Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4640 ATGGCAGCACAGCATTCTGTTGGTGGGGCATTTCTATCGTCTGTGTTTCAAGAGATTCACCGGAGGTTAGCTTTAACAAGATATTACAGAAACTACTACGATGAAGAGGTGGCGAAAAAGCTAGAAATCACACTGAGTTCTATCAATGAAGTTCTGGATGATGCAGAGACAAAGCAGTATCAAAACCCAGATGTGAAGAAATGGCTTGATGATCTCCAACATGAGGTATACGAATTAGAGCAACTACTGGATCTGATTTCTACTGATGCTCTGCAACGAAAGGGCACAGTACAACGCTTTGTTTCAGGTTTTATAAAACGATCTCCATATAAAGTATTGCTACAGAGGCTACAGTTTCTTGCATGGCAAAAGGTTATATTAGGACTTCAAGAAGAAGCAACTCGTGATAATCATGTATGGGAGAATCTATCAACTACTAGATCTTTGGTGGATGAATCTTCCATATATGGTAGATATCATGAGAAAGAGGAAATAATCCATTTTTTACTTGCAAATAGTGACAATGACAACCAGGTATCCATAATAAGTATATTGGGTCTGGGTGGGATGGGTAAGACAACCCTTGCCCAGCTAGTTTTCAATGACCACAGGATGACGGAGCAATTCGAAATTAAAGCTTGGGCCAATGTTTCGGAATCTTTTGATCTTGTTGGTCTCACCCAATCAATTCTCTGGTCCTTTCAATCATTTCAATCCCATAATGAAGACTTGGAAATACTCCAACATCAATTGCAACAGTGTCTAACGGGCAAGAGATATTTGCTTGTTCTAGATGATATTTGGAGCAAAGATGGGAATATGTGGGAGCATTTACTACTTCCTTTTAGCCGTGGATCTTCTCAAGGTAAGGTCATCGTCACAACGCGTGATAAGGAAGTAGCATCAATCATGGGATCCACGCGCCTACTTCATTTAAAGCAATTGGAGGAGAGTGACTCTTGGAGTTTATTTGTGAAAGATGCTTTTCTAGGTAGGAATGTCGATCAATATCCAAATCTTGAATTGATAGGCAAGAAAATAGTAGAAAAGTGTGGAGGGGTGCCTTTAGCTCTGAAAACATTGGGGATTATCTTGCAAACAAAATTATCTCAATCTGAATGGGTTGAGATATTGGAGACTGATTGGTGGCATTTACCCAAGAGTAACAGCAACATTAACTCCATACTGAGATTGAGTTACCTTAACCTCCCTTCCAATGTGAAACGTTGTTTTGCTTATTGTTCTATATTTCCCAAGGGCTATGAGTTTGACAAGGGTGAATTAATCAAGCTTTGGATGGCAGACGGTTTGCTCAAGTGTTGGGGAAGACACAATAGCGAAGAAGAGTTAGGTAATGAGTTCTTCAATCATCTAGTGTCGATATCATTTTTCCAACAATCAGTAATGCCAACACGGACTGGTAAGTACTACTTCATCATGCATAATATTGTCAATGATTTGGCGAAATCAGTTTCAGGAGAATCCCGCTTACGAATAGAGGGTGACAATGTGCAAGATATCCCTGAAAGGACGCGTCACATCTGGTGCTGCCTTGATTTGAAAGACGGTGATAGAAAACTAGAGCATATTAGTAAAATTGAGGGACTGCACGGTTTAATGGTAGAAGCACAGGGCTATGGTGACCAACGCTTTAAGATAAGCACCAATGTGCAGCAAAATTTGTTTTCAAGACTAAAATATTTGCGGATGTTGTCTTTCTCTGGTTGCAATCTCTTAGAACTAGCTGATGAAATAAGAAATTTAAAGCTTTTGCGCTATCTAGACCTTTCTTACACTGAGATTACAAGCTTACCTAATTCCATTTGTATGCTGTATAATTTGCATACACTCTTATTGCAACATTGTTTTAAACTGACTGAGCTCCCTTCAGAGTTTTACAAACTCATCAATTTACGTTATCTTAATTTGGAAGGCACTCGTATGAAAAAGATGCCAATGAAGATAGGAAGGTTAAACAATCTTCAGATGCTGACTGATTTTGTTGTGGGAGAGCAGTGTGGATTTGATATTAAGCAGTTCGCGGAACTCAACCATCTTCAAGGAAGGCTTCAAATTTCTGGGTTGGAAAATGTCATTGATCCAGCAGATGCCGTGGCAGCAAATTTGGAAGATAAGCAACATTTAGAAGAATTAAGTATGTCATACGGTGAATGGAGAGAAATGGATGGCTTAATAACGACATCACATGCCTCTGTCTTGGAGGCTCTTCAACCAAATAGAAAGCTCATGAGGCTCACCATCAAAAGCTACAGAGACAGCAGCTTACCAAATTGGCTTGGGGATCGTCATTTACCCAATTTAGTATCTCTTGAATTGTTGGGATGTAAACTTCGTTCCCAGATGCCACCACTTGGGCAGTTCCCCTCTCTCAAGAAGCTTTGCATTTCAGGCTGTGATGGAATAAAGATCATTGGTACAGAGTTTTACGGCTCTAATTCATCAAATGTTCCATTTAGATCACTTGAAACTTTGCGGTTTGAGCACATGTCTGAATGGAAGGAATGGTTATGTCTTGAATGTTTCCCATTGCTTCAAGAGCTTTGTATAAAACATTGTCACAAGTTGAAAAGTGCCCTGCCTCAACACCTTCCTTCTTTGCAAAAATTGGAGATTATTGATTGCGAATTGTTGGAGGCTTCAATTCCCAAGGCTGATAATATCAGTGAGCTAGAACTAAAGAGATGTGATGAAATTTTGATAAATGAATTGCCATCCAGCTTGAAAAAGGTCTTTCTTTGTGGAACTCGGGTCATTCAATCTTCACTAGAGAAAATTATATTGAACAGTGCCTTTCTTGAAGAGTTGGAAGTTGTAGACTTCTTTTGTCCAAATCTAGAATGGTCATCTTTGGATTTTCTTAGCTGTAATTATCTTCACACTCTAACTATGACATGTTGGCACGCTTCATCCTTGCCTTTTGCACTACACTTGTTCACCAATCTTAATTCTCTCGTGTTGTATGATAGTCCATGGCTGGAATCGTTTTTCGGGAGGCAGTTGCCTTCCAACTTATCCAGCCTCAGAATAGAAAGATGCCCTAAATTGATGGCTTCGAGAGAGGAGTGGGGTTTGTCACAACTCAAGTCTCTGAAACAATTCAGTGTTAGTGATGATTTTGAAATCTTGGAGTCCTTTTCGGAGGATGGTTTGCTGCCAACAACTATAAACTCTCTTGAATTGATAAACTGTTCGAACCTAAGAATAATAAACTACAATTGTCTTCTCCACCTCACTTCACTTGAATATCTATATATTGAAGACTGCCCTTGTCTTGAAAGCTTACCAGAGGAGGGTCTACCCAGCTCCCTTTCTACTTTGTCCATTCATGATTGTCCATTAATTAAGCAGCTGTACCAAAAGGAGGGAGGCGAGCGTTGGCGTACAATTAGTCACATCCCTTCTGTGACAATTTCCTGA 3438 0.3973 MAAQHSVGGAFLSSVFQEIHRRLALTRYYRNYYDEEVAKKLEITLSSINEVLDDAETKQYQNPDVKKWLDDLQHEVYELEQLLDLISTDALQRKGTVQRFVSGFIKRSPYKVLLQRLQFLAWQKVILGLQEEATRDNHVWENLSTTRSLVDESSIYGRYHEKEEIIHFLLANSDNDNQVSIISILGLGGMGKTTLAQLVFNDHRMTEQFEIKAWANVSESFDLVGLTQSILWSFQSFQSHNEDLEILQHQLQQCLTGKRYLLVLDDIWSKDGNMWEHLLLPFSRGSSQGKVIVTTRDKEVASIMGSTRLLHLKQLEESDSWSLFVKDAFLGRNVDQYPNLELIGKKIVEKCGGVPLALKTLGIILQTKLSQSEWVEILETDWWHLPKSNSNINSILRLSYLNLPSNVKRCFAYCSIFPKGYEFDKGELIKLWMADGLLKCWGRHNSEEELGNEFFNHLVSISFFQQSVMPTRTGKYYFIMHNIVNDLAKSVSGESRLRIEGDNVQDIPERTRHIWCCLDLKDGDRKLEHISKIEGLHGLMVEAQGYGDQRFKISTNVQQNLFSRLKYLRMLSFSGCNLLELADEIRNLKLLRYLDLSYTEITSLPNSICMLYNLHTLLLQHCFKLTELPSEFYKLINLRYLNLEGTRMKKMPMKIGRLNNLQMLTDFVVGEQCGFDIKQFAELNHLQGRLQISGLENVIDPADAVAANLEDKQHLEELSMSYGEWREMDGLITTSHASVLEALQPNRKLMRLTIKSYRDSSLPNWLGDRHLPNLVSLELLGCKLRSQMPPLGQFPSLKKLCISGCDGIKIIGTEFYGSNSSNVPFRSLETLRFEHMSEWKEWLCLECFPLLQELCIKHCHKLKSALPQHLPSLQKLEIIDCELLEASIPKADNISELELKRCDEILINELPSSLKKVFLCGTRVIQSSLEKIILNSAFLEELEVVDFFCPNLEWSSLDFLSCNYLHTLTMTCWHASSLPFALHLFTNLNSLVLYDSPWLESFFGRQLPSNLSSLRIERCPKLMASREEWGLSQLKSLKQFSVSDDFEILESFSEDGLLPTTINSLELINCSNLRIINYNCLLHLTSLEYLYIEDCPCLESLPEEGLPSSLSTLSIHDCPLIKQLYQKEGGERWRTISHIPSVTIS* 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4640 1145 Gene3D Ribonuclease Inhibitor 531 932 IPR032675 -
Tpr3g4640 1145 PANTHER OS05G0414200 PROTEIN 23 1021 - -
Tpr3g4640 1145 SUPERFAMILY RNI-like 825 1118 - -
Tpr3g4640 1145 Gene3D - 136 309 IPR027417 -
Tpr3g4640 1145 ProSiteProfiles Leucine-rich repeat profile. 590 611 IPR001611 GO:0005515
Tpr3g4640 1145 Pfam NB-ARC domain 161 400 IPR002182 GO:0043531
Tpr3g4640 1145 PANTHER DISEASE RESISTANCE PROTEIN RP 23 1021 IPR044974 GO:0006952
Tpr3g4640 1145 Pfam Rx N-terminal domain 35 96 IPR041118 -
Tpr3g4640 1145 Coils Coil 38 58 - -
Tpr3g4640 1145 Gene3D Ribonuclease Inhibitor 945 1132 IPR032675 -
Tpr3g4640 1145 Gene3D - 24 116 - -
Tpr3g4640 1145 PRINTS Disease resistance protein signature 181 196 - -
Tpr3g4640 1145 PRINTS Disease resistance protein signature 254 268 - -
Tpr3g4640 1145 PRINTS Disease resistance protein signature 351 365 - -
Tpr3g4640 1145 PRINTS Disease resistance protein signature 586 602 - -
Tpr3g4640 1145 SUPERFAMILY L domain-like 480 884 - -
Tpr3g4640 1145 Gene3D - 314 399 IPR042197 -
Tpr3g4640 1145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 414 IPR027417 -
Tpr3g4640 1145 Gene3D - 400 491 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4640 Tpr-Chr3 51420940 51426408 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4640 179 804 WRKY Transcription Factor Family AT5G45050 22.600 7.47e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4640 - - mtr:MTR_3g021170 1525.76