Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4677 ATGGATAACCATAATAAGGTGCTTATGCTAATGGTGTACACTTTCTTCTTTTTCCCCATGCCCACTTTCTCTAAACAGAAGACTCTTACTACTATTGCTCCAAATCAGTTTATCCAATACACTGATACGCTTGTTTCTGCAGATGGAACCTTTGAATCAGGATTTTTCAATTTTGGAGATCCACAACTCCAATACTTTGGTATATGGTACAAGAGTATATCACCGAGGACTATTGTGTGGGTTGCCAATAGAAACACCCCCGTACAAAACTCAACAGGAATGCTGAAACTCACTGATCAAGGAAGTCTTGTTATTCTCGATGGCTCCAAAGGCATTATCTGGAACTCTCATTCATCAAGAATTGGAGTGAAACCAGTGGTTCATCTTTTGGATTCAGGAAATCTTGTTTTGAAAGATGGAAACAACACTCATAACATTTTGTGGGAAAGTTTTGATTATCCTGGTAACACTTTCCTTGCTGGAATGAAGCTGAAAAGTAATTTAGTTACTGGTCCATACAGATATCTCACATCTTGGAGAAGTGCCGAAGATCCTTCTGTAGGCGATTTTCCATATTGGATAGACACACGTGGTTATCCTCAACTTGTTACTGTAAAGGGATCAAGAATTCTGTATAGAGGAGGGTCATGGAATGGAAATATGTTCACTGCTGTTTCTTGGCAAAGAAATAATAGAATCTTGAATTTCTCAGTAGTGTTCACTGACAAAGAATTCTCTTATCAATATGAAACTTTGAACAGTTCAATTATTACTAGATTGGTGCTAGATCCATACGGAAATTCACAACGTTTTCTATGGTCAGATAAGAAACAAATTTGGGTGGTTTTAGCTACTTTGCCTGCAGACCAGTGTGATGAATATGGCTTGTGTGGTATCAACTCTGATTGCAATATTAATGGATTTACAATATGTGAATGCTTGGAAGGTTTCATGCCAAAATTTCAAAAAAAATGGCAGTTATCAAATTGGTCTGATGGGTGTGTAAGGAAAACACCTTTAAATTGTCTCCATGGAGATTTATTTTTACTGTACACAAACATGAAGTTGCCAGATACATCAGCATCGTGGTTTGACAGGAGCTTGAACCTTAAGGAATGTAAGACAATGTGTTTGAAAAACTGTTCTTGCACAGCATATGCAAATTTAGATATCAGAAATGGTGGTAGTGGCTGCTTACTTTGGTTTGACAACATTGTGGATATGAGAAAACATCCGGGCATAGGACAAGACATTTACATACGACTCGCATCTTCAGAACTTGATCATAAAAAGAATAAGAGGAACTTGAAGCTTTATGGGACTCTAGCAGGGGTTGTTGCATTCATTATAGGACTAACCATTCTTGTAGTGGTCACGTATAGAAAGAAGCTTGATAAACCAGGGTATATAAAAAAGTTATTTCACCGGAAGCACAAGAAGGAGAAGGAAGATGGTGATTTGGAAACAATATTTGATTTTTCGACAATCACAAATGCAACAAATAACTTCTCTGACAGAAACAAGTTAGGAGAAGGTGGGTTTGGACCAGTGTACAAGGGAATAATGGTAGATGGCCAAGAGATTGCTGTTAAGAGGCTCTCAGAAACATCGGGACAAGGAATTCAGGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTCCAACACCGAAATCTTGTAAAACTTCTTGATACTAGACGAAGTAAATTACTAGATTGGACAAAGCGCTTGGAAATTGTTGATGGGATTGCTCGGGGTCTGCTGTATCTGCATCAGGATTCTAGGCTAAGAATCATACATAGAGATCTGAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATATCAGATTTCGGTTTAGCAAGATCATTTATGGGAGACCAAGCTGAGGCTAATACAAATAGAGTGATGGGAACATATGGATATATGCCTCCAGAATATGCAGTGCATGGATATTTCTCAATAAAATCAGATGTTTTTAGTTTTGGAGTTGTTGTACTTGAGATAATTAGCGGTAGGAAGAATCGCGGATTTTGTGACCCTGTACATCATCTAAACCTTCTCGGTCATGCATGGAGACTATGGATTGAAGAAAGGCCAGAGGAGTTAATATCTGACATATTATATGATGATGCCGTATATTCAAAAATAATAAGATTTATTCATGTTGGTCTATTGTGTGTACAACAGAAACCAGAAAACCGGCCTGACATGTCATCTGTGGTTTATATGTTAAAGGGTGAAAATTTACTCCCCAAACCAAGTGAACCCGGGTTCTATGCAGGAAATAACAATACAAACAACATAGGATCTTCTTCGAACGGGCGTTTGATAAACGAAGCTAATTCACTCTCATTGTTAGAGGGACAAACTAACACAAACACTATGGAGAATATCACAAAGTTGCTTATGCTAATGGTGTGTACTTTCTTCTTTTGCACCATGCCTACTTACTCTATTCAGCACACACTTACTCCAAATCAGTTTATACAATACAATGATACCCTTGTTTCTGCAGCAGGAACATTTGAAGCAGGATTTTTCAACTTTGGAGATCCACAACGGCAATACTTTGGTATATGGTACAAGAGAATATCACAATCACAAAGGACTATTGTGTGGGTTGCCAATAGAAATACCCCGGTACAACACTCAACAGCAATGCTGAAACTCAATGATCAGGGAACGATTGTTATTCTTGATGGCATCAAAGGCATTATCTGGAACTCCAATTCATCAAGAATTGGAGTGAAACCAGTTGTTCAGCTTTTGGATTCAGGTAATCTTGTTCTGAAAGATGGAAACAACACTCGGGACTTTTTGTGGGAGAGTTTTGATTATCCGGGTAACACTTTCCTTGCTGGAATGAAGCTGAAATGTAATTTAGTTACTGGTCCATATAAATATCTCACATCTTGGAGAAACCCTGAAGATCCTGCTGAAGGCGAGTTTTCATTTAAGATATATACACATGGTTATCTTCAACAGTTTACTACAAACGGAGCAAGAATTCTGTATAGAGGAGGGTCATGGAATGGAATTCGTTTCACTGGTGTTGTTTGGCAAAGAAATAATAGAATTGTGAATTTCTCAGTAGTGTTCACTGACAAAGAAGTCTCTTATCAATATGACACTTTGATCAATTCAAATATTGCGAAAGTGGTGCTAGATCCAAATGGAAATGCACAACGTTTTCTATGGTTAGATACGAAACAAATTTGGGTAGTTACAGCTACTAGTCCTTCAGACCAGTGTGACGAATATGCCTTGTGTGGCATCAACTCTAACTGCAATATAAATGACTTTCCAATATGTGAATGCTTGGAAGGTTTCATGCCAAAATTTCAAACAAAATGGAAGTCATCGAATTGGTCTGATGGGTGTGTAAGGAAAACACAATTAAATTGTCTCCATGGAGACGGATTTTTACCGTACACCAACATGAAGTTGCCAGATACGTCAGAATCGTGGTTTGACAGGAGCATGACCCTTGAGGAATGCAAGACAACGTGTTTGAAAAACTGTTCTTGCACTGCATATGCAAATTTAGATATCAGCAATGGTGGTAGTGGCTGCTTACTTTGGTTTGACAACATTGTGGATATGAGAAAACATCCGGGCATAGGACAAGACATTTACATACGACTCGCATCTTCAGAGCTTGATCATAAAAAGAATAAGAGGAACTTGAAACTTTATGGGACTCTAGCAGGGGTTATTGCATTCATTATAGGACTAACCGTTCTTGTATTGGTCGCGTATAGAAAGAAGCTTCATAAACCAGGTTATATAAAAAAGTTATTTTACTGGAAGTACAATAAGGAGAAGGAAGATGGTGACTTGGTAACGATATTTGATTTTTGGGCGATCACAAATGCAACAAATAATTTCTCCAATAGAAACAAGTTAGGAGAAGGTGGTTTTGGACCAGTATACAAGGGCATAATGGAAGATGGCCAAGAGATTGCTGTTAAGAGGCTCTCTGAAACATCAGGACAAGGAATTGAGGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTCCAACACCGAAATCTTGTAAAACTTCTAGGTTGTTCTATTCAACAAGATGAAAAGTTATTGATCTACGAATTTATGCCCAACAGAAGCTTGGACTACTTCATTTATGATACAGCACGAAGTAAATCACTAGATTGGACAAAGCGCTTGGAAATTATTGATGGGATTGCTCGGGGTCTGCTCTATCTGCATCAGGATTCTAGACTAAGAATCATACATAGAGATTTGAAGACAAGCAATATTCTTCTTGATATTGATATGATTCCGAAGATAGCAGATTTCGGTTTAGCCAGATCATTTATGGGAGATCAAGCCGAAGCTAATACAAATAGAGTGATCGGAACATATGGATATATGCCTCCGGAATATGCAGTGCATGGATCTTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTCGTTGCACTTGAGATAATTAGCGGTAGGAAGAATCGCGGATTTTGTGACCCTCTACATCATCTAAACCTTCTTGGTCATGCATGGAGACTATGGAGCGAAGACAGGGCAAAGGAGTTAATTGCTGACATATTAGACGATGAGGCCATGTGTTCAAAAATAATAAGATTTATTCATGTGGGTCTATTGTGTGTACAACAGAAACCAGAGAATAGGCCTAACATGTCATCTGTGGTTTATATGTTAAAGGGTGAAACTTTAATCCCCAAACCAAGTGAACCCGGATTCTATGCAGGAAGTGATAATACAAATGACATAGAATCTTCTTCAAAAGGGTGTTCAATAAATGAAGTTTCAATCTCGTTAGAGGGCCGGTAG 4845 0.3806 MDNHNKVLMLMVYTFFFFPMPTFSKQKTLTTIAPNQFIQYTDTLVSADGTFESGFFNFGDPQLQYFGIWYKSISPRTIVWVANRNTPVQNSTGMLKLTDQGSLVILDGSKGIIWNSHSSRIGVKPVVHLLDSGNLVLKDGNNTHNILWESFDYPGNTFLAGMKLKSNLVTGPYRYLTSWRSAEDPSVGDFPYWIDTRGYPQLVTVKGSRILYRGGSWNGNMFTAVSWQRNNRILNFSVVFTDKEFSYQYETLNSSIITRLVLDPYGNSQRFLWSDKKQIWVVLATLPADQCDEYGLCGINSDCNINGFTICECLEGFMPKFQKKWQLSNWSDGCVRKTPLNCLHGDLFLLYTNMKLPDTSASWFDRSLNLKECKTMCLKNCSCTAYANLDIRNGGSGCLLWFDNIVDMRKHPGIGQDIYIRLASSELDHKKNKRNLKLYGTLAGVVAFIIGLTILVVVTYRKKLDKPGYIKKLFHRKHKKEKEDGDLETIFDFSTITNATNNFSDRNKLGEGGFGPVYKGIMVDGQEIAVKRLSETSGQGIQEFKNEVKLMATLQHRNLVKLLDTRRSKLLDWTKRLEIVDGIARGLLYLHQDSRLRIIHRDLKTSNILLDIDMIPKISDFGLARSFMGDQAEANTNRVMGTYGYMPPEYAVHGYFSIKSDVFSFGVVVLEIISGRKNRGFCDPVHHLNLLGHAWRLWIEERPEELISDILYDDAVYSKIIRFIHVGLLCVQQKPENRPDMSSVVYMLKGENLLPKPSEPGFYAGNNNTNNIGSSSNGRLINEANSLSLLEGQTNTNTMENITKLLMLMVCTFFFCTMPTYSIQHTLTPNQFIQYNDTLVSAAGTFEAGFFNFGDPQRQYFGIWYKRISQSQRTIVWVANRNTPVQHSTAMLKLNDQGTIVILDGIKGIIWNSNSSRIGVKPVVQLLDSGNLVLKDGNNTRDFLWESFDYPGNTFLAGMKLKCNLVTGPYKYLTSWRNPEDPAEGEFSFKIYTHGYLQQFTTNGARILYRGGSWNGIRFTGVVWQRNNRIVNFSVVFTDKEVSYQYDTLINSNIAKVVLDPNGNAQRFLWLDTKQIWVVTATSPSDQCDEYALCGINSNCNINDFPICECLEGFMPKFQTKWKSSNWSDGCVRKTQLNCLHGDGFLPYTNMKLPDTSESWFDRSMTLEECKTTCLKNCSCTAYANLDISNGGSGCLLWFDNIVDMRKHPGIGQDIYIRLASSELDHKKNKRNLKLYGTLAGVIAFIIGLTVLVLVAYRKKLHKPGYIKKLFYWKYNKEKEDGDLVTIFDFWAITNATNNFSNRNKLGEGGFGPVYKGIMEDGQEIAVKRLSETSGQGIEEFKNEVKLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNRSLDYFIYDTARSKSLDWTKRLEIIDGIARGLLYLHQDSRLRIIHRDLKTSNILLDIDMIPKIADFGLARSFMGDQAEANTNRVIGTYGYMPPEYAVHGSFSIKSDVFSFGVVALEIISGRKNRGFCDPLHHLNLLGHAWRLWSEDRAKELIADILDDEAMCSKIIRFIHVGLLCVQQKPENRPNMSSVVYMLKGETLIPKPSEPGFYAGSDNTNDIESSSKGCSINEVSISLEGR* 1615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4677 1614 ProSiteProfiles Protein kinase domain profile. 1300 1577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4677 1614 Pfam S-locus glycoprotein domain 1009 1118 IPR000858 GO:0048544
Tpr3g4677 1614 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Tpr3g4677 1614 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 185 IPR036426 -
Tpr3g4677 1614 Gene3D Phosphorylase Kinase; domain 1 1274 1375 - -
Tpr3g4677 1614 Gene3D Phosphorylase Kinase; domain 1 475 561 - -
Tpr3g4677 1614 CDD STKc_IRAK 1306 1573 - -
Tpr3g4677 1614 SUPERFAMILY alpha-D-mannose-specific plant lectins 875 982 IPR036426 -
Tpr3g4677 1614 Gene3D Transferase(Phosphotransferase) domain 1 562 751 - -
Tpr3g4677 1614 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 819 1590 - -
Tpr3g4677 1614 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 563 - -
Tpr3g4677 1614 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 564 774 - -
Tpr3g4677 1614 ProSiteProfiles Bulb-type lectin domain profile. 824 947 IPR001480 -
Tpr3g4677 1614 Gene3D Transferase(Phosphotransferase) domain 1 1376 1577 - -
Tpr3g4677 1614 ProSiteProfiles PAN/Apple domain profile. 342 423 IPR003609 -
Tpr3g4677 1614 ProSiteProfiles PAN/Apple domain profile. 1139 1220 IPR003609 -
Tpr3g4677 1614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Tpr3g4677 1614 Gene3D - 24 151 IPR036426 -
Tpr3g4677 1614 Gene3D - 820 948 IPR036426 -
Tpr3g4677 1614 SUPERFAMILY Protein kinase-like (PK-like) 1283 1571 IPR011009 -
Tpr3g4677 1614 Pfam Protein kinase domain 504 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4677 1614 SUPERFAMILY Protein kinase-like (PK-like) 489 748 IPR011009 -
Tpr3g4677 1614 CDD PAN_AP_plant 338 423 - -
Tpr3g4677 1614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1421 1433 IPR008271 GO:0004672|GO:0006468
Tpr3g4677 1614 SMART ntp_6 343 422 IPR003609 -
Tpr3g4677 1614 SMART ntp_6 1140 1219 IPR003609 -
Tpr3g4677 1614 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 20 563 - -
Tpr3g4677 1614 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 564 774 - -
Tpr3g4677 1614 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 819 1590 - -
Tpr3g4677 1614 Gene3D Hepatocyte Growth Factor 340 415 - -
Tpr3g4677 1614 Gene3D Hepatocyte Growth Factor 1136 1212 - -
Tpr3g4677 1614 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Tpr3g4677 1614 ProSiteProfiles Protein kinase domain profile. 503 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4677 1614 Pfam PAN-like domain 1139 1205 IPR003609 -
Tpr3g4677 1614 Pfam PAN-like domain 342 408 IPR003609 -
Tpr3g4677 1614 CDD B_lectin 836 951 IPR001480 -
Tpr3g4677 1614 Pfam Protein tyrosine and serine/threonine kinase 1303 1569 IPR001245 GO:0004672|GO:0006468
Tpr3g4677 1614 Pfam Protein tyrosine and serine/threonine kinase 568 745 IPR001245 GO:0004672|GO:0006468
Tpr3g4677 1614 SMART serkin_6 503 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4677 1614 SMART serkin_6 1300 1547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4677 1614 SMART blect_4 830 951 IPR001480 -
Tpr3g4677 1614 SMART blect_4 35 154 IPR001480 -
Tpr3g4677 1614 CDD B_lectin 43 154 IPR001480 -
Tpr3g4677 1614 Pfam D-mannose binding lectin 77 180 IPR001480 -
Tpr3g4677 1614 Pfam D-mannose binding lectin 874 977 IPR001480 -
Tpr3g4677 1614 CDD PAN_AP_plant 1135 1220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4677 Tpr-Chr3 51753593 51765393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4677 443 762 Receptor kinase-like Gene Family AT4G23230 48.725 1.07e-95 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g4677 PK_Tyr_Ser-Thr 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4677 - - var:108337036 1910.96