Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4673 ATGGAAGCTAATAACCACACACAACAAACCATCATCATTAGCACATACAAGATGCTCATGCTAATACTGCACACTTTCTTCTTCTGCTTCATTCCCTCTTTATCTATGCAATATGAAACTTTTGTTATTATTACACCAGATCATTCTATCCAAGGTAATCAGACTTTGGTGTCTTCAGCTGGGACTTTTGAAGCTGGATTCTTCAACTTTGGAAATGTACAACTCCAATACTTTGGTATATGGTACAAAACCATATCACCTAGGACCTATGTTTGGGTTGCTAATAGAGATGCTCCGGTACAAAACTCAAAAGCAATTCTAAAACTTACTGATCAAGGAAGTCTTATTATTACTATTCTGGATGTTTCTAGGAGCATTGTTGTATGGTCCTCCAATGCATCAACAGTTGCGGAAAAACCGGTCATGCAACTTTTAGATTCAGGAAATCTTGTTGTGAAAGATGGTGAGAAGATTTTGTGGGAGAGTTTTGATTACCCTGGTGACAATTTCCTTGCAGGAATGAAGCTTAAGAGTAATTTAGTAAATGGTACTTATAGGTCTCTCACATCTTGGAAAAGTGTTGAAGATCCTTCTCTTGGTGAGTTTTCTTATCACATAGATGTTCATGGATTTCCTCAATTAGTTACTACAAAGGGAAAAACTTTGTTTAGTAGAGGAGGACCATGGAATGGTTATGCTTTTGGTGCAATTTCATGGCTAAGGAATCTTAAGTTGTTCAAATTTTCTCTAGTTTTCACTGACATGGAAGTTTCTTATGAATACGAAACATTGAAAAAAGAAACTATTACTAGATTATGGCTTAATCCATCAGGTCTTGCACAAAGATTGGTATGGTCAGATACGAAAAGAGATTGGGAGATTATATCGACTCGTCCGATGGATCAGTGTGAGTATTATTCAAGTTGTGATGATAATTCTATCTGCAATATTACAAATTCTCCAAGAACATGTCAATGCTTGGAAGGTTTCATCCCAAAGTACAATGAAAAATGGAATTCTTTAGAATGGTCTGGTGGATGTGTTAGAAGAATAAGGTTAAATTGTATTGGAGATGGATTTCTAAAGCACTCAGGAGTAGAGTTGCCAGATACCTCCTCTTCCTGGTTTAACAATAGCTTGAGCCTTAAGGAATGTGAGAAAATGTGTTTGAAAAATTGCTCTTGTACAGCATATGCAAGTTTAGATATTAAAAGTAATAGTGGCTGCTTGCTTTGGTTTGGTAAGATAAGGGACTTGACGAAACATATAGACCAAGGACAAGATATTTTCATAAGACTGGCAACTTCAGAGTTAGGTCATAAGAGAAACAATTGGAGCTTTAAAAACAAGAAGCTTGCAGGGGCACTAGGAGCAGGGGGAGTCATTTTATTCATCATGATTCTTGGAGTGGCAACATTTACATATATAAAGAGAAATAAGCTTGCAAAGCCAGGGATGCTAAAAATATTTCACAGGAAGTACAAAAGGGAGAAGGAAGATGTGCAATTATCAACAATATTTGGTTTTTCAACCATATCTAATGCAACAAATCACTTTTCAGACAGTAACAAGTTAGGACAAGGTGGTTTTGGACCGGTATACAAGGGCATATTGGACGATGGACTAGAGATTGCAGTCAAGAGGCTATCAGAAACTTCTGCACATGGAGAAGAACAATTCAAAAATGAAGTCATGTTGATGGCAAAGCTTCAACACCGCAATCTTGTAAAACTTCTTGGTTGTTCAATTCATCAAGAGGAAAGGCTTTTGATCTATGAATTCATGCCCAACAGAAGCTTGGATTATTTCATTTTTGATTCAACTCGAAAGGAACAGCTAGGTCTGATAAAACGGTTCCAAATTATTGACGGGATTGCTCGTGGGATGCTATATCTTCATCAAGACTCTAGATTAAGAATCATCCATAGAGACTTGAAAACTAGCAATATTCTTCTTGATAGTGATATGAATCCAAGAGTATCAGATTTTGGTCTAGCCAGAACATTTCGAGGAGATCTAGACGAGTCCAATACAAATAGATTGATGGGAACATATGGTTATATGCCACCTGAATATGCTGTGCATGGATCATTTTCAATTAAATCCGATGTTTTTAGCTTTGGTGTAATTGTTTTGGAGGTAATTAGTGGGAGAAAGATTCGAAATTTTTTTGACCCTTGTCATCATCTTAATCTTCTTGGTCATGCATGGAGACTATGGAATGAAGAAAAGGCACAAGAGCTCATAGATGATATATTCCATGGTACAACTATTCCATGTGAAATATTGAAATGTATTCATGTTGGTCTACTATGTGTGCAACAAATACCAGAACATAGACCAAACATGTCATCTGTGGTCTTAATGTTGAATGGTGAAAAACTGTTGCCTGATCCTAGCCAACCTGGGTTCTATACTGCAACAGCTCATCATCCAATTCAGGTAGAATCTTCTTCAAGTTATGGAGATTGTTCACAAAATGAAGCTTCTGTGACATTATTAGAGGCGCGATAG 2514 0.3683 MEANNHTQQTIIISTYKMLMLILHTFFFCFIPSLSMQYETFVIITPDHSIQGNQTLVSSAGTFEAGFFNFGNVQLQYFGIWYKTISPRTYVWVANRDAPVQNSKAILKLTDQGSLIITILDVSRSIVVWSSNASTVAEKPVMQLLDSGNLVVKDGEKILWESFDYPGDNFLAGMKLKSNLVNGTYRSLTSWKSVEDPSLGEFSYHIDVHGFPQLVTTKGKTLFSRGGPWNGYAFGAISWLRNLKLFKFSLVFTDMEVSYEYETLKKETITRLWLNPSGLAQRLVWSDTKRDWEIISTRPMDQCEYYSSCDDNSICNITNSPRTCQCLEGFIPKYNEKWNSLEWSGGCVRRIRLNCIGDGFLKHSGVELPDTSSSWFNNSLSLKECEKMCLKNCSCTAYASLDIKSNSGCLLWFGKIRDLTKHIDQGQDIFIRLATSELGHKRNNWSFKNKKLAGALGAGGVILFIMILGVATFTYIKRNKLAKPGMLKIFHRKYKREKEDVQLSTIFGFSTISNATNHFSDSNKLGQGGFGPVYKGILDDGLEIAVKRLSETSAHGEEQFKNEVMLMAKLQHRNLVKLLGCSIHQEERLLIYEFMPNRSLDYFIFDSTRKEQLGLIKRFQIIDGIARGMLYLHQDSRLRIIHRDLKTSNILLDSDMNPRVSDFGLARTFRGDLDESNTNRLMGTYGYMPPEYAVHGSFSIKSDVFSFGVIVLEVISGRKIRNFFDPCHHLNLLGHAWRLWNEEKAQELIDDIFHGTTIPCEILKCIHVGLLCVQQIPEHRPNMSSVVLMLNGEKLLPDPSQPGFYTATAHHPIQVESSSSYGDCSQNEASVTLLEAR* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4673 837 PIRSF SRK 11 837 IPR024171 GO:0004674
Tpr3g4673 837 Pfam Protein tyrosine and serine/threonine kinase 522 787 IPR001245 GO:0004672|GO:0006468
Tpr3g4673 837 ProSiteProfiles PAN/Apple domain profile. 355 434 IPR003609 -
Tpr3g4673 837 Gene3D Transferase(Phosphotransferase) domain 1 595 796 - -
Tpr3g4673 837 ProSiteProfiles Bulb-type lectin domain profile. 41 165 IPR001480 -
Tpr3g4673 837 CDD PAN_AP_plant 353 434 - -
Tpr3g4673 837 CDD B_lectin 47 166 IPR001480 -
Tpr3g4673 837 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 33 837 - -
Tpr3g4673 837 Gene3D Hepatocyte Growth Factor 355 431 - -
Tpr3g4673 837 SUPERFAMILY Protein kinase-like (PK-like) 501 790 IPR011009 -
Tpr3g4673 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Tpr3g4673 837 SMART blect_4 47 166 IPR001480 -
Tpr3g4673 837 Pfam S-locus glycoprotein domain 225 333 IPR000858 GO:0048544
Tpr3g4673 837 ProSiteProfiles Protein kinase domain profile. 519 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4673 837 ProSiteProfiles EGF-like domain profile. 299 336 IPR000742 -
Tpr3g4673 837 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 230 IPR036426 -
Tpr3g4673 837 CDD STKc_IRAK 525 792 - -
Tpr3g4673 837 SMART ntp_6 355 433 IPR003609 -
Tpr3g4673 837 Gene3D Phosphorylase Kinase; domain 1 486 594 - -
Tpr3g4673 837 SMART serkin_6 519 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4673 837 Pfam D-mannose binding lectin 89 192 IPR001480 -
Tpr3g4673 837 Gene3D - 40 163 IPR036426 -
Tpr3g4673 837 Pfam PAN-like domain 357 418 IPR003609 -
Tpr3g4673 837 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 33 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4673 Tpr-Chr3 51718036 51721701 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4673 462 804 Receptor kinase-like Gene Family AT4G23230 51.594 1.46e-119 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g4673 PK_Tyr_Ser-Thr 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4673 - - gmx:100803275 1200.27