15 138 - -
Tpr3g4689 1115 Gene3D - 418 500 IPR036388 -
Tpr3g4689 1115 SMART LRR_typ_2 620 642 IPR003591 -
Tpr3g4689 1115 SMART LRR_typ_2 597 618 IPR003591 -
Tpr3g4689 1115 Coils Coil 123 143 - -
Tpr3g4689 1115 ProSiteProfiles Leucine-rich repeat profile. 599 620 IPR001611 GO:0005515
Tpr3g4689 1115 Coils Coil 39 59 - -
Tpr3g4689 1115 PRINTS Disease resistance protein signature 200 215 - -
Tpr3g4689 1115 PRINTS Disease resistance protein signature 273 287 - -
Tpr3g4689 1115 PRINTS Disease resistance protein signature 370 384 - -
Tpr3g4689 1115 PRINTS Disease resistance protein signature 783 799 - -
Tpr3g4689 1115 PANTHER DISEASE RESISTANCE PROTEIN RP 30 1065 IPR044974 GO:0006952
Tpr3g4689 1115 SUPERFAMILY L domain-like 491 845 - -
Tpr3g4689 1115 Pfam NB-ARC domain 180 398 IPR002182 GO:0043531
Tpr3g4689 1115 Gene3D Ribonuclease Inhibitor 501 863 IPR032675 -
Tpr3g4689 1115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 432 IPR027417 -
Tpr3g4689 1115 Pfam Rx N-terminal domain 10 98 IPR041118 -
Tpr3g4689 1115 PANTHER OS05G0414200 PROTEIN 30 1065 - -
Tpr3g4689 1115 Gene3D - 163 328 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4689 Tpr-Chr3 51848577 51901034 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4689 173 387 WRKY Transcription Factor Family AT5G45050 26.786 2.45e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4689 - - mtr:MTR_3g023030 1245.34