Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4611 ATGGACGCAACAACATCGGTGGCAAGTGCATTTCTCTCTGCAACCGTTGAATCCTTATTGCAGAAACTCGCTTCCTCAGAGCTCATTGATTACGTCAAATACAGCCATTTGAATATCTTAAAACTCACTGTATTGGAAACAAAGCTTCTCACTCTTCACTCAGTTCTTCACGATGCTGAACACAAGCAGTTTTTCAATCCTGAAGTTAAAAACTGGCTTGATGAGTTGTATAATGTAATCTCTACTGCCGAAGATTTGTTCGATGAAATCGGTTACAGTTACCTTCAATGTAAGGTTGAGAATACTCAATCTCAACATGATTTCGAGTATAATTCCGATATCGCGATGATTTGTCAAAAGCTGCAAGGGTTTGCTGAACAGATAGAGATCCTTGGTTTGCAATCTGTAACTGTAAGTGTTAGGGTTTCTGTTAAAATGTGTTCAAATTTAGTAGGAAATGAAACTGTTGTAGTTGGTAGGAAGAATGATAAAGAATTATTGATGAATATGTTGATGTCTGAGAGTGGTAATAATAATAGTAATAACAACTTAGGCGTGGTTGCTGTTTTTGGTGTTGGAGGTGTTGGTAAATCGACACTTGCTCGAATTGTTTATGACGATGAAAAAGTTAATGAGCATTTTGATTTGAAAGCATGGGTCCGTATGTCAGAGGATTTTGATGTTGTGAGAGTAACCAAAACAATTACTGAATCTGTCACTTCAGGGAGTTATGGGATTAATGATCCGGATTACATGCGTGCTGAATTAAAGAAAGAGGTGAGGGGTAGAAGATTCTTGATTGTGTTGGATGGGCTATGGAATTACAGTTATAATGATTGGCATGGGATAGTGGCTCCTTTGATTAAAGGAAAATATGGAAGTAGAGTGGTCATCACAACGCGCTATGAAGAAGTTGCAAAGGTCGCACATACTTTTCCGATTCATAAGTTAGAGCCTCTGTCAGAAGAAGATTGTTGGCCTTTACTCTGCAAGTATGTTTTTGGAAGTGTTGGCAATAAATTCCCAAATTTAGAAGCAATTGGTAGGAATATTGCGAGAAAATGTGGTGGATTGCCATTAGCTGCGAAAATAGTTGGAAGACTTTTAAGTTCAAAGATAGATGAAAAGGAGTGGATTGAAATCATGAACAACGACATATGGAACTTATCAAAGGATAATATTTTACCTTCTTTGCTTCTGAGTTATCAGTATCTTCCCTCTTATTTGAAAAGATGTTTTGCCTATTGCTCAATTTTTCCAAAGGGTTATCCCATTGATAGGAAGCAAATGGTTTTGTTGTGGATGGCACAAGGCTTCCTTGAACATTCTATGGTTGGAAAAGTAGAAGAGGAGGTAGGTAATGAGTATTTTACTGAATTGTTGTCAAGATCCTTAATTGAACAATTGAATGATGATACTGATGAAGAAAAGTTTGTCATGCATTGCCTTGTACATGATTTAGCAACAATTGTATCTGGGAAAAGTGGTCGTGGTAGAATTCACCATTTTTTGTATCATCAAGAAGAGTATGACCTTTACAAGAAGTTTGAAATTGTTGATGATTTTGAATGCTTGCGAAGCTTCCTATCCATTGATTTCTCTTGGAGAATGAATTACATGTCCAGCAAGGTGCTTCATGTATTGCTACCCTCACATGGAAGGCTACGTGCTTTATCGATATCGCATTATTCTAACATCACCACGTTGCCAGATTCACTTGGCAGTTTGGTGCAGTTGCGGTATCTAAATCTCTCGTGCACTGGAATCAAATACTTGCCTGATACCATCTGTGACCTTTACTATTTGCAAACCTTGAAATTATCAGGGTGCAGAAAACTCATTGAATTGCCTGCACATGTTGGGAATTTAATTAATTTACGTCACCTTGATATCAGCCATACAAATATAGAGGAGATGCCAATGCAACTTGTTGAACTAGAAAACCTTCAAACTCTCACTGTTTTTGTAGTGGGCCAGCAAGAAGTTGGGTTAAGTGTCAGAGAGCTTTCAAAGTTTCCTAATCTTAGGGGAAAACTTCACATCCAGAACCTGCATAAAGTCATTGATGTTAGTGAGGTGTGTGATACCAAATTGAAGAGTAAAGAACACATTGAAGAGTTATCTTTATATTGGGGTAAACAAACTGAAGATTCACCATCACAGGAAGTTATTCTTGATGAGTTACAACCATCAACAAACTTGAAGAAATTGAGCATCAGTTTCTATGGTGGAACAAGCTTTCCAAGTTGGTTGGGAGATTGTTCGTTTTCTAACATGGTGTACCTTTGCATCAAATCTTGTGAGTATTGCATAACACTTCCTCCATTAGGGCAACTACCTTCTCTCAAAGACCTTGAGATTGATGGTATGAGCAAAGTGGAAACAATTGGCCCAGAGTTCTATGGCATGATAGGAGGAAGTACTAATACCCCATTCCAACCATTTCCATCTCTCGAGAAGCTACATTTTGAGAGGATGTCTAATTGGAAAGAATGGCTTTCCTTCGGAGGCAGCAAGTTTCCTTTTCCTCGGCTTAAAACTCTGTATTTAGATAACTGTTCAAAACTGAGGGGACATTTGCCTAGTCATCTTCCTTCCATAGAGAAAATTACAATACTTTGGTGCAGTCATTTGCTGGCTACACTATCTACTCTGCAGTGGCTTTCCTCAGTCAAATATATAAATTTGATCACTAGAGGTTCCTCCGAATTGCCGTTGCTTGAAAATGATTCACCATGTCTTCTGCAGATTGTAACAATATTCGGCTTTAACAAGCTACTATCTCTGCCTAGAATGTTTCTGAACTCTACTTCTCTTCAACACTTGCATCTCTGTTATATTTCCTCTCTCACTGCCTTTCCATCTAATGGTCTTCCCACTTCATTGAAGTCACTTGATATTGATGAGTGTAAGAATTTAGCATTCTTGCCTCCTGAAACTTGGAGCAATTACACATCACTTGTGACCTTGAACTTAAAAAATTGCTGTGACGGACTTACCTCCTTTCAACTGAATGGTTTTCCTATGCTCCATAGTCTTTCCGTCGATGGATGTAGCAATTTGGAGTCTATCTTTATTTCAGAAAATGGCTCCCTTGGCTCGTCAACTCTCCAATCACTTCAGGTCAGCAACTGTGACGCACTAAGATCACTACCTCAACATATGGAAACCTTAACCGCTCTTGAAAGTTTGACTCTCGACAGTTTATCGTCATGCTGGAAAGGAGTTCGCCTCCCTCTCAAGTTTCGATTAACACCTTCTCATTCCATGACAAGTACTACAACTGTGACTGAACGGGGTCTCCAAAACCTTACAGCTCTGTCTGATATGGAAATTGGAGGTAATAATGTTGTTAACACCTTGCTAAAAGAGCAATTGCTGCCCATTTTCCTTGTGTCTCTGACAATAACCAATCTCTCTGAAATGAAATGCTTAGAAGGAAATGTGCTTCAACACATCTCCTCTATGAAAAAGCTTGCATTTAAATTTTGTTCAGGGCTTGAGTCTTTTCAAGCGACGTTGCCTTCATCTCTGAAATCACTCGTATTTGAAAATTGTCCAAAACTCATGTCCTTGCCAGATAAGTTGCCTTCCTCTTTGGAGACACTGGAATTTGATGATTGTGCAAGACTTGGGTTATTGCCAAGACACGGGTTTCCTTCCTCTCTTAAGGTACTAAGCATTAGCCAATGCCCGTTTTTAGAAGCAAGGTATGCCACTCCGAGAAGGGGTCAAGTGTCCAAGATCGCTCACATCCCTGTCATAAAAATAAATTATCAAGCAATAATATGA 3792 0.3887 MDATTSVASAFLSATVESLLQKLASSELIDYVKYSHLNILKLTVLETKLLTLHSVLHDAEHKQFFNPEVKNWLDELYNVISTAEDLFDEIGYSYLQCKVENTQSQHDFEYNSDIAMICQKLQGFAEQIEILGLQSVTVSVRVSVKMCSNLVGNETVVVGRKNDKELLMNMLMSESGNNNSNNNLGVVAVFGVGGVGKSTLARIVYDDEKVNEHFDLKAWVRMSEDFDVVRVTKTITESVTSGSYGINDPDYMRAELKKEVRGRRFLIVLDGLWNYSYNDWHGIVAPLIKGKYGSRVVITTRYEEVAKVAHTFPIHKLEPLSEEDCWPLLCKYVFGSVGNKFPNLEAIGRNIARKCGGLPLAAKIVGRLLSSKIDEKEWIEIMNNDIWNLSKDNILPSLLLSYQYLPSYLKRCFAYCSIFPKGYPIDRKQMVLLWMAQGFLEHSMVGKVEEEVGNEYFTELLSRSLIEQLNDDTDEEKFVMHCLVHDLATIVSGKSGRGRIHHFLYHQEEYDLYKKFEIVDDFECLRSFLSIDFSWRMNYMSSKVLHVLLPSHGRLRALSISHYSNITTLPDSLGSLVQLRYLNLSCTGIKYLPDTICDLYYLQTLKLSGCRKLIELPAHVGNLINLRHLDISHTNIEEMPMQLVELENLQTLTVFVVGQQEVGLSVRELSKFPNLRGKLHIQNLHKVIDVSEVCDTKLKSKEHIEELSLYWGKQTEDSPSQEVILDELQPSTNLKKLSISFYGGTSFPSWLGDCSFSNMVYLCIKSCEYCITLPPLGQLPSLKDLEIDGMSKVETIGPEFYGMIGGSTNTPFQPFPSLEKLHFERMSNWKEWLSFGGSKFPFPRLKTLYLDNCSKLRGHLPSHLPSIEKITILWCSHLLATLSTLQWLSSVKYINLITRGSSELPLLENDSPCLLQIVTIFGFNKLLSLPRMFLNSTSLQHLHLCYISSLTAFPSNGLPTSLKSLDIDECKNLAFLPPETWSNYTSLVTLNLKNCCDGLTSFQLNGFPMLHSLSVDGCSNLESIFISENGSLGSSTLQSLQVSNCDALRSLPQHMETLTALESLTLDSLSSCWKGVRLPLKFRLTPSHSMTSTTTVTERGLQNLTALSDMEIGGNNVVNTLLKEQLLPIFLVSLTITNLSEMKCLEGNVLQHISSMKKLAFKFCSGLESFQATLPSSLKSLVFENCPKLMSLPDKLPSSLETLEFDDCARLGLLPRHGFPSSLKVLSISQCPFLEARYATPRRGQVSKIAHIPVIKINYQAII* 1264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4611 1263 Gene3D - 402 490 IPR036388 -
Tpr3g4611 1263 PANTHER - 51 981 - -
Tpr3g4611 1263 Gene3D Ribonuclease Inhibitor 914 1082 IPR032675 -
Tpr3g4611 1263 Gene3D - 319 401 IPR042197 -
Tpr3g4611 1263 Gene3D Ribonuclease Inhibitor 1087 1251 IPR032675 -
Tpr3g4611 1263 PANTHER DISEASE RESISTANCE PROTEIN RP 51 981 IPR044974 GO:0006952
Tpr3g4611 1263 SUPERFAMILY L domain-like 888 1235 - -
Tpr3g4611 1263 SUPERFAMILY L domain-like 480 897 - -
Tpr3g4611 1263 Pfam Rx N-terminal domain 13 105 IPR041118 -
Tpr3g4611 1263 Pfam NB-ARC domain 181 384 IPR002182 GO:0043531
Tpr3g4611 1263 Gene3D - 139 312 IPR027417 -
Tpr3g4611 1263 Gene3D Ribonuclease Inhibitor 517 905 IPR032675 -
Tpr3g4611 1263 PRINTS Disease resistance protein signature 186 201 - -
Tpr3g4611 1263 PRINTS Disease resistance protein signature 259 273 - -
Tpr3g4611 1263 PRINTS Disease resistance protein signature 355 369 - -
Tpr3g4611 1263 PRINTS Disease resistance protein signature 957 973 - -
Tpr3g4611 1263 Gene3D - 15 129 - -
Tpr3g4611 1263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 416 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4611 Tpr-Chr3 51198402 51203754 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4611 183 796 WRKY Transcription Factor Family AT5G45050 22.074 5.72e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4611 - - mtr:MTR_3g032370 1277.31