Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4643 ATGGCAGAGTTGGTTGCTGGGGCATTTCTTTCTTCTTCCTTTCAAGTCATTTTTGATAAGTTGGCTTCAGTTGATATCAGATACTACTTTGGTGGTAATAAACTTGATGATCTCGTCAAAGAACTTGATATTAAACTCAATTCTATCAACCATGTCTTGGAAGAAGCAGAGATAAAGCAGTACCAAAACACACATGTGAAGAAATGGCTTGATGAACTTAAACATGTTCTTTATGATGCAGACCAAATTTTGGATGAGATTGCTACTGATGCAATGCTGAATAAGATGAATGCTGAATCTGAACCTGTTACCAATTTTATATCTGGCATGTGGTCATCTTTAACTCCAAATCCATTTGAATCTAGGATCAATCAAGTACTGGAGAATCTCCAATTACTTGCAGATCAAAAGAAAGATTTGGGATTGGAAGATGGTCCTTGTGCTAGTAAAGAAGGCTTAGTCAGTTGGAAACCTTCAAAAACATTGTCAACTACAGCTCTTGTCGATGAGTCAACCATATATGGTAGAGAAGTTCAGAAGGAAGAACTTATCAAACTTTTACTTGAAGGCAATGACAGTGGCAACAAAGTTCCAATAATCAGCATAGTTGGTTTAGGAGGGATGGGGAAAACCACCCTTGCTAAGCTTGTGTGCAATGACAAGAAGATAAAGGAGCATTTTCAACTTCAAGCATGGGTCTATGTTTCAGAATCTTTTGATGTTGTTGGACTCACCAAAGCAATTCTCGAATCATTTAAGTTTTCTGCAAATGGTGAAAACTTGAGTCTACTTCATCAACAACTTCAGCAAGAACTAACGGGAAAGAAATTCTTGATTGTTTTAGATGATATCTGGAACGTGAATGCTGCCTGTTGGGAGGACTTACTACTTCCGTTTAATCATGGATCTTCTGGAAGTAAGATTATCGTGACAACACGTGAAAAGAAGGTAGGGAATGTCCTGAATTCGAAGTTATTTGATTTACAACAATTGGACAAAAGCGATTGTTGGAGATTATTTGAGACACATGCATTTCATGGCAGGAATAAGTGCGAAAATCCAGAACTTGAATCAATTGGCAAGAAAATAGTCAACAAGTGTGGTGGGTTGCCTTTAGCTGTAAAAACATTGGGCCAACTCTTGCGAAGAAAATTCTCTGTACCTGAATGGACTAAGATATTGGAGACTGATATGTGGCGATTACCAGACGGGGTCAACATTAACCCAGTGCTGAGATTGAGTTATCATAATCTCCCTTCCAATCATAAGCGTTGTTTTGCTTATTGTTCTATAATTCCCAAAGGTTATGAGTTTGGCAAAGGTGAATTAATCGGTTATTGGATGGCAGAAGGTTTGCTGAAGTGTTGCGAAGCATACAACAGTGAAGAAGAGTTTGGTAGTGAAATTTTCAGCGATCTTGAGTCAATTTCATTTTTGCAACAATCACATCATACAAAATCTTTTACACAAGAGCACTACTTTTTCATGCATGATCTTGTCAATGATTTAGCAAAATCAGTGTCAGGAGAATTTTGTAAGAAAATAGATAGTGCTTGGGTGGAAGGTAACCTTAAATGTACACGTCACATTTGGTGCTCTCTTGAATTAAATTGTGTTGATAAATTACTAGAGCAAATATGTGAAGTTAAGGGGCTACGTAGTCTAATACTAAAAGGAGACAATGTTATGTTGATAAGCAACAATGTGCAACGTGATCTGTTTTCAAGACTAACATGTTTGCGGATGTTATCATTTAGAGGTTATCATGGTTGTGGTCTGTCAGAGCTAGTTGATGAGATAGGCAATTTAAAACTTTTACGTTATCTAGACCTTTCTGACACACGGATTAAAAGCTTACCTGATACCATTTGTATGTTGTATAATTTGCAAACACTCTTGTTGCAATGGTGTGAGTTGACAGAGCTCCCTTCAAATTTTTCCAAGCTCATCAATTTACGTCATCTTGAACTTCCTTTTGGTTTTAAGAAGATGCCAAAGAATATAGGAAAGCTAAACAATCTTCACACATTGAATTATTTTATAGTGGAAGAGCAGAACGGATCTGGTATTAAAGAATTAGCAAATATGAACAATCTTCATGGAACAATTAAAATTACAGGCTTGGGTAATGTTATTGATCATGTAGATGCTGCAAAAGCCAATTTGAAAGATAAGAAGTATTTAGAAGAATTATATATGGTGTTTGATGGCGGAAGAGAAGAAATGGATGACTCAATAGTTGAAAGCACTGTGTCTGTGTTGGAGGCTCTTGAACCAAATAGTAACTTGAAGAAACTCAACATTGAAAACTACAATGGCGACAACTTTCCAAATTGGCTAAGGGATTGTCATTTACCCAACTTAGTATCTCTTAAACTGAAGAGATGTAGATTATGTTCACAGTTGCCGCCATTTGGTCAGCTTCCTTGTCTCAAGTATCGTTCCATTTCACATTGTGATGGAATAAAGATCATCGGCGAAGAGTTTTACGACAGTAATTCAACAAGTCTTTCGTTCAGGTCCCTTGAAGTTTTGGAATTTTATGGGATGGACAATTGGGAGGAATTGTCATGTCTTGAAGGGTTTCCTTTGCTTAAAGAGCTTTATATAAGAGAATGTCCAGAATTGAAAAGGATTCCGCCTCAACACCTTCCTTCTTTACAAAAATTTGAGATAAGAGGTTGCAACAAGTTGGAGGAATGTTTATGTCTTGAAGGATCTCCTTTGCTTAAAGAGCTTTATATAAGAGGATGTCCAGATTTGAAAAGGATTCCGCCTCAACACCTTCCTTCTTTACAAAAATTTGAGATAAGAGGTTGCAACAAGTTGGAGGAATGGCTATGTCTTGAAGGATCTCCTTTGCTTAAAGAGGTTTCTATAGAAAAATGTTCCAAATTGAAAAGGGCCCCACTGCCTCAACACCTTCCTTCTTTACAAAAATTGATAATTTGTGATTGTGAAATGTTGGAAGCATCAATTCCTAAGGGTGATAGTATGATAGAGTTAGTTCTAGATAGATGTGATCGGATTTTGGTAAAGGAATTGCCGACCAGCTTGAAAAAGTTTGTCCTTTACAGAAATCGGTACGTCGAGTTCTCCGATGAGCAAAATTTAGTAAAGTGTACCGTTCTTGAACGGTTGGCGATTGATTTAAGAGGCTTTGTAAAACATCCCTCTTTAGATCTGCTTTGCTATAATTCTCTTCGTAACCTTGAAATAAAAGAGTGTCACTCCTCCTCCTTGCCTTTTTCACTACATCTGTTCACCAATCTTCAATCTCTCTATTTGTACGATTGCCCACAGCTGGAATCATTTCCAAGTGGAGGTTTGCCTTCCAACTTGATACAACTTAACATAGAGAATTGCCCAAAACTGATTGGTTCGAGAGAGGAGTGGGGTTTGTTCCAACTCAATTCTTTGAATGTTTTCAGTGTTAAGGATGCTGAGTTTGAAAACGTGGAGTCCTTCCCAGAGGAGAATCTGCTGCCACCAACTCTTGTAAGGCTTTATCTGAGAAATTGTTCAAAGCTAAGAATAATGAACAACAAGGGTTTTCTCCACCTCAATTCTCTCATAGAACTATCTATTAGAAACTGCCCTAGTCTTGAGAGCTTGCCATAG 3621 0.3748 MAELVAGAFLSSSFQVIFDKLASVDIRYYFGGNKLDDLVKELDIKLNSINHVLEEAEIKQYQNTHVKKWLDELKHVLYDADQILDEIATDAMLNKMNAESEPVTNFISGMWSSLTPNPFESRINQVLENLQLLADQKKDLGLEDGPCASKEGLVSWKPSKTLSTTALVDESTIYGREVQKEELIKLLLEGNDSGNKVPIISIVGLGGMGKTTLAKLVCNDKKIKEHFQLQAWVYVSESFDVVGLTKAILESFKFSANGENLSLLHQQLQQELTGKKFLIVLDDIWNVNAACWEDLLLPFNHGSSGSKIIVTTREKKVGNVLNSKLFDLQQLDKSDCWRLFETHAFHGRNKCENPELESIGKKIVNKCGGLPLAVKTLGQLLRRKFSVPEWTKILETDMWRLPDGVNINPVLRLSYHNLPSNHKRCFAYCSIIPKGYEFGKGELIGYWMAEGLLKCCEAYNSEEEFGSEIFSDLESISFLQQSHHTKSFTQEHYFFMHDLVNDLAKSVSGEFCKKIDSAWVEGNLKCTRHIWCSLELNCVDKLLEQICEVKGLRSLILKGDNVMLISNNVQRDLFSRLTCLRMLSFRGYHGCGLSELVDEIGNLKLLRYLDLSDTRIKSLPDTICMLYNLQTLLLQWCELTELPSNFSKLINLRHLELPFGFKKMPKNIGKLNNLHTLNYFIVEEQNGSGIKELANMNNLHGTIKITGLGNVIDHVDAAKANLKDKKYLEELYMVFDGGREEMDDSIVESTVSVLEALEPNSNLKKLNIENYNGDNFPNWLRDCHLPNLVSLKLKRCRLCSQLPPFGQLPCLKYRSISHCDGIKIIGEEFYDSNSTSLSFRSLEVLEFYGMDNWEELSCLEGFPLLKELYIRECPELKRIPPQHLPSLQKFEIRGCNKLEECLCLEGSPLLKELYIRGCPDLKRIPPQHLPSLQKFEIRGCNKLEEWLCLEGSPLLKEVSIEKCSKLKRAPLPQHLPSLQKLIICDCEMLEASIPKGDSMIELVLDRCDRILVKELPTSLKKFVLYRNRYVEFSDEQNLVKCTVLERLAIDLRGFVKHPSLDLLCYNSLRNLEIKECHSSSLPFSLHLFTNLQSLYLYDCPQLESFPSGGLPSNLIQLNIENCPKLIGSREEWGLFQLNSLNVFSVKDAEFENVESFPEENLLPPTLVRLYLRNCSKLRIMNNKGFLHLNSLIELSIRNCPSLESLP* 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4643 1206 PANTHER OS05G0414200 PROTEIN 22 945 - -
Tpr3g4643 1206 Gene3D - 330 414 IPR042197 -
Tpr3g4643 1206 Gene3D - 14 118 - -
Tpr3g4643 1206 Pfam NB-ARC domain 177 395 IPR002182 GO:0043531
Tpr3g4643 1206 Gene3D Ribonuclease Inhibitor 946 1129 IPR032675 -
Tpr3g4643 1206 SUPERFAMILY L domain-like 953 1202 - -
Tpr3g4643 1206 ProSiteProfiles Leucine-rich repeat profile. 605 626 IPR001611 GO:0005515
Tpr3g4643 1206 PRINTS Disease resistance protein signature 199 214 - -
Tpr3g4643 1206 PRINTS Disease resistance protein signature 271 285 - -
Tpr3g4643 1206 PRINTS Disease resistance protein signature 367 381 - -
Tpr3g4643 1206 PRINTS Disease resistance protein signature 601 617 - -
Tpr3g4643 1206 PANTHER DISEASE RESISTANCE PROTEIN RP 22 945 IPR044974 GO:0006952
Tpr3g4643 1206 Coils Coil 39 59 - -
Tpr3g4643 1206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 429 IPR027417 -
Tpr3g4643 1206 Gene3D - 156 326 IPR027417 -
Tpr3g4643 1206 Gene3D Ribonuclease Inhibitor 1130 1206 IPR032675 -
Tpr3g4643 1206 Gene3D Ribonuclease Inhibitor 881 945 IPR032675 -
Tpr3g4643 1206 SUPERFAMILY L domain-like 496 960 - -
Tpr3g4643 1206 Gene3D - 415 507 IPR036388 -
Tpr3g4643 1206 Pfam Rx N-terminal domain 9 95 IPR041118 -
Tpr3g4643 1206 Gene3D Ribonuclease Inhibitor 523 857 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4643 Tpr-Chr3 51446586 51463671 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4643 187 507 WRKY Transcription Factor Family AT5G45050 23.780 2.42e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4643 - - mtr:MTR_3g022600 1573.53