Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4676 ATGGAGAACCATAATAAGGTGCTATTGCTAATTGTTTGTACTTTCTTATTTTTCTCCATGCCCACTTTCTCTAAACAAAACACACTTACTATTATTACTCCAAATCAGTTTATCCAATACGGTGATACGCTTGTTTCTGCAGCTGGAACCTTTGAAGCGGGATTTTTCAATTTTGGAGATCCACAACGCCAATACTTTGGTATATGGTACAAGAGCATATCACCGAGGACTATTGTGTGGGTTGCCAATAGAAACACCCCCATACAAAACTCAACAGGAATGCTGAAACTCACTGATCAAGGAAGTCTTGTTATTCTTGATGGCTCTAAAGGCATTATCTGGAACTCCAATTCATCAAAAATTGGAGTGAAACCAGTTGTTCAGCTTTTGGACTCCGGAAATCTTGTTCTAAAAGTTGCAAACAACATGGAGAACTTTTTGTGGGAAAGTTTTGATTATCCTGGTAACACTTTCCTTGCTGGAATGAAGCTGAAAAGTAATTTAGTTACTGGTCCATATAGATATCTCACATCTTGGAGAAACCCTGAAGATCCTGCGGAAGGTGATTTTTCATATAGGATAGACACACATGGTTTTCCTCAACTGGTTACTGAAAAGGGAGCAAGACTCTTGTATAGAGCCGGATCATGGAATGGATTTCTTTTCACTGGTGTTTCTTGGCAAATAATGCATAGAGTCTTGAATTTCTCAGTAGTGTTCTCTGACAAAGAATTCTCTTATCAATATGAAACTTTGAAAAGTTCAACTATTACTAGAATGGTGCTAGATCCTTACGGAAATTCACAACGTTTTGTATGGTCAGATAGGACACAAATTTGGGAGGCTATAGCTAATCGGCCTGCAGACCAGTGTGATAATTATGCTTTGTGTGGTATCAACTCTAACTGCAATATTAATGACTTTCCAATATGTGAATGCTTGGAAGGTTTCGTGCCAAAATTTCCCAAGGAATGGAAGTCATCAAATTGGTCTGATGGGTGTGTAAGGAAAACACCTTTAAATTGTCTCCATGGAGATGGATTTTTACCGTACACAAACATGAAGTTGCCAGATACATCAGCATCGTGGTTTGACAAGAGCTTGAGCCTTGAGGAATGCAAGACAATGTGTTTGAAAAACTGTTCTTGCACTGCATATGCAAATTTAGATATCAGAAATGGTGGTAATGGCTGCTTACTTTGGTTCAACAATATTGTGGACATGAGAAAACATACGGACCTAGGACAGGATATTTATGTACGACTCGCATCTTCAGAACTTGATCATAAAAAGAATAAGAGGAACATGAAGCATGCTGGGACTTTTGCAGGGATTATTGCATTCCTTTTAGGAATAACCCTTATTGTAACGGTCACATCAGCATATAGAAAGAAGCTTGGATGTCGACAAAAGTTATTTCACAAGAAGGAGAAGGAAGATGGCGACTCGGCAACAATATTTGATTTTTCGATCATCGCTAGTGCAACAAATCACTTCTCCAACAGAAACAAGATAGGAGAAGGTGGTTTCGGACCAGTGTACATGGGCACAATGGTAGATGGCAGAGAGATTGCTGTTAAGAGGCTTTCTAAAACATCAGGACAAGGAATTGAGGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTCCAACACCGGAATCTTGTAAAACTTCTTGGTTGCTCTATTCAACAGGATGAAAAGCTGTTAATCTATGAATTCATGCCCAACCGAAGCTTGGATAACTTTATTTTTGATACTAGGCGAAGCAAATTTCTAGATTGGACAAAGCGCTTGGAAATTATTGATGGGATTGCTCGGGGGCTGTTATATCTGCATCAGGATTCTACACTAAGAATCATACATAGAGATCTGAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATAGCAGATTTTGGTTTAGCCAGATCATTTATGGGAGACCAAGCCGAGGCTAATACAAATAGAGTCATGGGAACATATGGATATATGCCTCCAGAATATGCAGTGCATGGATCTTTCTCCATAAAATCTGATGTGTTTAGCTTTGGAGTCGTTGTTCTTGAGATAATTAGCGGTAAGAAGAATAGTGGATTTTGTGACCCTCGACATCGTCTAAACCTTCTTGGGCATGCATGGAGATTATGGATTGAAGAAAAGCCAGAGGAGTTAATAGCTGACATATTATATGATGAGGCGATATGTTCAGAAATAATAAGATTTATTCATGTGGGTCTATTGTGTGTACAACAGCAACCAGAAAATAGGCCTAACATGTCATCTGTGGTCTTTATGTTAAAGGGTGAAAAGTTACTCCCCAATCCAAGTGAACCCGGGTTCTATGCAGGAAGAAATAATACAAATAGCACCGGATCTTCTTCAAACGGGTGTTCAATAAATGAAGCTTCAATCTCATTGTTAGAGGCCAGATAG 2445 0.3877 MENHNKVLLLIVCTFLFFSMPTFSKQNTLTIITPNQFIQYGDTLVSAAGTFEAGFFNFGDPQRQYFGIWYKSISPRTIVWVANRNTPIQNSTGMLKLTDQGSLVILDGSKGIIWNSNSSKIGVKPVVQLLDSGNLVLKVANNMENFLWESFDYPGNTFLAGMKLKSNLVTGPYRYLTSWRNPEDPAEGDFSYRIDTHGFPQLVTEKGARLLYRAGSWNGFLFTGVSWQIMHRVLNFSVVFSDKEFSYQYETLKSSTITRMVLDPYGNSQRFVWSDRTQIWEAIANRPADQCDNYALCGINSNCNINDFPICECLEGFVPKFPKEWKSSNWSDGCVRKTPLNCLHGDGFLPYTNMKLPDTSASWFDKSLSLEECKTMCLKNCSCTAYANLDIRNGGNGCLLWFNNIVDMRKHTDLGQDIYVRLASSELDHKKNKRNMKHAGTFAGIIAFLLGITLIVTVTSAYRKKLGCRQKLFHKKEKEDGDSATIFDFSIIASATNHFSNRNKIGEGGFGPVYMGTMVDGREIAVKRLSKTSGQGIEEFKNEVKLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNRSLDNFIFDTRRSKFLDWTKRLEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDIDMIPKIADFGLARSFMGDQAEANTNRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGKKNSGFCDPRHRLNLLGHAWRLWIEEKPEELIADILYDEAICSEIIRFIHVGLLCVQQQPENRPNMSSVVFMLKGEKLLPNPSEPGFYAGRNNTNSTGSSSNGCSINEASISLLEAR* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4676 814 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Tpr3g4676 814 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Tpr3g4676 814 CDD STKc_IRAK 505 772 - -
Tpr3g4676 814 ProSiteProfiles PAN/Apple domain profile. 342 423 IPR003609 -
Tpr3g4676 814 CDD PAN_AP_plant 338 423 - -
Tpr3g4676 814 Pfam D-mannose binding lectin 77 180 IPR001480 -
Tpr3g4676 814 Pfam Protein tyrosine and serine/threonine kinase 502 767 IPR001245 GO:0004672|GO:0006468
Tpr3g4676 814 ProSiteProfiles Protein kinase domain profile. 499 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4676 814 Gene3D Phosphorylase Kinase; domain 1 472 574 - -
Tpr3g4676 814 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 814 - -
Tpr3g4676 814 Pfam PAN-like domain 342 408 IPR003609 -
Tpr3g4676 814 SUPERFAMILY Protein kinase-like (PK-like) 484 770 IPR011009 -
Tpr3g4676 814 Gene3D - 24 151 IPR036426 -
Tpr3g4676 814 SMART serkin_6 499 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4676 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Tpr3g4676 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 185 IPR036426 -
Tpr3g4676 814 PIRSF SRK 2 814 IPR024171 GO:0004674
Tpr3g4676 814 Gene3D Transferase(Phosphotransferase) domain 1 575 776 - -
Tpr3g4676 814 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 20 814 - -
Tpr3g4676 814 SMART ntp_6 343 422 IPR003609 -
Tpr3g4676 814 Gene3D Hepatocyte Growth Factor 340 421 - -
Tpr3g4676 814 SMART blect_4 35 154 IPR001480 -
Tpr3g4676 814 CDD B_lectin 41 154 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4676 Tpr-Chr3 51744761 51753486 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4676 480 784 Receptor kinase-like Gene Family AT4G23230 58.387 1.20e-119 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g4676 PK_Tyr_Ser-Thr 4.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4676 - - gmx:100819820 1154.04