Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4680 ATGGAGAACCATAATAAGGTGCTAATGCTAATTGTGTGTATTTTCTTCTTTTGCTCCATGCCTACTTACAGTATTCAGCACACTCTCGCTACAAATCAGTTTATACAATACAATGATACCCTTGTTTCTGCAGATGGAACTTTCAAAGCAGGATTTTTCAACTTCGGAGATCCACAGCGACAATACTTTGGTATATGGTACAACAACATATCTCCACGGACTTATGTGTGGGTAGCCAATAGAAACACGCCAGCACAAAATTCAACTGCAATGATGAAACTTACCGATCAAGGAAGTCTTGTTATTCTTGATGGCTCCAAAGGAGTTATCTGGAACTCCAATTCATCAAGAATTGGAGTGAAACCAGTTGTTAAGCTTTTGGATTCTGGAAATCTTGTTCTAAAAGATGCAAACAGCACTCAAAACTTTTTTTGGGAAAGTTTTGATTATCCCGGTGACACTTTCCTTGCTGGAATGCAACTGAAAAGTAATTTAGTTACTGGTCCATATAGATATCTCACATCTTGGAGAAACCCTGAAGATCCTGCTGAAGGTGAGTATTCGTATAGGATAGATACACATGGTTTTCCTCAACTGGTTACTGCAAAGGGAGCAACAATTCTGTATAGAGGAGGATCATGGAATGGAATTCTTTTCAGTGGTTCTTCTTGGCTAAGAAAGCAGAGAATCTTGAATTTCTCTTTAGTGATCACTGACAAAGAACTCTCTTATCAATACAAAAGTCTGAACATTTCAATTATTACTAGAAAAGTGCTAGATCCATACGGAACTTCACAACGTTTTATATGGTCAGATAGGACACAAATTTGGGAGCCTACTTCTTCTCGTCCTGCAGACCAGTGTGATGATTATGCCTTGTGTGGTATTAACTCTAACTGCAATATCAATGGATTTCCAATATGTGAATGCTTGGTTGGTTTCATGCCAAAATTTCAACCAAAGTGGGAGTCATCAAATTGGTCTGATGGGTGTGTAAGGAAAACACATTTAAATTGTCTCCATGGAGATGGATTTTTACCATACAGAAACATGAAATTGCCAGATACATCAGCATCGTGGTTTGACAAGAGCATGACCCTTGAGGAATGTAAGACAATGTGTTTGAAAAAATGTTCTTGCACTGCATATGCAAATTTAGATGTCAGAGCTGGTAGGAGTGGCTGCTTACTTTGGTTTGACAACATTGTGGACATGAGAATACATCAAGACCAAGGACAAGACATTTACATACGGCTGGCATCTTCAGAATTTGATCATAAAAAGAATATGAGAAACTTTAAGCGTGCTGGGATTCTTGCTGGAGTTATTGCATTGGTTATAGGAATAGCCGTTCTTGTATTGGTAACATCAGTATACAGAAAGAAGCTTGGGTATATAAAAAAGATATTTAAATGGAAGTACAAGAAGCAAAATGAAGATGGTGACTTAGTAACGATATTTAATTTTTTGTCCATCACAAATGCAACAAATAACTTCTCTAACAGAAACAAGTTAGGAGAAGGTGGTTTTGGACCAGTGTACAAGGGCGTAATGGTAGATGGCAAAGAGATTGCTGTTAAGAGGCTTTCTAAAACATCAATACAAGGAATTGAGGAATTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGTAATCTTGCAAAACTTATTGGTTGTTCTATTAAACAAGATGAAAAGTTGTTAATCTACGAATTCTTGCCCAACCGGAGCTTGGATTACTTTATATTTGATACTACACGAAGCAAATTACTAGATTGGACTAAGCGCTTGGAAATTATCGATGGGATTGCTCGAGGGCTGCTCTATCTCCATCAAGATTCTACACTAAGAATCATACACAGAGATGTCAAAATAAGCAATATTCTTCTTGATATTGACATGGTCCCGAAGATATCAGATTTTGGTTTAGCCAGATCATTTATGGGAGACCAAGCTGAGGCAAATACAAACACAGTGACAGGAACACATGGATACATGCCTCCAGAATATGCAGTGCATGGATCTTTCTCAATAAAATCGGATGTTTTTAGCTTCGGAGTCGTTGTTCTTGAGATAATTAGCGGTAAAAAGAATAGCGGATTTTGTGACCCTCGACACCGTCTAGACCTTCTTGGGCATGCATGGAGACTATGGATTGAAGAAAAGCCAGAGGAGTTAATAGCTGACATATTATATGATGAGGCCATATATTCAGAAATAATAAGATTTATTCATGTGGGTCTATTGTGTGTACAACAGCAACCGGAAAATAGGCCTAACATGTCATCTGTGGTCTTTATGTTAAAGGGTGAAAAGTTACTCCCTGAACCAAGTGAACCCGGGTTCTACTCAGGAAGACATAATAAGAATGGTACAGATTTTTCAATAAATGAAGCTACAATCTCATTGTTAGAGGCCCGAAAAGGACAAACAAACACAAACACAATGGAGAACCATAATAAGGTGCTAGTGCTAATTGTGTGTACTTTCTTCTTTTGCTCCATGCCTACTTATTGTATTCAGCACACTCTTACTACAAATCAGTTTATACAATACAATGATACCCTTGTTTCTGCAGCTGGAACCTTTGAAGCAGGATTTTTCAATTTTGGAGATCCACAACGCCAATACTTTGGTATATGGTACAAGAGCATATCACCAAGGACTATTGTGTGGGTTGCTAATAGAGACACACCAGTACAAAACTCAACAGCAATGATGAAACTTACTGATCAAGGAAGTCTTGTTATTATTGATGGCTCCAAAGGCATTATCTGGAATTCCAATTCATCAAGAGTTGGAGTGAAACCAGTTGTTCAACTTTTGAATTCAGGAAATCTTGTTCTGAAAGTTGCAAACAACACTGAGAACTTTTTGTGGGAAAGTTTTGATTATCCCGGTAACACTTTCCTTGCTGGAATGCAGCTGAAAACTAATTTAGTTACTGGTCCATATAGGTATCTCACATCTTGGAGAAGCCCCGAAGATCCTGCTGCAGGCGAGTTTTCATATAGGATAGATACACATGGTTATCCTCAACAGGTTACTGCAAAGGGAGCAACAATTCTGTATAGAGGAGGATCATGGAATGGAATTCTTTTTACTGGTGTTTCTTGGTTAAGAAAGCATAGAATCTTGAATTTCTCAGTAGTGTTCACAGATAAAGAATTCTCTTATCAATATGAAAGTCTGAACAATTCAATTATTACTAGAATGGTGCTAGATCCATATGGAACTTCACAACGTTTTATATGGTCAGATAGGACACAAATTTGGGAGTCTATATCTTCTCGTCCTACAGATCAGTGCGATGTTTATGCCTTGTGTGGTATCAACTCTAACTGCAATATTAATGGCTTTCCAATATGTGAATGCTTGGAAGGTTTCATGCCAAAATTTCAACCAAAGTGGGAGTCATCAAATTGGTCTGATGGGTGTGTAAGGAAAACAGATTTAAATTGTCTCCATGGAGATGGATTTTTACCATACACAAACATGAAGTTGCCAGATACATCAACATCATGGTTTGACAAGAGCATGACACTTGAGGAATGTAAGACAACGTGTTTGAAAAACTGTTCTTGCACAGCATATGCAAGTTTAGATATCAGTGATGGTGGGAGTGGTTGCTTACTTTGGTTTAACAACATTGTGGACATGAGAATACATCCAGATCAAGGACAAGAAATTTACATACGGTTGGCATCTTCAGAACTTGATCATAGAAAGAATAAGAGGAACTTCAAGCGTGCTGGGATTCTTGCAGGAGTTATTGCATTGATCATAGGACTAACTGTTCTTGTATTGGTCACATCAATATACAGAAAGAAGCTTGGTAAGCCAAGGTATATAAAAAAGTTATTTAACTGGACGTATAAGGAGAAGGGAGATGGTGACTTGGTAACGATATTTGATTTTTCGGCCATCACAAAGGCAACAAATAACTTCTCTAACAAAAACAAGTTAGGCGAAGGTGGTTTTGGACCGGTGTACAAGGGCATAATGGTAGATGGCCAAGAGATTGCTGTTAAGAGGCTGTCTAAAACATCAGGACAAGGAGTTGAAGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGCAATCTTGCAAAACTTATTGGTTGTTCTATTCAACAAGATGAAAAGTTGTTGATCTACGAATTCTTGCCCAACAGAAGCTTGGATTACTTTATTTTTGATACTACACGAAGCAAACTACTAGATTGGACTAAGCGCTTGGAAATTATCGATGGGATTGCTCGGGGGCTGCTCTATCTCCATCAAGATTCTACACTAAGAATCATACATAGAGATGTCAAAATAAGCAATATTCTTCTTGATATTAATATGATCCCGAAGATATCAGATTTTGGTTTAGCCAGATCATTTATGGGAGACCAAGCTGAGGCAAATACAAATACAGTGACGGGAACACATGGATATATGCCTCCAGAATATGCCGTGCATGGATCTTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTCGTTGTTCTTGAGATAATTAGCGGCAAAAAGAATAGCGGATTTTGTGACCCTCGACATCGCCTAGACCTTCTTGGGCATGCATGGAGACTCTGGATTGAAGATAGGCCAGAGGAGTTAATAGCCAACATATTCTATGATGAGGCCATATATTCAGAAATAATAAGATTTATTCATGTGGGTCTATTGTGTGTACAACAGCAACCAGAAAATAGGCCTAACATGTCATCTGTGGTCTTTATGTTAAAGGGTGAAAAGTTACTCCCCGAACCAAGTGAACCCGGGTTCTACGCAGGAAGAAATCATAAGAATAGCACAGAATTTTCAATAAATGAAGCTACAATGTCATTGTTAGAGGCCCGATAG 4887 0.381 MENHNKVLMLIVCIFFFCSMPTYSIQHTLATNQFIQYNDTLVSADGTFKAGFFNFGDPQRQYFGIWYNNISPRTYVWVANRNTPAQNSTAMMKLTDQGSLVILDGSKGVIWNSNSSRIGVKPVVKLLDSGNLVLKDANSTQNFFWESFDYPGDTFLAGMQLKSNLVTGPYRYLTSWRNPEDPAEGEYSYRIDTHGFPQLVTAKGATILYRGGSWNGILFSGSSWLRKQRILNFSLVITDKELSYQYKSLNISIITRKVLDPYGTSQRFIWSDRTQIWEPTSSRPADQCDDYALCGINSNCNINGFPICECLVGFMPKFQPKWESSNWSDGCVRKTHLNCLHGDGFLPYRNMKLPDTSASWFDKSMTLEECKTMCLKKCSCTAYANLDVRAGRSGCLLWFDNIVDMRIHQDQGQDIYIRLASSEFDHKKNMRNFKRAGILAGVIALVIGIAVLVLVTSVYRKKLGYIKKIFKWKYKKQNEDGDLVTIFNFLSITNATNNFSNRNKLGEGGFGPVYKGVMVDGKEIAVKRLSKTSIQGIEEFKNEVKLMATLQHRNLAKLIGCSIKQDEKLLIYEFLPNRSLDYFIFDTTRSKLLDWTKRLEIIDGIARGLLYLHQDSTLRIIHRDVKISNILLDIDMVPKISDFGLARSFMGDQAEANTNTVTGTHGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGKKNSGFCDPRHRLDLLGHAWRLWIEEKPEELIADILYDEAIYSEIIRFIHVGLLCVQQQPENRPNMSSVVFMLKGEKLLPEPSEPGFYSGRHNKNGTDFSINEATISLLEARKGQTNTNTMENHNKVLVLIVCTFFFCSMPTYCIQHTLTTNQFIQYNDTLVSAAGTFEAGFFNFGDPQRQYFGIWYKSISPRTIVWVANRDTPVQNSTAMMKLTDQGSLVIIDGSKGIIWNSNSSRVGVKPVVQLLNSGNLVLKVANNTENFLWESFDYPGNTFLAGMQLKTNLVTGPYRYLTSWRSPEDPAAGEFSYRIDTHGYPQQVTAKGATILYRGGSWNGILFTGVSWLRKHRILNFSVVFTDKEFSYQYESLNNSIITRMVLDPYGTSQRFIWSDRTQIWESISSRPTDQCDVYALCGINSNCNINGFPICECLEGFMPKFQPKWESSNWSDGCVRKTDLNCLHGDGFLPYTNMKLPDTSTSWFDKSMTLEECKTTCLKNCSCTAYASLDISDGGSGCLLWFNNIVDMRIHPDQGQEIYIRLASSELDHRKNKRNFKRAGILAGVIALIIGLTVLVLVTSIYRKKLGKPRYIKKLFNWTYKEKGDGDLVTIFDFSAITKATNNFSNKNKLGEGGFGPVYKGIMVDGQEIAVKRLSKTSGQGVEEFKNEVKLMATLQHRNLAKLIGCSIQQDEKLLIYEFLPNRSLDYFIFDTTRSKLLDWTKRLEIIDGIARGLLYLHQDSTLRIIHRDVKISNILLDINMIPKISDFGLARSFMGDQAEANTNTVTGTHGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGKKNSGFCDPRHRLDLLGHAWRLWIEDRPEELIANIFYDEAIYSEIIRFIHVGLLCVQQQPENRPNMSSVVFMLKGEKLLPEPSEPGFYAGRNHKNSTEFSINEATMSLLEAR* 1629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4680 1628 ProSiteProfiles Bulb-type lectin domain profile. 843 964 IPR001480 -
Tpr3g4680 1628 CDD B_lectin 855 968 IPR001480 -
Tpr3g4680 1628 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Tpr3g4680 1628 CDD STKc_IRAK 505 772 - -
Tpr3g4680 1628 SMART blect_4 849 968 IPR001480 -
Tpr3g4680 1628 SMART blect_4 32 151 IPR001480 -
Tpr3g4680 1628 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Tpr3g4680 1628 CDD PAN_AP_plant 335 420 - -
Tpr3g4680 1628 SMART serkin_6 499 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4680 1628 SMART serkin_6 1318 1588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4680 1628 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 21 808 - -
Tpr3g4680 1628 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 843 1627 - -
Tpr3g4680 1628 Pfam S-locus glycoprotein domain 1026 1135 IPR000858 GO:0048544
Tpr3g4680 1628 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Tpr3g4680 1628 SMART ntp_6 340 419 IPR003609 -
Tpr3g4680 1628 SMART ntp_6 1157 1236 IPR003609 -
Tpr3g4680 1628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Tpr3g4680 1628 ProSiteProfiles PAN/Apple domain profile. 1156 1237 IPR003609 -
Tpr3g4680 1628 Gene3D Transferase(Phosphotransferase) domain 1 575 776 - -
Tpr3g4680 1628 Gene3D Transferase(Phosphotransferase) domain 1 1394 1595 - -
Tpr3g4680 1628 SUPERFAMILY alpha-D-mannose-specific plant lectins 892 999 IPR036426 -
Tpr3g4680 1628 SUPERFAMILY Protein kinase-like (PK-like) 483 770 IPR011009 -
Tpr3g4680 1628 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 215 IPR036426 -
Tpr3g4680 1628 Gene3D - 22 148 IPR036426 -
Tpr3g4680 1628 Gene3D - 839 965 IPR036426 -
Tpr3g4680 1628 CDD B_lectin 38 151 IPR001480 -
Tpr3g4680 1628 CDD PAN_AP_plant 1152 1237 - -
Tpr3g4680 1628 ProSiteProfiles Protein kinase domain profile. 499 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4680 1628 Pfam PAN-like domain 339 405 IPR003609 -
Tpr3g4680 1628 Pfam PAN-like domain 1156 1222 IPR003609 -
Tpr3g4680 1628 Gene3D Phosphorylase Kinase; domain 1 1293 1393 - -
Tpr3g4680 1628 Gene3D Phosphorylase Kinase; domain 1 472 574 - -
Tpr3g4680 1628 ProSiteProfiles Protein kinase domain profile. 1318 1595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4680 1628 Pfam D-mannose binding lectin 74 177 IPR001480 -
Tpr3g4680 1628 Pfam D-mannose binding lectin 891 994 IPR001480 -
Tpr3g4680 1628 SUPERFAMILY Protein kinase-like (PK-like) 1303 1589 IPR011009 -
Tpr3g4680 1628 Gene3D Hepatocyte Growth Factor 336 422 - -
Tpr3g4680 1628 Gene3D Hepatocyte Growth Factor 1153 1239 - -
Tpr3g4680 1628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1439 1451 IPR008271 GO:0004672|GO:0006468
Tpr3g4680 1628 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 843 1627 - -
Tpr3g4680 1628 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 808 - -
Tpr3g4680 1628 CDD STKc_IRAK 1324 1591 - -
Tpr3g4680 1628 Pfam Protein tyrosine and serine/threonine kinase 502 767 IPR001245 GO:0004672|GO:0006468
Tpr3g4680 1628 Pfam Protein tyrosine and serine/threonine kinase 1320 1586 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4680 Tpr-Chr3 51776144 51789849 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4680 436 784 Receptor kinase-like Gene Family AT4G23230 51.412 6.17e-111 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g4680 PK_Tyr_Ser-Thr 7.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4680 - - var:108337036 1986.46