Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4539 ATGGTTACCATTAAAAATTCTTACACTGTGATTCCAGAAGAACCAACACCCCAAGGCCGTTTATGGCTCTCTGACAAAGATCAAGTAGCAACTCAACATCACACACCCACCATTTACATTTACAAACCAAATCAGAACCAAGAAAATGTCATAGAAACACTGAAAAACTCTCTAAGCAAAATTCTAGTTCACTACTATCCTATAGCTGGTAGATTGTGTTACTCAGATGAAGAAGTTGATAGTTGTAGAGTTGAATTGAATCTCAATGCCAAAGGAGCCATTTTGCTTGAAGCTGAAACCACAAAAACAATTCATGATTATGGTGACTTTTCACCTTCTGATTTAACCAAAGAGCTTATTCCAATAATCGATTACAATCAACCCTTTCAAGAAATGCCACTTCTTGTTGTCCAACTCACAAGTTTCAAAAATAACCAAGGCTTTGCACTTGGTGTTGCCTTTTCCCATTCTTTATCAGATGGCACTGGAGCCGTAAAATTCATCAACTCATGGGCGAAAATAGCACGTGGCGAAACCTTAGAGCCTAATGAATTACCTTTTCTTGATAGAACATTAATCAAATTTTCACACACACCCTCGAAAGTACCACGTTTCGAGCACATCGAATTGAAGCCTCTTCCACTCATTATAGGAAGAAAAGACACAAGTGAAGAAAGAAAGAAGAAAACAACAGCAACATTATTGAAACTCTCATATGATCAAGTTGAGAAGTTAAAGAAAAAAGCCAATGATTTTTTATCAATGAAGAAAAAAGGTTCAAGGCCTTTTAGTAAATTTGAAGCAATTGGTGCACATCTATGGAGATGTGCATCTAAGGCGCGCGGGCTTGAAGACGATCAAGAAAGCGTTGTTCGTTTTCATGCTGATATTAGAAGAAGAATTAATCCACCACTTCCTCAAAACTTTTTTGCTAATGCTTTGGCATTAACTGCAACAAAAGGATGTGTTGGAGAAATCACATCAAAGCCTTTAGGCTATGTAGCACAAAAGATAAGGGAAGGAACTGAGTTAGTTAAAGATGATTTTATAAAGTCACAAATTGATGTTATTAGAAGTTTTAGAAAGATGGATGATGCAATGAAATTGTTTCTTGGTGATGAAACTGAAAAAGCACCATATTTTGGAAATCCAAATTTTCAAGTAGCTAGTTGGACAGGAATGCCCTTTTATGAAGCTGATTTTGGATATGGGAAGCCTATTTACTTTGGTTATGCTGGTGTGTCTCCACATGATAGGGCATACATTACTCTTAGTCCTGATGGAGATGGTTCTGTTATTGTGTCTTTGCATTTTCAGATGGCACATTTGGAGCTTTTCAAAAAGTACTTCTATGAGGATATATGA 1365 0.3663 MVTIKNSYTVIPEEPTPQGRLWLSDKDQVATQHHTPTIYIYKPNQNQENVIETLKNSLSKILVHYYPIAGRLCYSDEEVDSCRVELNLNAKGAILLEAETTKTIHDYGDFSPSDLTKELIPIIDYNQPFQEMPLLVVQLTSFKNNQGFALGVAFSHSLSDGTGAVKFINSWAKIARGETLEPNELPFLDRTLIKFSHTPSKVPRFEHIELKPLPLIIGRKDTSEERKKKTTATLLKLSYDQVEKLKKKANDFLSMKKKGSRPFSKFEAIGAHLWRCASKARGLEDDQESVVRFHADIRRRINPPLPQNFFANALALTATKGCVGEITSKPLGYVAQKIREGTELVKDDFIKSQIDVIRSFRKMDDAMKLFLGDETEKAPYFGNPNFQVASWTGMPFYEADFGYGKPIYFGYAGVSPHDRAYITLSPDGDGSVIVSLHFQMAHLELFKKYFYEDI* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4539 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 454 - -
Tpr3g4539 454 Gene3D - 1 212 IPR023213 -
Tpr3g4539 454 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 454 - -
Tpr3g4539 454 Pfam Transferase family 1 452 - -
Tpr3g4539 454 Gene3D - 218 453 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4539 Tpr-Chr3 50551307 50552982 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4539 2 452 Monolignol Biosynthesis Gene Families AT5G48930 34.879 3.24e-93 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4539 K13065 - gmx:100778626 541.191