Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4649 ATGGCAGAGCTGATTGCTGGAGCATTTCTTTCTTCTCTCTTTCAAGTCACTCTTGAGAGGTTTTCCACAAGTGATTTCAAAGACCTCTTCAATAAAGGGTTGGTTGAAAAACTTGAAATCACACTGAATTCTATCAATCAATTGTTGGATGATGCAGAGACAAAACAATACCAAAATCAAAACGTGAAGAAATGGCTTGATCATCTAAAACATGAGGTATATGAAGTAGATCAATTATTGGATGAGATTGCTACAAATGCAAAGCAAAAGATCAAGGTGAAACACTTCGTTTCAACTTTGACTAATCGATTTGAGTCAAGGATAAAAGATTTGCTAGACAAGCTAAAATATCTTGCGGAGCAAAATGATGTGTTGGGATTGACACAAAGAAGTTGCATTAGTATTGAAAGTGCATTTAGCTTGAAATCCTCAAAAATATCACCAACTGCTTCATTAGTGGATGAATCTTGCATTTATGGTAGAGATCATGATAAAAATAAAATTATCAACTATTTGCTTTCTGACAATGATAGTGGCAAACGAGTATCGATAATCAGCATAGTGGGTTTGGGTGGGATGGGCAAGACCACTCTAGCTCAGCTTGTCTACAATGACGAGAGGATGAAGAAGCGGTTTGAACTTAAAGCTTGGGTTCATGTTGCGGAATCTTTTGATGTTGTTGGACTCACCAAAACAATTCTTAGGTCGTTCCATTCTTCTGCTGATGGTGAAGACTTGGATCCACTTAAATGTCAACTACAACAGACACTGACAGGTAAGAAATTTTTGCTTGTTCTAGATGATGTGTGGAATGCAAATGAGGAATGGTGGGAGCAGTTACTACTTCCTTTTTACCATGGATCTCCGGGAAGTAAGATTATTGTGACTACACGCGACAGGCATATTGCATTAGTTGTGAAATCCGACCATCAACATCATTTAAAGCAATTGGCGGAGAGTGACTGTTGGAATTTATTTGTGAAACATGCTTTTCGAGGAAGGAATGTTTTTGAATATCCAAATCTTGAATCAACCGGAAAGAAGGTTGTAGACAAGTGTGGAGGGTCGCCTTTAGCTGTGAAAACATTGGGAAATCTCTTGCAAAGAAAATTTTCTCAAGGCGAATGGTTTAAGATATTGGAGACTGATATGTGGCATGTATCGAAAGGTGATGATGAAATTAATCCGGTATTGAGATTGAGTTACCATAATCTCCCTTCCCATCTAAAGCGTTGTTTTGCCTATTGTTCCATATTTCCCAAGGGTTATGAATTTCAAAAAGATGAATTGGTCAAGCTTTGGATGGCAGAAGGTTTGTTGAAATGTTGCGGAAGAGACAAAAGTGAAGAAGAGTTGGGTAATGAATTCTTGGATGATCTAGAGTCCATTTCATTTTTCCAGCAATCAGTATATTCCCATAAGATTATAGCCATGCATGATCTTGTCAATGATTTGGCAAAATCAGAGTCGCGAGAGTTTTGCTTACAAATTGAGGGTGATAAGGTGCAAGATATATCTGAAAGAACGCGTCACATTTGGTGCTCTCTTGATTTGAAAGATGGTGCTAGAATATTAAAGCTTATTTGTAAGATTAAGGGATTACGAAGCCTGTTAGTACACGACCGAGTCTATGGTGAGGAGTACTTCACCATAAGCAAGAATGTGCAACGTGATCTATTTTCAAAACTGAAATATTTACGGATGTTGTCATTTCGTGGTTGTGAACTTACAGAGCTAGCATATGAGATAGGCAATTTAAAGCTTTTGCGCTATCTAGACTTGACAAGCACAGAGATTAAAAGCTTGCCTAATTCCATTTGCAAGTTGTATAATTTACAGACACTGATATTGGAAAAGTGTTTTGAATTGACTGAACTCCCTTCAGATTTTTACAAGCTTGCTAGTTTATGTCATCTTAATCTTGAATGCATTTATATAAAGAAGATGCCAAAGCAGATTGGGAGGCTAAATCATCTTCAAACACTCAGTCATTTTGTCGTGGGAGAGAATAGTGGGTCCGATATTAAGGAGTTGGATAATCTCAATCATCTTCAAGGAAAGCTTACTATTTCAGGGTTGGAAAATGTCACTAATCCCGCAGATGCTGCAGGAGCAAATTTGAAAGATAAGAAACATCTGAAAGAATTGATCATGAATTATAGTGACGATTTCATTTTCAATAACAATGGAAGAGAATTGGATGTCTTGGAGGCTCTTCTACCAAATAGCAATTTGAAGAGGCTCACTATTGAATACTACAATGGCAACTGCTTTCCAAATTGGCTATGTGGTTTTCATTTACCCAACTTAGTGTCTCTTAAACTGCAAAGTTGTGGATTATGTTCTCATTTGCCGCCACTTGGTCAACTTCCTTGTCTCAGGGAGCTTTCCATTTCACATTGTGATGGAATAAAGATCATTGGTGAAGAGTTTTACGACAATAATTCAACAATTTTTCCGTTCAAGTCCCTTGAAGTTTTGATATTTGATCGGATGTATTGTTTGGAGGAATGGTTATGTCTTGAAGGGTTTCCTGTGCTTAAAGAGCTTTCTATTATAAATTGTCCCGAATTGACAAGGGCCTTGCCTCAACACTTTCCTTCTTTACAAAAATTAAAGATAAGCAATTGCAACAAGTTGGAGGAATGGTTATGTCTTGAAGGATTTCCTTTCCTTAAAGAGCTTTCTATTATAAATTGTCCCGAATTGAAAAGGGCCATTCCTCAACACCTTCCTTTTTTACAAAAATTGAAGATACGTAATTGCAACAAGTTGGAGGAATGGTTATGTCTTGAAGGGCTTCCTTTGCTTAAAGAGATTTTTATAGAACATTGTCCTAAATTGAAAAGGCTCCTGCCTCAACACCTTCCTTCTTTACAAATATTAGAGATTTTTGATTGCAAAATGTTGGAGGTATCAATTCCCAAAGGTGACAGTATCATAGAGTTACATCTACATAGATGTGATAGAGTTTTGGTAAATGGATTGTCTACCAGCTTGAAAAAGTTTGTCCTTCGTGAAAATCGGTATACTGAGTTCTCCGTGGAGCAAAATCTACTCAAAAATACCATTCTTGAAGAGATGGAGTTTGATTTTAGAGGCTTCGTAAAATTTCCCTTTTTGGATTTGCGTTGCTATAATTCTCTTAGTAGACTTTGCATAAAAGGTTGGTGCTTGCCTTCTTTGCCCTTTGCACCACACTTATTCACCAATCTTCATTCTCTCTCGTTGTTCGATTTCCCACAGTTGGAATCATTTCCAAGTGGAGGGTTGCCTTCTAACTTAAGCATCCTTGGAATATTCAACTGCCCTAAACTGATTGCTTCGAGAGAGGAGTGGGGTTTGTTCCAACTCAATTCTTTGAAAGTTTTCGTTGTTAGTGATGACTTTGAAAACATAGAGTCTTTCCCAGAGGAGAATCTGTTGCCACCAAATCTGAATTATCTTTATTTGATAAAATGTTCAAAGCTAAGAATAATGAATTACAAGGGTTTTCTTCACCTCAAATCTCTCGAGGATCTATGTATTCGCAACTGCCCTAGTTTTGAGCGCTTGCCAGAGGAGGGTCTACGCAACTCCCTTTCTAGTTTGTGGATTAGTGATTGTCCATTAATTAAGGAGCAGTACAAAAAGGAAGAAGGAGAGCGTTGGCATACAATTCGTCACATCCCTTCGGTGACCATAACTTGA 3690 0.3762 MAELIAGAFLSSLFQVTLERFSTSDFKDLFNKGLVEKLEITLNSINQLLDDAETKQYQNQNVKKWLDHLKHEVYEVDQLLDEIATNAKQKIKVKHFVSTLTNRFESRIKDLLDKLKYLAEQNDVLGLTQRSCISIESAFSLKSSKISPTASLVDESCIYGRDHDKNKIINYLLSDNDSGKRVSIISIVGLGGMGKTTLAQLVYNDERMKKRFELKAWVHVAESFDVVGLTKTILRSFHSSADGEDLDPLKCQLQQTLTGKKFLLVLDDVWNANEEWWEQLLLPFYHGSPGSKIIVTTRDRHIALVVKSDHQHHLKQLAESDCWNLFVKHAFRGRNVFEYPNLESTGKKVVDKCGGSPLAVKTLGNLLQRKFSQGEWFKILETDMWHVSKGDDEINPVLRLSYHNLPSHLKRCFAYCSIFPKGYEFQKDELVKLWMAEGLLKCCGRDKSEEELGNEFLDDLESISFFQQSVYSHKIIAMHDLVNDLAKSESREFCLQIEGDKVQDISERTRHIWCSLDLKDGARILKLICKIKGLRSLLVHDRVYGEEYFTISKNVQRDLFSKLKYLRMLSFRGCELTELAYEIGNLKLLRYLDLTSTEIKSLPNSICKLYNLQTLILEKCFELTELPSDFYKLASLCHLNLECIYIKKMPKQIGRLNHLQTLSHFVVGENSGSDIKELDNLNHLQGKLTISGLENVTNPADAAGANLKDKKHLKELIMNYSDDFIFNNNGRELDVLEALLPNSNLKRLTIEYYNGNCFPNWLCGFHLPNLVSLKLQSCGLCSHLPPLGQLPCLRELSISHCDGIKIIGEEFYDNNSTIFPFKSLEVLIFDRMYCLEEWLCLEGFPVLKELSIINCPELTRALPQHFPSLQKLKISNCNKLEEWLCLEGFPFLKELSIINCPELKRAIPQHLPFLQKLKIRNCNKLEEWLCLEGLPLLKEIFIEHCPKLKRLLPQHLPSLQILEIFDCKMLEVSIPKGDSIIELHLHRCDRVLVNGLSTSLKKFVLRENRYTEFSVEQNLLKNTILEEMEFDFRGFVKFPFLDLRCYNSLSRLCIKGWCLPSLPFAPHLFTNLHSLSLFDFPQLESFPSGGLPSNLSILGIFNCPKLIASREEWGLFQLNSLKVFVVSDDFENIESFPEENLLPPNLNYLYLIKCSKLRIMNYKGFLHLKSLEDLCIRNCPSFERLPEEGLRNSLSSLWISDCPLIKEQYKKEEGERWHTIRHIPSVTIT* 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4649 1229 Gene3D - 402 490 IPR036388 -
Tpr3g4649 1229 Pfam Rx N-terminal domain 10 91 IPR041118 -
Tpr3g4649 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 416 IPR027417 -
Tpr3g4649 1229 Gene3D - 142 312 IPR027417 -
Tpr3g4649 1229 PANTHER OS05G0414200 PROTEIN 20 930 - -
Tpr3g4649 1229 PANTHER DISEASE RESISTANCE PROTEIN RP 20 930 IPR044974 GO:0006952
Tpr3g4649 1229 SUPERFAMILY L domain-like 954 1207 - -
Tpr3g4649 1229 PRINTS Disease resistance protein signature 184 199 - -
Tpr3g4649 1229 PRINTS Disease resistance protein signature 256 270 - -
Tpr3g4649 1229 PRINTS Disease resistance protein signature 353 367 - -
Tpr3g4649 1229 PRINTS Disease resistance protein signature 864 880 - -
Tpr3g4649 1229 Pfam NB-ARC domain 162 402 IPR002182 GO:0043531
Tpr3g4649 1229 Coils Coil 35 55 - -
Tpr3g4649 1229 Gene3D - 316 401 IPR042197 -
Tpr3g4649 1229 Gene3D Ribonuclease Inhibitor 988 1226 IPR032675 -
Tpr3g4649 1229 Gene3D Ribonuclease Inhibitor 523 883 IPR032675 -
Tpr3g4649 1229 Gene3D - 29 123 - -
Tpr3g4649 1229 Gene3D Ribonuclease Inhibitor 905 987 IPR032675 -
Tpr3g4649 1229 SUPERFAMILY L domain-like 478 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4649 Tpr-Chr3 51545082 51564661 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4649 182 370 WRKY Transcription Factor Family AT5G45050 26.178 1.48e-06 50.8