Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4584 ATGGCTGCAACGATGATCGGAGGTGCTTTTCTCTCTGCAACTGTTCAGACCTTAGTTGAGAAACTTGCTTCAAAAGAGTTTCTTGATTACATCAAAAACACCAAGCTAAATGTCTCACTCTTGAGGCAGTTAAAAACAACACTGCTCACTCTTCAGGCTGTAATGGATGATGCAGAGGAGAAGCAGATCAACAATTCTGCTGTCAAACAATGGCTTGATGATTTGAAAGATGCTGTCTTTGATGCTGAGGATTTGCTCAATCAGATCAGTTATGACTCCCTTCGATGCAAGGTGGAAAATACACAAGCTGCAAACAAAACTAATCAGGTGTGGAATTTCTTTTCATCTCCTTCTAAAAACTTGTATGGAGAGATCAATTCTCAGATGAAGATCATGTGCGAAACCCTACAGCTTTTTGCACAACATAAAGATATACGTGGTTTGCAAACTAAAAGTGCTAGAGTTTCTCATAGACCACATTCAAGTTCAGTGGGAAATGAATCTGTCATGGTGGGTAGGAAGAATGAAAAACAGACAATAATGAACATGTTGCTATCACAGAAGGACACAACCAGTAATAATATAGGTGTTGTTGCAATTTTGGGCATGGGAGGTTTAGGAAAAACTACCCTTGCCCAACTTCTTTACAACGATGAAAAAGTTCAACAACATTTTGATATGAAAGCCTGGGCTTGTGTATCTGATGATTTTGACACTATGAGAGTAACCAAGTCTCTCCTTGAATCTATCACTTCCAAAACTTGGGAAAGCACTAATCTTGATTTCCTTCGAGTTGAATTAAAGAAAATCTCGAGGGAGAAAAGATTTTTGTTTGTGTTGGATGATATGTGGAATGATAATTACAATGATTGGGAAGATCTGGTAAGTCCCTTCATTGATGGAAAACCTGGAAGCAGGGTGATTGTAACAACGCGTCAACAAAAAGTTGCAGATGTGGCACGCACATTTCCTATTCAAGAATTAGAACCACTATCAAATGAAGAATGCTGGTCTTTACTATCAAAGCATGCATTGGGAAGTGATGAGTTTCGCCATAGTAAAAACACAACCCTCGAAGAAATTGGCAGGAAGATTGCAAAAAAGTGTGGTGGACTGCCAATAGCTGCTAAAACACTAGGAGGACTTCTACGTTCAAAGGTAGACACAATTGAGTGGACTTCAATTTTGAACAGTGATGTATGGAACTTACCAAATAATAATATTCTTCCTGCTTTGCATTTGAGTTATCAATATCTTCCCTCTCATTTGAAAAGATGTTTTGCATACTGTTCAATTTTTCCAAAGGATTACCCACTTGATAGGAAGAAATTGGTTTTGTTATGGATGGCAGAAGGCTTCCTTGATTATTATCAAGGGGGAAAAGAGATGGAGGAATTAGGTGATGATTGCTTTGCTGAACTGTTATCCAGATCCTTAATTCAACAATCAAATGATGATGCTCGTGGAAAAATCTTTCTCATGCATGACCTTGTCAATGATTTAGCTACAGTCGTATCTGGAAAAAGTTGCTGCAGGTTAGAATGTGGTGACGTCTCTGAAAATGTTCGTCATATCTCATATAACCAAGAATACTATGACATTTTCAAAAAGTTTGAGAATGTCTACAATTTGAAATTGTTGCGTAGCTTTCTATCTATTACCTCCATGTATCCTTACAATCACATATCCATCAAGGTGGTTGACGATTTCCTACCAACACTCAAAAGGTTGCGTGTGTTATCGTTGTCAAAGTATACAAACATCACAAAGCTTCCGGATACAATTGGCAATTTACTGCAATTGCGGTATCTAGATCTCTCCTCCACTGGAATCGAAAGCTTGCCGGATACAACATGTAACCTTTACAATTTGCAGACATTGATTTTATCAAGTTGTGAGCGTCTAACCGAATTGCCAGTACATATGGGAAATTTAATCAATTTACGTCACCTTGACATAACAGATACGAACATAAAGGAGTTGCCTGTGGAAATTGCAAGACTAGAAAACCTCCAAACTTTGACAGTTTTTGTAGTGGGTAAGCAACATGTAGGGTTAAGCATCAAAGAGCTAAGCAAATTCACAAACCTACAGGGAAAACTTACCATCAAGGACTTGCATAATGTCATTGATTCTAGGGAGGCAGAAGATGCCAACCTAAAAAGCAAAGAGAAAATTGAGGAGTTAGAGCTGTTATGGGGCAAACAAAGCGAAGACTCGCAAAAGGTTAAAGCTGTGTGTGCTATGTTGCAACCACCAATAAACCTGAAGAGCCTGAACATCGGCTTGTATGGCGGGACAAGTTTTCCTAGTTGGTTGGGAAATTCATCGTTTTCTAATTTGGTATCCCTTAGCATCAATAATTGTGAACATTGTATGACACTTCCACCTCTAGGGCAGCTACCTTTTCTCAAAGACCTGAAAATACATGGTATGAAGATATTGGAGACAATTGGCCCAGAGTTCTTTTGTGCACAGGGAGGTGAATGTTCCAATTCTTCCTTCCAACCATTTCCATCCCTTGAGTATATAAAATTTGACAACATGCCAAATTGGAAGGAATGGCTTGACTTTGATGGAATGAATTTTGCTTTTCCTCAACTTAGAATTATGGTGTTACATAATTGTCCGGAACTAAGAGGACAATTGCCTAGCCACCTTCCTCGTATAGAAGAAATTGTAATAAAAGGTTGTGCTCATCTATTGGAAACACCTTCCAGTTTGCATTGGTTGCCGTCAATAAAGAAAATAAAAATCAACGGGCTTGTTGAAAGGACCCAATTGTCATTGCTTGAGAGTGATTCTCCATGTATGATGCAAGATGTAGAGATTGAAGAGTGCGTTACTCTCTTATATCTGCCAAAATTGATTCTGAGAAGCACTTGTCTTCAACACTTGAAACTCTCATCTCTTTCTGCTCTGACTGCATTTCCCTCAAGTGGTCTACCCACTTCATTGCAATCACTTGTTATTCAAAACTGTGAGAATTTATCCTTCCTTCCTCCTGAAACGTGGAGCAATTACACATCGCTTGTGAGTCTTAAGTTATGGAGTAGCTGTGATGCACTTACATCCTTTCCACTTGATGGTTTTCCTGCCCTCCAAACACTTGTGATATATGAAAGTAAGAGTCTGGACTCCATTTATATTTTAGAAAGTCCTTCACGTCAGCCGTCAAACCTCCAATCACTTAATATCACATCCCTTTGTTCGTTGAAAGTCAAGGTTAAGATGGACACACTCACTGGTCTCACAGATTTGTTGTTGCGTTGTGAAGGAGAGTTGTCATTTAGTGAAGGTATTTGTCTACCTCCCAAATTACAATCAATAGATCTGCTGTCGAGGGGAATTAGAACAACGCTGCCTGTAATGGAATGGGGCCTAACCGGTCTTTCAAGATTGAATATTGGAGGTTGTGATGATATAATTAAGACCTTGATGAAGGAGTCGTTGCTACCCATCTCCCTTGTGTCTCTGACTATCTTTGATAATAAAATGAAGGCCTTTGATGTAAGTGGGCTTCGACACCTCTCCTCTCTCGAAATTCTTACCTTTAATTATTGTGAAGAGCTTGAGTCATTGCCAGAAAACTGCCTCCCTTCCTCGCTGAAATCACTTGAATTTTGGTGTTGTTCCAGACTTGAGTCATTACCAGAAAACTGCCTCCCTTCCTCGCTGAAATCACTTGAATTTTGGTGTTGTTCCAGACTTGAGTCATTACCAGAAAACTGCCTCCCTTCCTCGCTGAAATCACTTCGATTTAGCCGTTGTTCCATACTTGAGTCATTACCAGAAAACTGCCTCCCTTCCTCGCTGAAATCACTTTATTTTTGGAATTGTCCCAGACTTGAGTCATTACCAGGAAACTGCCTCCCTTCTTCGCTCAAATCACTTGAATTTTGTTTTTGTGATAAGCTTGAGTCATTACCAGAAGACAACCTCCCTGACTCTCTTCGGAAACTGTACATTTATAAATGCCCATTATTAGAAGAAAGGTATAAAAGGAAGGAACATTGGTCCAAAATTGCACACATCCCTGTCATTAAAATAAATGACCAAACTAAGTGGATGAATATCAGCTCACATGATGAATTGAAGACAAAAGTGAGGCATGTTGTTATTGTCCTGATTCTTCTTGTAAACTTGTTTTAG 4152 0.3919 MAATMIGGAFLSATVQTLVEKLASKEFLDYIKNTKLNVSLLRQLKTTLLTLQAVMDDAEEKQINNSAVKQWLDDLKDAVFDAEDLLNQISYDSLRCKVENTQAANKTNQVWNFFSSPSKNLYGEINSQMKIMCETLQLFAQHKDIRGLQTKSARVSHRPHSSSVGNESVMVGRKNEKQTIMNMLLSQKDTTSNNIGVVAILGMGGLGKTTLAQLLYNDEKVQQHFDMKAWACVSDDFDTMRVTKSLLESITSKTWESTNLDFLRVELKKISREKRFLFVLDDMWNDNYNDWEDLVSPFIDGKPGSRVIVTTRQQKVADVARTFPIQELEPLSNEECWSLLSKHALGSDEFRHSKNTTLEEIGRKIAKKCGGLPIAAKTLGGLLRSKVDTIEWTSILNSDVWNLPNNNILPALHLSYQYLPSHLKRCFAYCSIFPKDYPLDRKKLVLLWMAEGFLDYYQGGKEMEELGDDCFAELLSRSLIQQSNDDARGKIFLMHDLVNDLATVVSGKSCCRLECGDVSENVRHISYNQEYYDIFKKFENVYNLKLLRSFLSITSMYPYNHISIKVVDDFLPTLKRLRVLSLSKYTNITKLPDTIGNLLQLRYLDLSSTGIESLPDTTCNLYNLQTLILSSCERLTELPVHMGNLINLRHLDITDTNIKELPVEIARLENLQTLTVFVVGKQHVGLSIKELSKFTNLQGKLTIKDLHNVIDSREAEDANLKSKEKIEELELLWGKQSEDSQKVKAVCAMLQPPINLKSLNIGLYGGTSFPSWLGNSSFSNLVSLSINNCEHCMTLPPLGQLPFLKDLKIHGMKILETIGPEFFCAQGGECSNSSFQPFPSLEYIKFDNMPNWKEWLDFDGMNFAFPQLRIMVLHNCPELRGQLPSHLPRIEEIVIKGCAHLLETPSSLHWLPSIKKIKINGLVERTQLSLLESDSPCMMQDVEIEECVTLLYLPKLILRSTCLQHLKLSSLSALTAFPSSGLPTSLQSLVIQNCENLSFLPPETWSNYTSLVSLKLWSSCDALTSFPLDGFPALQTLVIYESKSLDSIYILESPSRQPSNLQSLNITSLCSLKVKVKMDTLTGLTDLLLRCEGELSFSEGICLPPKLQSIDLLSRGIRTTLPVMEWGLTGLSRLNIGGCDDIIKTLMKESLLPISLVSLTIFDNKMKAFDVSGLRHLSSLEILTFNYCEELESLPENCLPSSLKSLEFWCCSRLESLPENCLPSSLKSLEFWCCSRLESLPENCLPSSLKSLRFSRCSILESLPENCLPSSLKSLYFWNCPRLESLPGNCLPSSLKSLEFCFCDKLESLPEDNLPDSLRKLYIYKCPLLEERYKRKEHWSKIAHIPVIKINDQTKWMNISSHDELKTKVRHVVIVLILLVNLF* 1384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4584 1383 Gene3D - 415 504 IPR036388 -
Tpr3g4584 1383 Gene3D Ribonuclease Inhibitor 514 928 IPR032675 -
Tpr3g4584 1383 Coils Coil 41 61 - -
Tpr3g4584 1383 SUPERFAMILY L domain-like 1023 1331 - -
Tpr3g4584 1383 SMART LRR_typ_2 645 668 IPR003591 -
Tpr3g4584 1383 SMART LRR_typ_2 598 621 IPR003591 -
Tpr3g4584 1383 PANTHER DISEASE RESISTANCE PROTEIN RP 23 898 IPR044974 GO:0006952
Tpr3g4584 1383 PRINTS Disease resistance protein signature 197 212 - -
Tpr3g4584 1383 PRINTS Disease resistance protein signature 270 284 - -
Tpr3g4584 1383 PRINTS Disease resistance protein signature 369 383 - -
Tpr3g4584 1383 PRINTS Disease resistance protein signature 619 635 - -
Tpr3g4584 1383 Pfam Rx N-terminal domain 10 102 IPR041118 -
Tpr3g4584 1383 Gene3D - 330 414 IPR042197 -
Tpr3g4584 1383 Coils Coil 712 732 - -
Tpr3g4584 1383 PANTHER OS05G0414200 PROTEIN 23 898 - -
Tpr3g4584 1383 Pfam NB-ARC domain 179 397 IPR002182 GO:0043531
Tpr3g4584 1383 Gene3D - 14 131 - -
Tpr3g4584 1383 SUPERFAMILY L domain-like 494 924 - -
Tpr3g4584 1383 Pfam FNIP Repeat 1217 1256 IPR008615 -
Tpr3g4584 1383 Pfam FNIP Repeat 1263 1300 IPR008615 -
Tpr3g4584 1383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 430 IPR027417 -
Tpr3g4584 1383 Gene3D - 151 323 IPR027417 -
Tpr3g4584 1383 SUPERFAMILY L domain-like 947 1068 - -
Tpr3g4584 1383 Gene3D Ribonuclease Inhibitor 936 1075 IPR032675 -
Tpr3g4584 1383 Gene3D Ribonuclease Inhibitor 1246 1343 IPR032675 -
Tpr3g4584 1383 Gene3D Ribonuclease Inhibitor 1076 1245 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4584 Tpr-Chr3 50960534 50965886 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4584 194 818 WRKY Transcription Factor Family AT5G45050 22.845 2.20e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4584 - - mtr:MTR_3g032370 1917.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4584 3 50960534 50965886 Tpr3g4584 3 50960534 50965886 ECH