Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4639 ATGGAAAGGATGTCTTCATCATCTTCATCATCATCAACCTTCAATTTGAATTCTCATCAATGGAAGTATGATGTGTTCATAAATTTCAGAGGGGAAGACACGCGCAAGAACTTGGTTTCACATCTATATGCTGCTCTATTAAACGCCGGAATCAACACTTTTCTTGACGATGAAAAGCTTAAAAAGGGATGGGAAGTAGAGCCAGAACTATTGCGAGCAATTCAAGGTTCTCAAATATGCTTAGTTATTTTCTCAGAACACTACACTCAATCTAGTTGGTGTCTTGTTGAACTGGTGAAAATCATGGAACACCGCAGAAGTAATAATAATGGTCCAGTGGTTATACCCATATTTTACCATGTTGACCCATCTGTCGTTCGTCGTCAAGGGGGTGATTTTGGAAAAGCTTTGGAAGCTATTACCAAAAGAATTCAACCAGAAAAAGAGAGGCAAGAACTTTTGCGGACGTGGAAGCGTGCTCTCAATCAAGCTGCAAATATTTCAGGATGGGATTCCAGCACTTTCAGGAGTGAAAATGAACTAGTGAATAAAATTGTTGACGAAGTTCGGAGAAAGGTGGAAAACACATTCTTACCCAATACGGAATTCCCAGTTGGACTAGACTCCCGTGTGGACCAAGTGTTTATGTCGATTGAAAATCAATCAAGCAAAGTTTCTATGGTAGGGATCTGGGGAATGGGTGGGTTGGGTAAAACTACCACAGCCAAAGGCATCTACAATAAAATTCATCGCAAATTTGTCCATAGAAGTTTCATTGAGAATATTAGACAAACTTGCGAATCAGATAAAGGGTATATTCGGTTACAGCAACAACTTCTTTCAGATCTCTTCAAAACAAAGGAGAAGATACACAACATTGCATCGGGGACAGCTATTATCAACAAAAGAATCTCTGAAAAAAAGGTGCTCATTGTACTCGATGATGTGACCAAAGAACAGCAAGTTAAAGCTCTATGTGGAAATCCTAAATGCTTAGGTTTGGGAAGTGTACTCATTGTTACAACAAGGGATGCACACATACTTAGGAGACTTGAAGTTGACTGTGTCTGTACAGCAGAAGAAATGAACGAAAACGAGTCCCTTGAGCTTTTTAGTTGGCATGCTTTTAGAAGCGCGTCTCCAAGAGCAAATTTCAGTGAACTCTCCCAAAATGTAGTTAATTACTGTGGAGGATTACCCCTGGCTGTGGAAGTCCTCGGATCTTACTTATATAAAAGGACAAAAGAAGAATGGAAAAGTGTGCTATCAATATTAGAAAAAATTCCCAATGATGAAGTGCAAGAGAAACTGAGAATAAGCTATGATGGTTTAACGGATGACACGAAAAAGGCTATATTTCTTGATGTATGTTGTTTCTTTATTGGCAAGGACAGAGACTATGTTACCGAGATACTAAATGGGTGTGGACTTTTTGCTGATATTGGAATTGCTGTCCTCATAGAGCGGAGCCTTCTAAAAGTTGAAAAGAATAACAAGCTTGGAATGCATGATTTAATAAGAGACATGGGAAGAGAAATTGTTCGTGAAAGTTCAAAAGAAGATCCTGGGGAGCGTAGTCGGTTGTGGTTTCAGGAGGATGTACATGATGTTTTAACAAAGAATACGGGAACACAAAAAGTTGAGGGATTGATTTTGAACTTGCAAAGAAAAGGTAGATATAGCTTCAATGCCAATGTTTTCCGGCAGATGAAGAACATGAGACTTTTGCAACTTGATTGTGTTGGCCTAACTGGAGATTTTGGACATCTTTCCAAACAATTGAGATGGGTCAATTGGCAACGATCTACCTTCAACTGTATACCCAATGACTTTTATCTAGGGAATCTAGTTGTTCTTGAATTAAAATATAGCCATATTAAACAAATTTGGAAGGAAACCAAGTTGTTGGACAAGCTAAAAATACTGAATCTCAGTCATTCCAAGTACTTGAAAAGCACCCCTGACTTTTCAAAATTACCGAATCTAGAAAAGCTCATTATGAAGGATTGTCCAAGTTTGTCCGAGGTGCACCCGTCCATTGGAGTTCTTAAGAATCTTCTTCTGATAAATGTGAAGGACTGTACAAGTCTTGGCAATCTACCAAGGGAGATCTATCAGTTGATATCCGTGAAAACACTCATTCTTGATGGTTGTTCAAAGATTGACAAATTGGAAGAAGATATAGTGCAAATGACATCCTTGACAACTTTAGTTGCAGCAAATACTGGCGTAAAACAAGCACCCTTTTCCATAGTTAGATCAAAAAGCATTTTGTATATATCCCTATGTGGATATGAAGGATTATCACGTGATATTTTTCCTTCTCTCATTTGGTCTTGGATGTCACCAACAATGAATTCCTTACCACATACTCCCCCCACTTCCTTGGATGTAGAGAGTACTAATGTGGTTTTGAGTTATCAATCAACAATGCACAGTAGTTCTTCAGAATATAGAAGTGTTACGGTACAATGCCAATCGGCGATTCAACTAATTCAAAAATTAAGTAGTTTTGTTGATGGTCTATATGGTGCAAAGCTTACTGAATCGGAAACATCACATGCATCAGATATCTCGGATCTTTCCTTGAAATCTCTTTTGGTTACAATGGGAAGTTGCAACATAGTCGTCGATGCTCTTGACAAGAGCTTATCGCAGGGATTGACAACCAATGATTCTAGTGATTCTTTCCTTCCGGGTGACAATTACCCTTCGTGGTTAGCTTATAAAAGTGAAGGACCTTCAGTGCGTTTTCAAGTGCCCGAGGACAGTGATGATTGCTTGAAGGGAATAACTTTTTATGTTGTTTATTCATCTGCACCCGAAAACATGGAACCTGAATGTCTCACTAGTATTTTGATCATTAATTACACAAAATTCACTCTCCATATACACAAGCGAGACACAATAATGTCATCTAACGATGAAGATTGGCAGAATGTTGTATCAAATTTAGCAGTTGGGGACAGTGTGGGGATTTTTGTAGCTTTTGGACATGGATTGACCGTTAAGAAGACAGTTGTCTACCTAATATATGGCCAGTCAAAGGCTATGCAAATTAATCCATCAATTACTTTGGAAGTTGAACCATCTAGTGAAATTCAGATGGAGCCATTACCTGAATTGGAAGTGCAACCATCATCTAATGTGAAAAGGGAGCCACCACCTGAAGATGAAGTTCAGCCATCACCTGATGTGAAGATGGAGCCATCACTTGTCGTCAAGAATGAGCCATTACCTGAACTGGAAGTGCAACCATCGTCTAATGTGAAAAGGGAGCCATCACCTGATGTGAAGATGGAGGTGGAGCCATCACTTGTTGTCAAGAATGAGCAATTACCGAAGAGAAATAAAAATATATTTGCAAGACTTTCAAAGAGAGTGGGAGAATGTTTACGCTTGAACTAG 3408 0.3897 MERMSSSSSSSSTFNLNSHQWKYDVFINFRGEDTRKNLVSHLYAALLNAGINTFLDDEKLKKGWEVEPELLRAIQGSQICLVIFSEHYTQSSWCLVELVKIMEHRRSNNNGPVVIPIFYHVDPSVVRRQGGDFGKALEAITKRIQPEKERQELLRTWKRALNQAANISGWDSSTFRSENELVNKIVDEVRRKVENTFLPNTEFPVGLDSRVDQVFMSIENQSSKVSMVGIWGMGGLGKTTTAKGIYNKIHRKFVHRSFIENIRQTCESDKGYIRLQQQLLSDLFKTKEKIHNIASGTAIINKRISEKKVLIVLDDVTKEQQVKALCGNPKCLGLGSVLIVTTRDAHILRRLEVDCVCTAEEMNENESLELFSWHAFRSASPRANFSELSQNVVNYCGGLPLAVEVLGSYLYKRTKEEWKSVLSILEKIPNDEVQEKLRISYDGLTDDTKKAIFLDVCCFFIGKDRDYVTEILNGCGLFADIGIAVLIERSLLKVEKNNKLGMHDLIRDMGREIVRESSKEDPGERSRLWFQEDVHDVLTKNTGTQKVEGLILNLQRKGRYSFNANVFRQMKNMRLLQLDCVGLTGDFGHLSKQLRWVNWQRSTFNCIPNDFYLGNLVVLELKYSHIKQIWKETKLLDKLKILNLSHSKYLKSTPDFSKLPNLEKLIMKDCPSLSEVHPSIGVLKNLLLINVKDCTSLGNLPREIYQLISVKTLILDGCSKIDKLEEDIVQMTSLTTLVAANTGVKQAPFSIVRSKSILYISLCGYEGLSRDIFPSLIWSWMSPTMNSLPHTPPTSLDVESTNVVLSYQSTMHSSSSEYRSVTVQCQSAIQLIQKLSSFVDGLYGAKLTESETSHASDISDLSLKSLLVTMGSCNIVVDALDKSLSQGLTTNDSSDSFLPGDNYPSWLAYKSEGPSVRFQVPEDSDDCLKGITFYVVYSSAPENMEPECLTSILIINYTKFTLHIHKRDTIMSSNDEDWQNVVSNLAVGDSVGIFVAFGHGLTVKKTVVYLIYGQSKAMQINPSITLEVEPSSEIQMEPLPELEVQPSSNVKREPPPEDEVQPSPDVKMEPSLVVKNEPLPELEVQPSSNVKREPSPDVKMEVEPSLVVKNEQLPKRNKNIFARLSKRVGECLRLN* 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4639 1135 ProSiteProfiles TIR domain profile. 21 193 IPR000157 GO:0007165
Tpr3g4639 1135 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 26 1013 - -
Tpr3g4639 1135 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 170 IPR035897 -
Tpr3g4639 1135 PRINTS Disease resistance protein signature 227 242 - -
Tpr3g4639 1135 PRINTS Disease resistance protein signature 303 317 - -
Tpr3g4639 1135 PRINTS Disease resistance protein signature 396 410 - -
Tpr3g4639 1135 PRINTS Disease resistance protein signature 634 650 - -
Tpr3g4639 1135 Gene3D - 361 445 IPR042197 -
Tpr3g4639 1135 MobiDBLite consensus disorder prediction 1031 1102 - -
Tpr3g4639 1135 Gene3D - 190 356 IPR027417 -
Tpr3g4639 1135 SMART till_3 22 167 IPR000157 GO:0007165
Tpr3g4639 1135 SUPERFAMILY L domain-like 502 777 - -
Tpr3g4639 1135 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 1013 IPR044974 GO:0006952
Tpr3g4639 1135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 454 IPR027417 -
Tpr3g4639 1135 Pfam NB-ARC domain 211 431 IPR002182 GO:0043531
Tpr3g4639 1135 Pfam TIR domain 22 196 IPR000157 GO:0007165
Tpr3g4639 1135 Gene3D Ribonuclease Inhibitor 507 745 IPR032675 -
Tpr3g4639 1135 Gene3D - 19 189 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4639 Tpr-Chr3 51412654 51418632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4639 23 751 WRKY Transcription Factor Family AT4G12020 29.067 3.21e-79 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4639 - - mtr:MTR_8g011710 1278.85