Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4679 ATGGAGAACCATAACAAGGTACTAATGCTAATGGTGTGTACTTTCTTCTTTTTCTCCATGCCTACTTACTCTATTCAGAACACTCTTACTTCAAATCAGTTTATCCAATACAACGATACCCTTGTTTCTGCAGCTGGAACCTTTGAAGCAGGATTTTTCAACTTTGGAGATCCACAACAATACTTTGGTATATGGTACAACAGCATATCACCAAGGACTTATGTGTGGGTTGCCAATAGAAACACGCCTGCACAAAACTCAACAGTAAAGATGAAACTTACTGATCAAGGAAGTCTTGTTATTCTTGATGGTTCCAAAGGCATTATCTGGAACTCCGATTCGTCAAGGATTGGAGTGGAACCAGTTGTTCAGCTTTTGGATTCAGGAAATCTTGTTGTAAAAGATGCAAACAACACTCAGAACTTTTTGTGGGAAAGTTTTGATTATCCTGGTGACACTCTACTTGCTGGAATGAAGCTGAAAAGTAATTCAGTTACTGGTCCATATAGATATCTCACATCTTGGAGAAGTCCTGAAGATCCTGCTACAGGAGAGTATTCATATAGGATAGATATGCATGGTTATCCTCAACTTGTTACTGAAAAGGGATCAAGAATTCTGTATAGAGGAGGGTCATGGAATGGAATTCTTTTCACTGGTGTTCCTTGGCAAAGATTGTATAGAATATATAATTTCTCAGCAGTGATCACTGACAAAGAATTCTCTTATCAATATGAAAATCTTGACAATTCAATTATTACAAGAGTAGTGCTAGACCAAAATGGAATTACACAACGTCTTACATGGTCGGATAGGACACAAATTTGGGAGGCTACTAGTACTCGTCCTGCAGACGAGTGTGATGTTTATGCTTTGTGTGGTATCAACTCTAATTGCAATGTTACTGACTTTCCAAATTGTAAATGCTTGGAAGGTTTTGTGCCAAAATTTCAAACAAAATGGAAGTCATTGAATTGGACTGATGGGTGTGTAAGGAAAACAGATTTAAATTGTTCCCATGGAGATGGATTTTTGAAGTACACAAGCATGAAGTTGCCAGATACATCATCATCATGGTTTAACAAGAGCTTGAGCCTTGAGAAATGTAAAACAATGTGTTTGAAAAACTGTTCTTGCACTGCATATGCAAATTTAGATATTAGAAATAATGGGAGTGGCTGCTTACTTTGGTTTGACAACATTGTGGACATGAGAAACTTTCCAGATCAAGGACAAGACATTTACATACGACTCTCATCTTCAGAATTAGTATATACCTCAGATCCTAAAAAGAATAAGAGGAACTCAAAGCATGCTGGGATTATTGCAGGGGTTATTGCACTCATTATAGGACTAACCCTTATTGTAATGGTCACATTAGCATATAGAAAGAAGCTTGGATGCATACGAAACTTATTTCAAAAGAAGGATATGGAAGATGGTGACTCAGCTACTATATTTGATTTTTCGACCATCACTAGTGCAACAAATCACTTCTCTAACAGAAACAAGTTAGGAGAAGGTGGTTTTGGACCAGTTTACAAGGGCATAACGGTCGATGGCCAAGAGATTGCTGTTAAGAGGCTTTCTAAAACATCAATACAAGGAATTGAGGAATTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGAAATCTTGTAAAACTTCTTGGTTGTTCTATTCGACAAGATGAAAAGTTGTTGATCTACGAATTCATGCCTAACAGAAGCTTGGATTACTTTATTTTTGATACTATACGAAGCAAACTACTAGATTGGACAAAGCGCTTGGAAATTATTGATGGGATTGCTCGGGGGCTGTTGTATCTACATCAGGATTCTAGACTACGAATCATACATAGAGATCTGAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAATGTATCAGATTTTGGTTTAGCCAGATCATTTATGGGAGACCAAGCTGAGGCTAATACAAATAGAGTGATGGGAACATATGGATATATGCCTCCAGAATATGCAGTGCATGGATCTTTCTCAATAAAATCTGATGTTTTTAGTTTTGGAGTCGTTGTTCTTGAGATAATTAGCGGTAAGAAGAATAGCGGATTTTGTGACCCTCGACGTCGTCTAAACCTTCTTGGGAACGCATGGAGATTGTGGATTGAAGAAAGGCCAGAGGAGCTAATAGCTGACATATTATACGATGAGGCCATATGTTCGGAAATATTAAGATTTATTCATGTGGGTCTATTGTGTGTACAACAGCTACCAGAAGATAGGCCTAACATGTCTTCTGTGGTCCTTATGTTAAAGGGTGAAAAGTTACTCCCCAAACCAAGTGAACCAGGGTTCTACGCAGGTAAAAATAATATGAATAGCGCAGGATCTTCAATAAATGAAGCTACAATCTCATTGTTAGAGGCCAGATGGATCCAATGTTTGGTTGTGTGGGTTGTTTTCAAGATTCTCATGTACTTGTGTGGCTGGATTTACATAAAACTTGGAGATGCCAATGCTTTTTCAAATATTTTAAGACAAACTAACACAAACACTATGGAGAACCATAATAAGGTGCTAATGCTAATGGTGTGTACTTTCTTCTTTTGCACCATGCCTACTTACTCTATTCAGCACACACTTACTCCAAATCAGTTTATACAATACAATGATACCCTTGTTTCTACAGCAGGAACCTTTGAAGCAGGATTTTTCAACTTTGGAGATCCACAACGGCAATACTTTGGTATATGGTACAACAACATATCACCGAAGACTATTGTGTGGGTTGCCAATAGAAACACACCAGTACAAAACTCAACGGCAATGATGAAACTCAATGATCAAGGAAGTCTTGTTATTCTTGATGGCTCCAAAGGCATTATTTGGTCCTCTAATTCATCAAACATTGTGGTGAAATCAGTTGTTGTGCTGTTGTTGGACTCAGGAAACCTTGTTGTGAAAGAAGCAAATAGAAGTAGCGAGAATGAGGATTTTCTGTGGGAAAGTTTTGATTATCCAGGTAACACTTTCCTTGTTGGAATGAAGCTCAAAACTAATTTAATTACTGGTCCATATAAATACCTCACATCTTGGAGAAACCCTGAAGATCCTGCTGAAGGTGAGTTTTCGTATAGGATAGATGCACGTGGTTTTCCTCAACTGGTTATTGCAAAGAAAACAATATTATTGTATAGACAAGGCTCATGGCATGAAGATGCTGATCTTTTCACTGGTATTTCTTGGCAAAGATTGTTTAGTGCCTTGAGTTTCTCAGTATTTCTCACCGACAATGAACTCTCATATCAATATCAATCTTTGAACAGTTCAATTATTACTAGAGTGGTGCTAGACCCGAATGGAATTTCACAACGTTTTCTATGGTCAGATAGGGTACAAATTTGGGAGTCCATAAAATTTAATCCTGCAGATCAGTGCGATCTTTATGCCATGTGTGGTATCAACTCTAACTGCAATATAAATGACTTTCCAACATGTGAATGCTTGGAAGGTTTCATGCCAAAATTTCAAACAAAATGGAATTCATCGAATTGGTCTGATGGGTGTGTAAGGAAGACACCTTTAAATTGTCTCCATGGAGATGTTTTTTTCAATTACACGGGCATGAAGTTGCCAGATACGTCATCATCGTGGTTTGACAACAGCTTGAGCCTTGAGGAATGCAAGACAATGTGTTTGAAAAACTGTTCTTGCACTGCATGTGCAATTGCAAATTTAGATATCACATATGGTGGAAGTGGTTGTTTACTTTGGTTTGACAACATTGTGGACATGACAAAACATCCAGACAAAGGACAAGACATTTACATACGGCTGGCATCTTCAGAATTTGATAATAAAAAGAATAAGAGTAACATGAAGCTTGCTGGGACAATAGCAGGGGTTATTTCATTCATTATAGGACTAACCGTTCTTGTATTGGTCACATCGGCATATAGAAAGAAGCTTGAACCAGGTTATATAAAAAAGTTATTTCACTGGAAACACAAGGAAGATGGTGACTTGGCAACAATATTTGATTTTTCGACAATCACTAGAGCAACAAATAACTTCTCTAATAGAAACAAATTAGGACAAGGTGGTTTTGGACCAGTGTACAAGGGCATAATGGTAGATGGCCAAGAGATTGCTGTTAAGAGGCTTTCTAAAACATCGGGACAAGGAACCGAGGAGTTCAAAAATGAAGTACAATTGATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCAATTCAACAAGATGAAAAGTTGTTGATCTACGAATTCATGCCCAACAGAAGCTTGGACTACTTCATTTATGATACTACACGAAGTAAATTACTAGATTGGACAAAGCGCTTGGAAATTATTAATGGGATTGCTCGGGGGCTGCTGTATCTGCATCAGGATTCTAGACTAAGAATCATACATAGAGATCTGAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATATCAGATTTTGGTTTAGCCAGATCATTTATCGGAGACCAAGCTGAAGCTAATACAAATAGAGTCATGGGAACATATGGATATATGCCTCCCGAATATGCAGTGCATGGATCTTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTCGTTGTTCTTGAGATAATTAGCGGTAGGAAGAATCGCGGATTTTGTGACCCTCTACATCATCTAAACCTTCTTGGTCATGCATGGAGACTATGGATTGAAGACAGGGCAAAGGAGTTAATACCTGACATGTTAGGTGATGAGGCCTTATGTTCAAAATTAATAAGATTTATTCATGTGGGTCTATTGTGTGTACAACAGAAACCAGAAAATAGGCCTAACATGTCATCTGTGGTTTATATGTTAAAGGGTGAAAATTTACTTCCCAAACCAAGTGAACCCGGATTCTATGCAGGAAGTGATAATACAAATAACACAGGATCTTCAAAAGTGTGTTCAATAAATGAAGCTTCACTCTCATTGTTAGAGGGCCGATAG 5016 0.3768 MENHNKVLMLMVCTFFFFSMPTYSIQNTLTSNQFIQYNDTLVSAAGTFEAGFFNFGDPQQYFGIWYNSISPRTYVWVANRNTPAQNSTVKMKLTDQGSLVILDGSKGIIWNSDSSRIGVEPVVQLLDSGNLVVKDANNTQNFLWESFDYPGDTLLAGMKLKSNSVTGPYRYLTSWRSPEDPATGEYSYRIDMHGYPQLVTEKGSRILYRGGSWNGILFTGVPWQRLYRIYNFSAVITDKEFSYQYENLDNSIITRVVLDQNGITQRLTWSDRTQIWEATSTRPADECDVYALCGINSNCNVTDFPNCKCLEGFVPKFQTKWKSLNWTDGCVRKTDLNCSHGDGFLKYTSMKLPDTSSSWFNKSLSLEKCKTMCLKNCSCTAYANLDIRNNGSGCLLWFDNIVDMRNFPDQGQDIYIRLSSSELVYTSDPKKNKRNSKHAGIIAGVIALIIGLTLIVMVTLAYRKKLGCIRNLFQKKDMEDGDSATIFDFSTITSATNHFSNRNKLGEGGFGPVYKGITVDGQEIAVKRLSKTSIQGIEEFKNEVKLMATLQHRNLVKLLGCSIRQDEKLLIYEFMPNRSLDYFIFDTIRSKLLDWTKRLEIIDGIARGLLYLHQDSRLRIIHRDLKTSNILLDIDMIPNVSDFGLARSFMGDQAEANTNRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGKKNSGFCDPRRRLNLLGNAWRLWIEERPEELIADILYDEAICSEILRFIHVGLLCVQQLPEDRPNMSSVVLMLKGEKLLPKPSEPGFYAGKNNMNSAGSSINEATISLLEARWIQCLVVWVVFKILMYLCGWIYIKLGDANAFSNILRQTNTNTMENHNKVLMLMVCTFFFCTMPTYSIQHTLTPNQFIQYNDTLVSTAGTFEAGFFNFGDPQRQYFGIWYNNISPKTIVWVANRNTPVQNSTAMMKLNDQGSLVILDGSKGIIWSSNSSNIVVKSVVVLLLDSGNLVVKEANRSSENEDFLWESFDYPGNTFLVGMKLKTNLITGPYKYLTSWRNPEDPAEGEFSYRIDARGFPQLVIAKKTILLYRQGSWHEDADLFTGISWQRLFSALSFSVFLTDNELSYQYQSLNSSIITRVVLDPNGISQRFLWSDRVQIWESIKFNPADQCDLYAMCGINSNCNINDFPTCECLEGFMPKFQTKWNSSNWSDGCVRKTPLNCLHGDVFFNYTGMKLPDTSSSWFDNSLSLEECKTMCLKNCSCTACAIANLDITYGGSGCLLWFDNIVDMTKHPDKGQDIYIRLASSEFDNKKNKSNMKLAGTIAGVISFIIGLTVLVLVTSAYRKKLEPGYIKKLFHWKHKEDGDLATIFDFSTITRATNNFSNRNKLGQGGFGPVYKGIMVDGQEIAVKRLSKTSGQGTEEFKNEVQLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNRSLDYFIYDTTRSKLLDWTKRLEIINGIARGLLYLHQDSRLRIIHRDLKTSNILLDIDMIPKISDFGLARSFIGDQAEANTNRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGRKNRGFCDPLHHLNLLGHAWRLWIEDRAKELIPDMLGDEALCSKLIRFIHVGLLCVQQKPENRPNMSSVVYMLKGENLLPKPSEPGFYAGSDNTNNTGSSKVCSINEASLSLLEGR* 1672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4679 1671 CDD STKc_IRAK 505 772 - -
Tpr3g4679 1671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1478 1490 IPR008271 GO:0004672|GO:0006468
Tpr3g4679 1671 CDD PAN_AP_plant 1192 1279 - -
Tpr3g4679 1671 CDD PAN_AP_plant 334 419 - -
Tpr3g4679 1671 ProSiteProfiles PAN/Apple domain profile. 1196 1279 IPR003609 -
Tpr3g4679 1671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Tpr3g4679 1671 ProSiteProfiles Protein kinase domain profile. 499 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4679 1671 CDD B_lectin 889 1006 IPR001480 -
Tpr3g4679 1671 ProSiteProfiles Bulb-type lectin domain profile. 26 146 IPR001480 -
Tpr3g4679 1671 ProSiteProfiles PAN/Apple domain profile. 338 419 IPR003609 -
Tpr3g4679 1671 SUPERFAMILY alpha-D-mannose-specific plant lectins 926 1037 IPR036426 -
Tpr3g4679 1671 Gene3D Phosphorylase Kinase; domain 1 1331 1432 - -
Tpr3g4679 1671 Gene3D Phosphorylase Kinase; domain 1 473 574 - -
Tpr3g4679 1671 Pfam S-locus glycoprotein domain 1064 1175 IPR000858 GO:0048544
Tpr3g4679 1671 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Tpr3g4679 1671 Gene3D Transferase(Phosphotransferase) domain 1 1433 1634 - -
Tpr3g4679 1671 Gene3D Transferase(Phosphotransferase) domain 1 575 777 - -
Tpr3g4679 1671 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 872 1655 - -
Tpr3g4679 1671 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 809 - -
Tpr3g4679 1671 Gene3D - 873 1003 IPR036426 -
Tpr3g4679 1671 Gene3D - 22 147 IPR036426 -
Tpr3g4679 1671 Pfam Protein tyrosine and serine/threonine kinase 502 723 IPR001245 GO:0004672|GO:0006468
Tpr3g4679 1671 Pfam Protein tyrosine and serine/threonine kinase 1360 1626 IPR001245 GO:0004672|GO:0006468
Tpr3g4679 1671 SMART serkin_6 499 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4679 1671 SMART serkin_6 1357 1604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4679 1671 ProSiteProfiles Bulb-type lectin domain profile. 877 999 IPR001480 -
Tpr3g4679 1671 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 181 IPR036426 -
Tpr3g4679 1671 Gene3D Hepatocyte Growth Factor 335 418 - -
Tpr3g4679 1671 Gene3D Hepatocyte Growth Factor 1194 1278 - -
Tpr3g4679 1671 CDD B_lectin 27 150 IPR001480 -
Tpr3g4679 1671 SUPERFAMILY Protein kinase-like (PK-like) 483 770 IPR011009 -
Tpr3g4679 1671 SUPERFAMILY Protein kinase-like (PK-like) 1342 1628 IPR011009 -
Tpr3g4679 1671 SMART ntp_6 339 418 IPR003609 -
Tpr3g4679 1671 SMART ntp_6 1197 1278 IPR003609 -
Tpr3g4679 1671 Pfam PAN-like domain 1196 1264 IPR003609 -
Tpr3g4679 1671 Pfam PAN-like domain 338 404 IPR003609 -
Tpr3g4679 1671 SMART blect_4 32 150 IPR001480 -
Tpr3g4679 1671 SMART blect_4 883 1006 IPR001480 -
Tpr3g4679 1671 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 21 809 - -
Tpr3g4679 1671 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 872 1655 - -
Tpr3g4679 1671 Pfam D-mannose binding lectin 925 1032 IPR001480 -
Tpr3g4679 1671 Pfam D-mannose binding lectin 73 176 IPR001480 -
Tpr3g4679 1671 CDD STKc_IRAK 1363 1630 - -
Tpr3g4679 1671 ProSiteProfiles Protein kinase domain profile. 1357 1634 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4679 Tpr-Chr3 51766585 51775689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4679 441 784 Receptor kinase-like Gene Family AT4G23230 52.149 5.22e-113 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g4679 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4679 - - var:108337036 1970.28