Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4607 ATGGATGATGTAAGTTCTGAGGTTTCTGATAAGCTTTCAGATAATCTATTTTCAAATCCAGAATCATGTAGCAATTTTCAAGCTTCAACATCTTTGAACACAGTTACTGAATTATCTAAGAACACCACAAAAACATGCACTCACACTCACACATGTAATCCACCTGGTCCTGATGAAGCTATTCATACACACACATGTTTTCACACACATACTCAAGTTTTTGCATCTGAAGATGACACAAATTCAAGGCCAAAAAGGACTTCTGGAAATAGAGAAGCTGTTAAAAAGTATAGGGAGAAGAAAAAGGCACAAACAGCTTATTTAGAGGAAGAAGTTAAGAAGTTGAAAGTGTTGAATCAACAACTTTTGAGGAAATTACAAGGGCAGGCACTACTTGAAGCAGAATTGTTAAGGTTAAGGAAAGTTTTTGTACAACTTAAGGGAAAAATTGATAGTGAATTAGGTTCTTTCCCTTTTCAAAAGCAGTGTTTCTCTTCTAGTGTTTACAAAGGTGATGCTAATTTGGTTTCTACTTCTCAACCAGTTGATCTTGAGCTATGTAGCTCCGAAACTTCGAATTTTGCATATGCAAACAACATGACTAGTACTGAAGTACAAACTAAGGACACACTGAATAACTTCATGTCATCAGCATCTCAAGATGGACAATTAGACACACTAGTTTCTTTTGTGAGTTTCTCATCAACTGTTATCTATATATGTACTGCTACTACAGCCTTGGATTGA 747 0.3561 MDDVSSEVSDKLSDNLFSNPESCSNFQASTSLNTVTELSKNTTKTCTHTHTCNPPGPDEAIHTHTCFHTHTQVFASEDDTNSRPKRTSGNREAVKKYREKKKAQTAYLEEEVKKLKVLNQQLLRKLQGQALLEAELLRLRKVFVQLKGKIDSELGSFPFQKQCFSSSVYKGDANLVSTSQPVDLELCSSETSNFAYANNMTSTEVQTKDTLNNFMSSASQDGQLDTLVSFVSFSSTVIYICTATTALD* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4607 248 Pfam Basic region leucine zipper 80 133 IPR004827 GO:0003700|GO:0006355
Tpr3g4607 248 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 127 IPR004827 GO:0003700|GO:0006355
Tpr3g4607 248 PANTHER BASIC LEUCINE ZIPPER 23 1 169 - -
Tpr3g4607 248 CDD bZIP 90 127 - -
Tpr3g4607 248 Gene3D - 70 147 - -
Tpr3g4607 248 SMART brlzneu 77 145 IPR004827 GO:0003700|GO:0006355
Tpr3g4607 248 SUPERFAMILY Leucine zipper domain 84 127 IPR046347 GO:0003700|GO:0006355
Tpr3g4607 248 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4607 Tpr-Chr3 51159924 51162310 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4607 42 179 bZIP Transcription Factor Family AT3G51960 55.862 1.57e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr3g4607 bZIP_2 1.6e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4607 K25785 - gmx:100527780 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4607 3 51159924 51162310 Tpr3g4607 3 51159924 51162310 ECH