Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4682 ATGCAAACATACAAGGTTCTCATGCTAATGCTTCATACTTTCTTCTTCTGTATCATTCCAACTTCATCTATACAATATGAAACTTTTTCTGCCATTACACCAGATCATTCTATCCAAGGTAATGAAACTTTAGTGTCTTCATCTGGAACTTTTGAAGCTGGATTCTTCAACTTTGCAAATTCACAACTCCAATACTTTGGTATATGGTACAAAACAATATCACCTAAAGTGTATGTTTGGATTGCCAATAGAGATTCTCCGATACAAAACTCAACGCCAATTCTAAAACTAACATATAAAGGTACTCTTACTATTGTTGATGATTCTAGAACCATTATATGGTCCTCCAATGCATCAACAGTTGCGGCAAAACCGGTCTTGTTGCTTCTAGATTCAGGAAACCTTGTTGTGAAAGATGGAGAGAGAATTCTGTGGGAAAGTTTTGATTACCCTGGTGACACTTTCCTTGCAGGAATGAAACTCAAGACAAGTTTACTAAATGGTCCTTATATGTCTCTTACATCATGGAAAAGTGTTGACGATCCTTCTTTAGGTGAGTTTTCTTATCACATAGATTTTCATGGATTTCCTCAATTAGTTACAACAAAGGGAGGAAATATATATCATAGGGGACCAGCTTTGAATGGTAATGCTTTTGGTGGAGTTTCATGGCTAAGTAATCTTAAGTTGTTGAAATTTTCATTAATGTTAAATGATAAAGAAGTTTCTTATGAATATGAAACTTTGAAAAATGAAACTATTACTAGATTATGGCTTAGTCCATCAGGTTATTCAGAGAGATTGGTATGGTCAGAGAGTAGAAAAAATTGGGATATTATAACGACTCGTCCGTTGGATCAGTGTGCATATTATTCAAGTTGCGGTGATAATTCTGTCTGCAATATTACAAACTCTCCAAGAATATGTCAATGCTTGGAAGGTTTTGTACCTAAGTATTATGAAAAGTGGAATTCTTTGGATTGGTCTGGTGGATGTGTTAGAAGAATAAGGTTAAAATGTAGTGGAGATTGGTTTCTGCAGCATTCAGGAGTTGAGTTGCCAGATACATCCTCTTCATGGTTTAACAAGAGTTTGCGTCTTGAAGAATGTGAACAAATGTGTTTGAAAAATTGTTCATGTTCAGCATATACAAACTTAAATGTTAAAAGTAATAGTGGATGTTTGATTTGGTTTGGAAATATAAAGGACTTGAAAAACAATATAGACCAAGGACAAGATATTTTCATAAGACTTGCAGCCTCAGAGTTAGATCATGGAAGAAATAGGAGGAGCTTTAACAAAATGAAGCTTGCAGGGGCACTAGTAGGAGTCATTTTATTCATCATGATTCTTGGACTAGCCACACTTACATATATAAATAGAAAGAAGCTTGCAAAACCAGGGATGCTAAAAACATTATATATGAAGCACAAAAGAGATGAAGAAGATGTGCAGCTATCAACAATATTTGGTTTTTCAACCATATCTAATGCCACAAATCACTTTTCAGACCACAACAAGTTAGGACAAGGTGGTTTTGGACCAGTATACAAGGGCATATTGGAAGATGGACTAGAGATTGCAGTAAAGAGGCTATCAGAAATATCAGCACAAGGAGAAGAACAGTTCAAAAATGAAGTCATGCTTATGGCGAAGCTTCAGCATCGCAATCTTGTAAAACTTCTTGGTTGTTCAATATTCCAAGACGAAAAGCTCCTGATCTATGAATTGATGCCCAACAGAAGCTTGAATTATTTCATTTTTGATTCAACGCGAAAGAAACAGCTAGATCTGATCAAACGATTTCAAATTATTGATGGGATCGCTCGAGGTCTGCTCTATCTTCATCAAGACTCTAGATTAAGAATCATCCATAGAGACCTCAAAACAAGTAATATTCTTCTTGATAATGATATGAATCCAAGGATATCAGATTTTGGTCTAGCTAGAACATTTCTTGGAGATCAAGATGAGTCTAACACAAAAAGATTGATGGGAACATATGGTTATATGCCACCTGAATATGCGGTCCGTGGATGTTTTTCAATCAAATCTGATGTTTTTAGCTTTGGAGTAATTGTTCTTGAGATAATTAGTGGGAGAAGGATTCGAAATTTTTATGACCCGTGTCATCATCACCTAAATCTTCTTGGTCATGCATGGAGACTGTGGGGTGAAGAAAAGGCACAAGAGTTAATAGATGAGTCATTCCATGGTACAGTAATTCCATGTGAAATTTTGAGATGTATTCATATTGGTCTACTATGTGTGCAACAAAGACCAGAACATAGATCAAACATGTCATCTGTGGTCTTAATGTTGAATGGTGAAAAACTGTTGCCTGAGCCTAACCAACCTGGGTTCTATACTGCAACAGCTCATCATCCGATTCAGGTAGATTCTTCACAAAATGAAGCTTCTCTGTCATTGTTAGAGGCACGGTAG 2445 0.3603 MQTYKVLMLMLHTFFFCIIPTSSIQYETFSAITPDHSIQGNETLVSSSGTFEAGFFNFANSQLQYFGIWYKTISPKVYVWIANRDSPIQNSTPILKLTYKGTLTIVDDSRTIIWSSNASTVAAKPVLLLLDSGNLVVKDGERILWESFDYPGDTFLAGMKLKTSLLNGPYMSLTSWKSVDDPSLGEFSYHIDFHGFPQLVTTKGGNIYHRGPALNGNAFGGVSWLSNLKLLKFSLMLNDKEVSYEYETLKNETITRLWLSPSGYSERLVWSESRKNWDIITTRPLDQCAYYSSCGDNSVCNITNSPRICQCLEGFVPKYYEKWNSLDWSGGCVRRIRLKCSGDWFLQHSGVELPDTSSSWFNKSLRLEECEQMCLKNCSCSAYTNLNVKSNSGCLIWFGNIKDLKNNIDQGQDIFIRLAASELDHGRNRRSFNKMKLAGALVGVILFIMILGLATLTYINRKKLAKPGMLKTLYMKHKRDEEDVQLSTIFGFSTISNATNHFSDHNKLGQGGFGPVYKGILEDGLEIAVKRLSEISAQGEEQFKNEVMLMAKLQHRNLVKLLGCSIFQDEKLLIYELMPNRSLNYFIFDSTRKKQLDLIKRFQIIDGIARGLLYLHQDSRLRIIHRDLKTSNILLDNDMNPRISDFGLARTFLGDQDESNTKRLMGTYGYMPPEYAVRGCFSIKSDVFSFGVIVLEIISGRRIRNFYDPCHHHLNLLGHAWRLWGEEKAQELIDESFHGTVIPCEILRCIHIGLLCVQQRPEHRSNMSSVVLMLNGEKLLPEPNQPGFYTATAHHPIQVDSSQNEASLSLLEAR* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4682 814 Gene3D Phosphorylase Kinase; domain 1 469 577 - -
Tpr3g4682 814 PIRSF SRK 1 813 IPR024171 GO:0004674
Tpr3g4682 814 SMART blect_4 35 151 IPR001480 -
Tpr3g4682 814 ProSiteProfiles Protein kinase domain profile. 502 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4682 814 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 21 814 - -
Tpr3g4682 814 SUPERFAMILY Protein kinase-like (PK-like) 484 774 IPR011009 -
Tpr3g4682 814 CDD B_lectin 35 151 IPR001480 -
Tpr3g4682 814 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Tpr3g4682 814 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Tpr3g4682 814 Pfam Protein tyrosine and serine/threonine kinase 505 702 IPR001245 GO:0004672|GO:0006468
Tpr3g4682 814 SMART ntp_6 340 418 IPR003609 -
Tpr3g4682 814 Pfam PAN-like domain 340 403 IPR003609 -
Tpr3g4682 814 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 814 - -
Tpr3g4682 814 SMART serkin_6 502 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4682 814 Pfam D-mannose binding lectin 78 177 IPR001480 -
Tpr3g4682 814 Gene3D Transferase(Phosphotransferase) domain 1 578 781 - -
Tpr3g4682 814 CDD PAN_AP_plant 338 419 - -
Tpr3g4682 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 182 IPR036426 -
Tpr3g4682 814 Gene3D - 24 148 IPR036426 -
Tpr3g4682 814 CDD STKc_IRAK 508 776 - -
Tpr3g4682 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Tpr3g4682 814 ProSiteProfiles PAN/Apple domain profile. 340 419 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4682 Tpr-Chr3 51801398 51805426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4682 430 788 Receptor kinase-like Gene Family AT4G23230 51.247 2.92e-118 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g4682 PK_Tyr_Ser-Thr 6.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4682 - - gmx:100803275 1139.79