Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4648 ATGGCAGAGTTGGTTGCTGGGGCATTTCTTTCTTCGTCCGTTCAAGTGATTTTGGAGAAGTTGGCTTCATTCAGAGACTACTTTGGTGGTAATAATTTTGATGAGCTGGTGGAAGAATTTGAAATTAAACTCAATTCTATCAAACATGTCTTGGAAAGAGCAGAGATAAAGCAGTACCAAAGCACACGTGTGAAGACGTGGTTTGATAAACTTAAACATGCTGTTTATGAGGCAGACCAAACTTTGGATGAGATTGCTACCGATGCAATGTTGAAAAAGATGAAAGCCGAATCTGAACCTTTTACCACTAAAGTATCCGTCATGTGGTCATCTATAACTTCAAATCCATTTGAATCTAGGATCAATGAACAAATGGACAAACTAGAATCACTTTTGAATGAAACAAAATGGTTGGGATTGGAAGATGGTCCTTGTGCTAGTAAAGAAGGCTTAGTCAGTTGGAAACCTTCAAAAACATTGTCAACTACAGCTCTTGTCGATGAGTCAACCATATATGTTAGAGAAGTTCAGAAGGAAGAACTTATCAAACTTTTACTTGAAGGCAATGACAGTGGCAACAAAGTTCCAATAATCAGCATAGTTGGTTTAGGAGGGATGGGGAAAACCACCCTTGCTAAGCTTGTGTGCAATGACAAGAAGATAAAGGAGCATTTTCAACTTCAAGCGTGGGTCTATGTTTCAGAATCTTTTGATGTTGTTGGACTCACCAAAGCAATTCTCGAATCATTTAAGTTTCCAGCAAATGGTGAAAACTTGAGTCTACTTCAACAACAACTTCAGCACGAACTAACGGGAAAGAAATACTTGCTTGTTTTAGATGATATCTGGAACGTGAATGCTACCTGTTGGGAGGACTTGATACTTCCTTTTAATCATGGATCTTCTGGAAGTAAGATTATTGTGACAACACGTGACAAGGGGGTCGCAAATGTCCTGAATTCAAAGTTATTTGATTTACAACAATTGGACAAAAGTGATTGTTGGAGATTATTTGAGACACTTGCATTTCATGGCAGGAATGTGCGCGATACAAATCTTGAATCAATTGGCAAGAAAATAGTGGAAAAGTGTGGAGGGTTGCCTTTAGCTGTAAAAACACTGGGCCAACTCTTGCGAAGAAAATTCTCTGTATCTGAATGGACTAAGATATTGGAGACTGATATGTGGCGATTATCAGATGAGGACAACAACATTAACCCAGTGCTGAGATTGAGTTATCATAATCTCCCTTCCAATCATCATATGCGTTGTTTTGCTTATTGTTCTATAATTCCCAAAGGTTATGTGTTTGGCAAAGGTGAATTAATCGGTTATTGGATGGCAGAAGGTTTGCTGAAGTGTTGCGAAGCATACAACAGTGAAGAAGAGTTTGGTAGTGAAATTTTCACCGATCTGGAGTCAATTTCATTTTTCCAGAAATCATTGTATGATGTTGAATTTGTCATGCATGATCTTGTCAATGATTTAGCAAAATCAGTGTCAGGAGAATTTTGTAAGAAAATAGATAGTGCTTGGGTGGAAGGTAACCTTAAAAGGACACGTCACATTTGGTGGTCTCTTGAATTAAATTGTGTTGATAAATTACTAGAGCCAATATGTGAAGTTAAGGGACTACGAAGTCTAATACTAAAAGGAGACTATGTTATGTTGATAAGCAACAATGTGCAACGTGATCTGTTTTCAAGACTGACATGTTTGCGGATGTTATCATTTAGAGATTGTGGTCTGTCAGAGCTAGTTGATGAGATAGGCAATTTAAAACTTTTGCGATTCCTAGAGCTTGATGAGGAAAAGATTACAAGCCTACCTGATACCATATGTGCTTTGTACAATTTGCAAACCCTCTTGTTGGAAAGGTGTGATGAATTGACAGAGCTCCCTTCAAATTTTTCCAAGCTCATCAATTTACGTCATCTTGAACTTCCTTTTGGTTTAAAGAAGATGCCAAAGAATATAGGAAAGCTAAACAATCTTCACACATTGAATTATTTTATTGTGGAAGAGCAGAACGGATCTGGTATTAAAGAATTGGAAAATATGAACAATCTTCATGGAACAATTAAATTTACAGGCTTGGGTAATGTCATTGATCATGTAGATGCTGCAAAAGCCAATTTGAAAGATAAGAAGTATTTAGAAGAATTACATATGGTGTTTGATGGCGGAAGAGAAGAAATGGATGACTCAATAGTTGAAAGCACTGTGTCTGTGTTGGAGGCTCTTGAACCAAATAGCAACTTGAAGAAACTCAACATTGAAAACTACAATGGCAAAAACTTTCCAAATTGGCTAAGGGATTGTCATTTACCCAACTTAGTATCTCTTAAATTGGAGAGATGTAGATTATGTTCGCAGTTGCCGCCATTTGGTCAGCTTCCTTGTCTCAAGTATCTTTCCATTTCACATTGTGATGGAATAAAGATCATCGGCGAAGAGTTTTACGACAGTAATTCAACAAGTCTTTCGTTCAGGTCCCTTGAAGTTTTGGAATTTTATGGGATGGACAATTGGGAGGAATGGCTATGTCTTGAAGGTTCTCCTTTGCTTAAAGAGCTTTATATAAGAGAATGTCCAGAATTGAAAAGGATTTCACCTCAGCACTTTCCTTCTTTACAAAAATTGGTGATACATGAATGCAACAAGCTGGAGGAATGGCTATGTCTTGAAGGATCTCCTTTGCTTAAAGAGCTTTTTATAAGTAAATGTCCAGAATTGAAAAGGATTCCGCCTCAACACCTTCCTTCTTTACAAAAATTGAAGATAAGTGATTGCAACAAGTTGGAGGAATGTTTATGTCTTGAAGGATCTCCTTTGCTTAAAGAGCTTTTTATAAGTAAATGTCCAGAATTGAAAAGGATTCCGCCTCAACACTTTCCTTCTTTACAACAATTGTACATTTATGATTGCAACAAGTTGGAGGAATGTTTATGTCTTGAAGGATCTCCTTTACTTGAAAATGTTTCTTTAAAAAATTGTTCCAAATTGAAAAGGGTCCCACTGCCTCAACACTTTCCTTCTTTACAAACATTGAAGATTTGTGATTGTGAAATGCTGGAAGCATCAATTCCCAAGGGTGATAGTATGATAGAGTTGGTTCTACAGAGATGTCATCGGATTTTGGTAAATGGTGGATTGTCGTCTAGGTTGAAAGAGTTTGTCCTTGAAGGAAATCGGTATACCGAGTTCTCCTATGAGCAAAATTTAGTAAACTGTACCATTCTTGAAGAGTTGGAGTTTGATTTCAGAGGCTTTGTAAAACGTCCCTCTTTAGATCTGCGTTGCTATAATTCTCTTCGTAAACTTGAAATAACAGGATGTGACTCCTCCTTCTTGCCTTTTTCACTACATCTGTTCACCAATCTTCAATTTCTCACGTTGTACGATTGTCCACAGCTGGAATCATTTCCAATTGGAGGTTTGCCTTCCAACTTGAGTTCACTTTCAATATCCAATTGCCCAAAACTGATTGGTTCGAGAGAGGAGTGGGGTTTGTTCCAACTCAATTCTTTGAATAAATTCACAATTACCGATGAGTTTGAAAATGTGGAGTCCTTCCCAGAGGAGAATCTGCTGCCACCAACTCTTACGTGGCTTCTATTGATGAATTGTTCAAAGCTAAGAATAATGAACAACAAGGGTTTTCTCCACCTCAATTCTCTCGAATATCTAACTATTTACAACTGCCCTAGTCTTGAGAGCTTGCCAGAGGAGGGTCTTCTCAACCTTAATGTGTTGTTCATTGAGAAATGTCCATTAATTTGGGAGAAGTACAAAAAGGAGGGAGGAGAGCGTTGGCATACAATTCGTCACATCCCGAATGTGTGGATTGACTCCATTGAGCAGCACAGATGA 3873 0.3785 MAELVAGAFLSSSVQVILEKLASFRDYFGGNNFDELVEEFEIKLNSIKHVLERAEIKQYQSTRVKTWFDKLKHAVYEADQTLDEIATDAMLKKMKAESEPFTTKVSVMWSSITSNPFESRINEQMDKLESLLNETKWLGLEDGPCASKEGLVSWKPSKTLSTTALVDESTIYVREVQKEELIKLLLEGNDSGNKVPIISIVGLGGMGKTTLAKLVCNDKKIKEHFQLQAWVYVSESFDVVGLTKAILESFKFPANGENLSLLQQQLQHELTGKKYLLVLDDIWNVNATCWEDLILPFNHGSSGSKIIVTTRDKGVANVLNSKLFDLQQLDKSDCWRLFETLAFHGRNVRDTNLESIGKKIVEKCGGLPLAVKTLGQLLRRKFSVSEWTKILETDMWRLSDEDNNINPVLRLSYHNLPSNHHMRCFAYCSIIPKGYVFGKGELIGYWMAEGLLKCCEAYNSEEEFGSEIFTDLESISFFQKSLYDVEFVMHDLVNDLAKSVSGEFCKKIDSAWVEGNLKRTRHIWWSLELNCVDKLLEPICEVKGLRSLILKGDYVMLISNNVQRDLFSRLTCLRMLSFRDCGLSELVDEIGNLKLLRFLELDEEKITSLPDTICALYNLQTLLLERCDELTELPSNFSKLINLRHLELPFGLKKMPKNIGKLNNLHTLNYFIVEEQNGSGIKELENMNNLHGTIKFTGLGNVIDHVDAAKANLKDKKYLEELHMVFDGGREEMDDSIVESTVSVLEALEPNSNLKKLNIENYNGKNFPNWLRDCHLPNLVSLKLERCRLCSQLPPFGQLPCLKYLSISHCDGIKIIGEEFYDSNSTSLSFRSLEVLEFYGMDNWEEWLCLEGSPLLKELYIRECPELKRISPQHFPSLQKLVIHECNKLEEWLCLEGSPLLKELFISKCPELKRIPPQHLPSLQKLKISDCNKLEECLCLEGSPLLKELFISKCPELKRIPPQHFPSLQQLYIYDCNKLEECLCLEGSPLLENVSLKNCSKLKRVPLPQHFPSLQTLKICDCEMLEASIPKGDSMIELVLQRCHRILVNGGLSSRLKEFVLEGNRYTEFSYEQNLVNCTILEELEFDFRGFVKRPSLDLRCYNSLRKLEITGCDSSFLPFSLHLFTNLQFLTLYDCPQLESFPIGGLPSNLSSLSISNCPKLIGSREEWGLFQLNSLNKFTITDEFENVESFPEENLLPPTLTWLLLMNCSKLRIMNNKGFLHLNSLEYLTIYNCPSLESLPEEGLLNLNVLFIEKCPLIWEKYKKEGGERWHTIRHIPNVWIDSIEQHR* 1291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4648 1290 Gene3D Ribonuclease Inhibitor 918 1044 IPR032675 -
Tpr3g4648 1290 Gene3D Ribonuclease Inhibitor 1168 1264 IPR032675 -
Tpr3g4648 1290 Coils Coil 37 57 - -
Tpr3g4648 1290 PANTHER OS05G0414200 PROTEIN 26 938 - -
Tpr3g4648 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 428 IPR027417 -
Tpr3g4648 1290 Gene3D Ribonuclease Inhibitor 526 917 IPR032675 -
Tpr3g4648 1290 PRINTS Disease resistance protein signature 197 212 - -
Tpr3g4648 1290 PRINTS Disease resistance protein signature 269 283 - -
Tpr3g4648 1290 PRINTS Disease resistance protein signature 364 378 - -
Tpr3g4648 1290 PRINTS Disease resistance protein signature 918 934 - -
Tpr3g4648 1290 Pfam NB-ARC domain 175 414 IPR002182 GO:0043531
Tpr3g4648 1290 Gene3D - 154 324 IPR027417 -
Tpr3g4648 1290 SUPERFAMILY L domain-like 1050 1260 - -
Tpr3g4648 1290 Pfam Rx N-terminal domain 9 97 IPR041118 -
Tpr3g4648 1290 Gene3D - 413 500 IPR036388 -
Tpr3g4648 1290 Gene3D - 328 412 IPR042197 -
Tpr3g4648 1290 SUPERFAMILY L domain-like 936 1035 - -
Tpr3g4648 1290 Gene3D - 13 121 - -
Tpr3g4648 1290 PANTHER DISEASE RESISTANCE PROTEIN RP 26 938 IPR044974 GO:0006952
Tpr3g4648 1290 Gene3D Ribonuclease Inhibitor 1045 1164 IPR032675 -
Tpr3g4648 1290 SUPERFAMILY L domain-like 488 938 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4648 Tpr-Chr3 51504042 51539419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4648 185 381 WRKY Transcription Factor Family AT5G45050 26.471 7.62e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4648 - - mtr:MTR_3g022600 1546.18