Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4657 ATGCATAGTAAACATAAAAGCCAAAACAAACAAACCATGGGATCTATCTGTGAAGATATTCATGATATTCCAAAATTTTTACCTTTTGTAGCAGAGGATGATGATGATGCATGTCTCTCTGCTATGCTTCTTTGTTGTGGTCCAATGATTTATACTTCAGTATTGAAAGCTGCAATTGAACTCAACTTGTTTGAGATCATATCTAAGGCAAATCCACCATGTGTTTCAGCATCATATGTTGCTTCAAAACTATCAACAACACAACATCCTCAATTGCCTCGAAGACTCGATCGAATGTTGTGTTTACTTGCAAGTCACTCTCTTCTTGTTTGTTCTACAAGAACAAATGAAGAAGGTGGGAATGAAAGATTTTATGAAGTTTCATTGGCTGGTAAATACTTTGTTAAAGATGAGAAAAATGGTTCTGTTGCTTTGTTCTCATCATTTATGAATCACCAAAAGTTCATGGATGCATTCAACAATTTTAAGGAGGTACTATCAGACTGTGAAAATGGACTATACATGAATGTTCATGGAATGCCAGTTTATCAAGGCATACAGTCTGATCCAGCTTGGAATCATGTGTTTAACAAATCAATGGCTGATATTTGCACAATAGAAATGAAGAAAATATTAGAAAAATACAAAGGATTTGAAGGAATTTCAATGTTGGTTGATGTTGGAGGAGGAATTGGGCAAAGTTTGAATATGATCATCTCTAAGTATCCTTCTATAAAGGGCATTAATTTTGATTTGCCCCAAGTCATACAACATGCCCCAATTTATCCAGGAATTGAGCATGTTGAAGGAGACATGTTTAAGAGTGTCCCAAAAGCTGATGCCATAATATTAAAGGCAATATTACACAATTGGTCTGATGAAAATTGTTTGAAAGTTCTAAGTAAGTGTTACAATGCTTTGCCACAACATGGTAAATTAATTGTTGTGGAATTCATAATGCCTCAAGAAATTCAGCATACAAAAGTAGATAAGTTGATTACTAGCTTTGACAACCTCATGTTTCTGGATAGTGGTGTTGAAAGAACAGAGAAAGAATTTGAAAAGTTATGCAAATGCTCTGGATTTTCTAGTTTTCATGTTGCTTGTCTTGCCTTCTCTGCTCTAGGAGTGATGGAATTTCACAAATAA 1149 0.3464 MHSKHKSQNKQTMGSICEDIHDIPKFLPFVAEDDDDACLSAMLLCCGPMIYTSVLKAAIELNLFEIISKANPPCVSASYVASKLSTTQHPQLPRRLDRMLCLLASHSLLVCSTRTNEEGGNERFYEVSLAGKYFVKDEKNGSVALFSSFMNHQKFMDAFNNFKEVLSDCENGLYMNVHGMPVYQGIQSDPAWNHVFNKSMADICTIEMKKILEKYKGFEGISMLVDVGGGIGQSLNMIISKYPSIKGINFDLPQVIQHAPIYPGIEHVEGDMFKSVPKADAIILKAILHNWSDENCLKVLSKCYNALPQHGKLIVVEFIMPQEIQHTKVDKLITSFDNLMFLDSGVERTEKEFEKLCKCSGFSSFHVACLAFSALGVMEFHK* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4657 382 Pfam Dimerisation domain 54 104 IPR012967 GO:0046983
Tpr3g4657 382 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 13 382 - -
Tpr3g4657 382 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 43 382 IPR016461 GO:0008168
Tpr3g4657 382 PIRSF O-mtase 28 382 IPR016461 GO:0008168
Tpr3g4657 382 Pfam O-methyltransferase domain 162 363 IPR001077 GO:0008171
Tpr3g4657 382 SUPERFAMILY "Winged helix" DNA-binding domain 33 138 IPR036390 -
Tpr3g4657 382 PANTHER O-METHYLTRANSFERASE 13 382 IPR016461 GO:0008168
Tpr3g4657 382 Gene3D - 50 211 IPR036388 -
Tpr3g4657 382 Gene3D Vaccinia Virus protein VP39 193 370 IPR029063 -
Tpr3g4657 382 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 142 378 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4657 Tpr-Chr3 51607867 51611631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4657 34 373 Monolignol Biosynthesis Gene Families AT5G54160 47.674 4.04e-98 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4657 - - cam:101492092 633.254