Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4599 ATGAACAAACCAAGTTGTTCATTGTTTCTTCTATCCTTTCTCATTGTAACTCTCTTTGTGGATGAAATCCATGGAAGCAAACAAAGTAGAGCTCTTGACAAATTGCAAAAGTCAAAGTTCAATGCAAATTCACAAATTGACATGAGTCATTTTAAGGCACAAAAGAATATTTTGCTTGATGCAATGATTCATTCTCAAGATGGTATGAAAGAAAAAGATAGGATTGAGAAGCTACCAGGGCAACCAAATGTGAAATTCTCTCAATATGGAGGGTATGTCACGGTGGACAAATTCGCAGGACGTGCTTTTTACTATTACTTTGTCGAAGCTGCTCATTCGAAAGAAACATTGCCTCTTCTTCTTTGGCTCAATGGAGGTCCTGGATGCTCATCTCTTGCCTATGGAGCAATGGAAGAACTTGGACCCTTCCGTGTGAACAGTGATGGAAAAACCCTTCACAAAAATAACTATTCATGGAACTATGCTGCAAATGTATTATTCCTTGAATCACCAGCTGGGGTAGGATTTTCTTATTCAAACAAATCATCTGATTATGACAACAATGGAGATAGAAAAACAGCTACAGATAACTATGTATTTTTAGTAAATTGGTTAGAGAGATTTCCTGAATATAAGAATAGAGATTTGTTCATTACTGGTGAAAGCTATGCTGGTCATTATGTTCCTCAACTTGCACACAATATTCTTTACCATAACAAAAAGGCTAATAGGACAATTGTCAACCTCAAAGGAATTATGATTGGGAATGCAGTGATCAATGATGACACAGATAATCAAGGAATGAATGATTATCTTGCTAGCCATGCAATTATATCAGACCAAGCAGCACATAATATCAACACATTTTGTAATTTATCATCAAATTCTAATCAAAATACTGAATGCAATGAAGCATTAAGTCAAGTTGATAAGAACACAGCGTTCCTTGATGTGTACAACATCTATGCTCCACTATGCAATAATCACAACCTCACTACTTGTCCCAACAAGATCTCGGTTGTTCTTGATCCTTGCAGTGATGATTATGTACAAGCATATTTGAATAGGGATGATGTTCAAGAGGCCCTTCATGCCAATGTCACCAAACTCAAATATGATTGGGAGCCTTGTAGTGATATCATTTCTAAGTGGGGGGATAGTCCTTCAACAATTATTCCCCTTTTACATGAATTCCTTAATAATGGACTAAGGGTGTGGATTTTTAGTGGTGATATAGATGCAAGGGTGCCTGTTACTTCAACCAAATATTCCATTAAAAAGATGAATCTTTCTATTAATACTACTTGGTATCCTTGGTTCATAAATGGAGAGGTTGGTGGGTTTGCTGAAGTATATAAGGGAGGTTTAACTTTTGCCACAGTGAGAGAAGCAGGACATCAAGTACCAAGCTACCAACCAGCAAGAGCCCTCTCTCTAATCAAGCATTTCTTAAATGGCACTCCTCTTCCTAATACTCATAGATTATAA 1488 0.3683 MNKPSCSLFLLSFLIVTLFVDEIHGSKQSRALDKLQKSKFNANSQIDMSHFKAQKNILLDAMIHSQDGMKEKDRIEKLPGQPNVKFSQYGGYVTVDKFAGRAFYYYFVEAAHSKETLPLLLWLNGGPGCSSLAYGAMEELGPFRVNSDGKTLHKNNYSWNYAANVLFLESPAGVGFSYSNKSSDYDNNGDRKTATDNYVFLVNWLERFPEYKNRDLFITGESYAGHYVPQLAHNILYHNKKANRTIVNLKGIMIGNAVINDDTDNQGMNDYLASHAIISDQAAHNINTFCNLSSNSNQNTECNEALSQVDKNTAFLDVYNIYAPLCNNHNLTTCPNKISVVLDPCSDDYVQAYLNRDDVQEALHANVTKLKYDWEPCSDIISKWGDSPSTIIPLLHEFLNNGLRVWIFSGDIDARVPVTSTKYSIKKMNLSINTTWYPWFINGEVGGFAEVYKGGLTFATVREAGHQVPSYQPARALSLIKHFLNGTPLPNTHRL* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4599 495 Gene3D - 391 486 - -
Tpr3g4599 495 SUPERFAMILY alpha/beta-Hydrolases 71 490 IPR029058 -
Tpr3g4599 495 PANTHER CARBOXYPEPTIDASE 9 490 - -
Tpr3g4599 495 Gene3D alpha/beta hydrolase 69 328 IPR029058 -
Tpr3g4599 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 490 IPR001563 GO:0004185|GO:0006508
Tpr3g4599 495 Pfam Serine carboxypeptidase 80 486 IPR001563 GO:0004185|GO:0006508
Tpr3g4599 495 Gene3D - 345 381 - -
Tpr3g4599 495 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Tpr3g4599 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Tpr3g4599 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Tpr3g4599 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Tpr3g4599 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 456 469 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4599 Tpr-Chr3 51090357 51096878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4599 353 489 Calmodulin-binding Proteins AT2G22960 31.387 1.24e-15 73.6