Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4668 ATGGTTCAAAGAAAGGTTCAAAATAAGCTTAGTATCAATATTCAACATGTTAAATCAGAGAAATTTTTAGCAAACATGAAAATTTCTTCATCTTCATCTCATCAAAACCAAGATGGAAAAACAAAAGTTTCTGATATGAAGAAGAAAATGAAGAAATCAAAGTTAGTAAAAATTTCTGATCTTGAAACTCTTCAACTTCAACAATCAACACCACCTTCATCAGTTTCAAGAAGAACAACAACACAAGATTGTTCACCAAATTACATGAAACCCACAAGTAGTTCACAATCAAAAAAGGAACTTTTTCATGTGGGTCTTAGAAAAACTCAATCTTGTTCTGTTATTGAGAATCTTGATAGAAAATTTTCAAGTGAATCAAAAGCTATATGTAAAAAACCTAGTTTGAGTTTGGTTAGAACATTAACAAAAACTACTAGTTTCAAAGGTTGTAGAAATTTTCCTAGAAAATCAACAAGAGCTACTTGTTCTTCAACTTTGAAAGATGCAAAATTTCCTTCATATCTTAAGCTTAATCCTGGTGGAACTGAGTTAGAAGGAAGTTCAGTTATGAGGGTTTGTTCATATAGTTATTGTTCTCTTAATGGTCATCATCATCATAATTATGGTGATTTGCCTCCTTTGAAGACGTTTATGTCTTCGAGGAGACGTGTTTTGAAGCGGGTGAAGCTTGAAGCGCTGAGTCCTCGAAGTCGAAGATTGAAGGTGGTGGGTGAGGTGGAAAAGAAGGGCTGTGATGTTGAGCATAATGTGTTTGATGAAAAGCCTGAGCATGATGAAATTGGCATGGATTTCTTCATTGAAATATATGCTGATGAAAAAAAGGATGCAGAATCTACAGGTGAAGAAGAAATTGGGAAAACCGATTTTCTCGAAGATGTTGTGGATCATGAAGGTATCATCAAGTCAAAAATTGAAGATGATGGTATAGAAGCAGATTTTCTGAAAAAGGTCGAGGATCAAGAGAAAAATGAAGTTGCAGATGAAGATCAACAAACTAGTTGGTCTCATGAAGAAATGAGTATGGAGGGTGCCGACAATAACATGGATGATTCTGATTCGGAGGCCGGTGATATGGAGTGTGAAGAGGAACAATTTTATGGATTTGGTCATGAACATGAGGCTGATTCTTCTGTTTACACAGATGAGGAAAATGATTCAAAATCTGAGTCCTCATCTCAGAGTTCTCATGATGTGTCAGTGATATGGTTAGATGATATCCTTAGCAGCTATTATGATGATATTATTCTTGTTGATGAAACAATCAAAGAAGCCAAATCAGAAGAAAAAATCTATCTTGAAGAACAGCCTCAAGATGACAAAAGTGGAAGCAATGAGACTCAAGAAATCGGTTACCCCTGCAGTGATGTCGGTTGCGACCAATCTTCTTTGGCAGATGAAATATTTGATTACCTGATAAACGCTGAAGAAAATGTTGATGAGACTAGCCAAGAGAACAAAGATGATAACATCAACAAAGTGAAGATCCAAATTCAACCGTCTCCGAGTGGATTTGAACTGTGTTCCTTGAGGCCAACAGACCAAACTCTTACAGCTGATCAGGCACCTCATGAAGAGAAGAGTCAAATTCAATTATTTGATGTGGTTGAAGAAATCATCAAAGATATTCAAGATCAAGGCAAAGGTAATAAAAGAACAAGTTGCAGAGTTGATGAAGAGGAAGAGGAAAACACAAGAGAGAATTGGAAAGGTATAATTAGGAGAAAGAGGTGTGTTGAAGATGAAGACGATGAAATGAGGAAGTTTAATCCAAGAGATCCAAATTTTTTGCCTTTGGTTCCTGAAAAAGAAAAGGAAAAGGTTGATTTGAGACATCAAATGATGGATGAGAGAAAGAATGCAGAGGATTGGATGGTTGATTGTGCACTAAGACAAGTTGTTAACAAGCTTGCTCCTGCTAGGAAGAAGAAGGTTGCATTGCTAGTTGAAGCATTTGAAACTGTTATACCTAAATGTGAATCTCATTTGAGAAACAAATCAGGGTTTGCTCATTCTAGACACATTCAAGCTTGCAGCTGA 2058 0.361 MVQRKVQNKLSINIQHVKSEKFLANMKISSSSSHQNQDGKTKVSDMKKKMKKSKLVKISDLETLQLQQSTPPSSVSRRTTTQDCSPNYMKPTSSSQSKKELFHVGLRKTQSCSVIENLDRKFSSESKAICKKPSLSLVRTLTKTTSFKGCRNFPRKSTRATCSSTLKDAKFPSYLKLNPGGTELEGSSVMRVCSYSYCSLNGHHHHNYGDLPPLKTFMSSRRRVLKRVKLEALSPRSRRLKVVGEVEKKGCDVEHNVFDEKPEHDEIGMDFFIEIYADEKKDAESTGEEEIGKTDFLEDVVDHEGIIKSKIEDDGIEADFLKKVEDQEKNEVADEDQQTSWSHEEMSMEGADNNMDDSDSEAGDMECEEEQFYGFGHEHEADSSVYTDEENDSKSESSSQSSHDVSVIWLDDILSSYYDDIILVDETIKEAKSEEKIYLEEQPQDDKSGSNETQEIGYPCSDVGCDQSSLADEIFDYLINAEENVDETSQENKDDNINKVKIQIQPSPSGFELCSLRPTDQTLTADQAPHEEKSQIQLFDVVEEIIKDIQDQGKGNKRTSCRVDEEEEENTRENWKGIIRRKRCVEDEDDEMRKFNPRDPNFLPLVPEKEKEKVDLRHQMMDERKNAEDWMVDCALRQVVNKLAPARKKKVALLVEAFETVIPKCESHLRNKSGFAHSRHIQACS* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4668 685 MobiDBLite consensus disorder prediction 382 397 - -
Tpr3g4668 685 Pfam Plant calmodulin-binding domain 557 663 IPR012417 GO:0005516
Tpr3g4668 685 Coils Coil 478 498 - -
Tpr3g4668 685 MobiDBLite consensus disorder prediction 326 365 - -
Tpr3g4668 685 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 483 685 IPR044681 GO:0005516
Tpr3g4668 685 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 496 IPR044681 GO:0005516
Tpr3g4668 685 MobiDBLite consensus disorder prediction 351 365 - -
Tpr3g4668 685 SMART CaM_binding_2 551 663 IPR012417 GO:0005516
Tpr3g4668 685 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 496 - -
Tpr3g4668 685 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 483 685 - -
Tpr3g4668 685 MobiDBLite consensus disorder prediction 326 342 - -
Tpr3g4668 685 MobiDBLite consensus disorder prediction 60 96 - -
Tpr3g4668 685 MobiDBLite consensus disorder prediction 28 96 - -
Tpr3g4668 685 MobiDBLite consensus disorder prediction 382 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4668 Tpr-Chr3 51684498 51687930 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4668 558 685 Calmodulin-binding Proteins AT2G38800 51.163 9.29e-31 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4668 - - cam:101515669 717.227