Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4567 ATGGATGTAATTTATATAGGATGGTTTGGTCTAGTAATTGGGTTTGTGTTATGGTGGTGGAATGAGTATTGGTATGTTGTTCCTCTCAAGTTTAAATGCTCAAAATCAGCTACAAAATTGCCACCAGGTCACTTGGGATTCCCTTTCATTGGAGAAATGATTCTTTTTCTTTGGTATTTCAAAATTGTTCGACGTCCAGATGATTTCATTAATTCTAAGAGACGCAAATATGGAGATGGAGTAGGCATGTTTAGGACACACCTCTTTGGAAAGCCATCTATCATAGTATACACTCCGGCTGTTAACAAATTTGTGCTATTCTCAGACACCAACTTCAAACTAGAATGGCCTAGTGTTGAACTTTTGGGCCAAACTTCAATAGCGGCCGTCCATGGGAAGGCCCATACAAGGGTCCGCAACTGTATCACCAATGCCATTAATCGTCCTGATGCCCTAACCCGCATTGCTGCTCTTGTCCAACCTCGACAAGTCGCTGCTCTTCGATCTTGGGCACAAATGGGTAAAATCAATGCCAAGGTTGAAACCGAAAAGCTAACCCTTGAGAACATTGGGAAATTATTCTTGGGCAAGGAGTCAGGCCCTTTTATAAATTCTTTGGATAAGCTCTATCAAGGTGTGCTTCCTGGAGTGAGAGCCTATCCAATTAACTTTCCTGGTTTTGCATACCATCATGCTCTTAAGTGTAGAAGAAAGCTTGAGGACATTTTTTTGATGGAGTTAGATAAGAGAAAGAATAATGAAAATAATGTGGAAACATTAATAGATCTAATGGACGGGTTGATACAAATTGAAGATAGTGATGGTGACAAATTAAGTGACAAAGAAGTTATAGACAATATTGTCTCTCTAGTGTTTGGTGGATATATCTCTACATCTGTTGTATCAATGTGGGCTATTTACCTTCTTGCCAAGAATCCAATTGTGCTACAAAAGCTAAGGGAAGAGAACATGGCTTTCCAAAAGGGAAGTCCAGAGGATTTTATTACAACTAAAGATGTTTCAAATTTAAAATACACAAACAAGGTCGTTGAAGAAGTTATAAGAATAACTAATGTTACACCTTTTATTTTCAGAAAAGCCGTAAATGAAGTCGACTATAAAGGTTATAAGATACCAAAGGGATGGAATGTAATTCTCCTCATTCGTTATATTCATACAAATCCAGAGAACTATAAAGATCCTCTATATTTCAATCCTGATAGATGGAATGAGCCAGCAAAGCCGGGAACATACCAAGTGTTTGGTGGCGGACAAAGACTATGCCCTGGAAACATGCTTGCAAGAATTCAACTAACACTTATGCTTCATCATTTGTCCATAGGATACAAGTGGGAGCTCATTAATCCGAACGCAAATATAATTTATCTTTCGCATCCTTCTCCTATTGACGGGGTCGAGGTCAAGTTCAGCAAATTGTGA 1440 0.3868 MDVIYIGWFGLVIGFVLWWWNEYWYVVPLKFKCSKSATKLPPGHLGFPFIGEMILFLWYFKIVRRPDDFINSKRRKYGDGVGMFRTHLFGKPSIIVYTPAVNKFVLFSDTNFKLEWPSVELLGQTSIAAVHGKAHTRVRNCITNAINRPDALTRIAALVQPRQVAALRSWAQMGKINAKVETEKLTLENIGKLFLGKESGPFINSLDKLYQGVLPGVRAYPINFPGFAYHHALKCRRKLEDIFLMELDKRKNNENNVETLIDLMDGLIQIEDSDGDKLSDKEVIDNIVSLVFGGYISTSVVSMWAIYLLAKNPIVLQKLREENMAFQKGSPEDFITTKDVSNLKYTNKVVEEVIRITNVTPFIFRKAVNEVDYKGYKIPKGWNVILLIRYIHTNPENYKDPLYFNPDRWNEPAKPGTYQVFGGGQRLCPGNMLARIQLTLMLHHLSIGYKWELINPNANIIYLSHPSPIDGVEVKFSKL* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4567 479 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 12 472 - -
Tpr3g4567 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Tpr3g4567 479 PANTHER CYTOCHROME P450 26 12 472 - -
Tpr3g4567 479 Pfam Cytochrome P450 41 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4567 479 Gene3D Cytochrome P450 30 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4567 479 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4567 479 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4567 479 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4567 479 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4567 479 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4567 479 PRINTS E-class P450 group I signature 302 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4567 479 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4567 479 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4567 479 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4567 479 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g4567 479 SUPERFAMILY Cytochrome P450 36 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4567 Tpr-Chr3 50757114 50760411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4567 8 478 Cytochrome P450 AT2G32440 35.491 4.96e-98 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4567 - - mtr:MTR_0045s0060 808.905