Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4525 ATGGCTTTGTTCAGCCGAGTCAAATCAGGGATCTCTCTCTGCAACAAATTAGGGCTTCTCTCTTCTCAGAGATCCACTCTTCAAAGCTCTCTCATTGCTCCTTCCATTTCCCAGGCCTCAAGAAATTTTGCTGATGTGCCGGGGCAAAGGGACCCCAAAATTAAGGTCCCCATCGCTATGTTTGGAGGTTCAGGAAACTATGCCTCTGCTTTGTATATTGCAGCAGTGAAAGCTAATGCAATTGAAAAGGTTGATGCCGAGCTTTCTCAATTCGTTGAGTCGGTAAAGAATAGTCCCTTAATTTCACAGTTTATAAAGGATATATCTGTGAAAAAGGATGTCAGAGTAAAAACCATCCAGGAAATTGCCAGCGAAGCTAAGTTTTCTGATGTTACAAAGAGCTTTCTTGTTCTCCTTGCTGAGAATGGGAGGCTTAAATACGTAGACACCATTGCAAAGAGGTTTGCGGAGTTGGCAATGGCATATAAGGGAGAAGTGAAAGCAATTGTGACCACTGTCCTTCCTCTTCCTGCTGAAGAAGAGAACGCATTGAAGCAAACTATCCAGGAAATGTTAGGGGCTGGGAAAACAGTTAAGCTTGAACAGAAGATTGATCCAAGCATCCTTGGTGGTCTTGTGCTGGAATTCAACCAAAAGCTCTTTGACATGTCCATAAGGACTAGGGCGCAACAGATGGAGAGGAGCCTCCGAGAACCGGTAAACATTTCCATCTAG 735 0.4408 MALFSRVKSGISLCNKLGLLSSQRSTLQSSLIAPSISQASRNFADVPGQRDPKIKVPIAMFGGSGNYASALYIAAVKANAIEKVDAELSQFVESVKNSPLISQFIKDISVKKDVRVKTIQEIASEAKFSDVTKSFLVLLAENGRLKYVDTIAKRFAELAMAYKGEVKAIVTTVLPLPAEEENALKQTIQEMLGAGKTVKLEQKIDPSILGGLVLEFNQKLFDMSIRTRAQQMERSLREPVNISI* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4525 244 Pfam ATP synthase delta (OSCP) subunit 65 236 IPR000711 GO:0015986|GO:0046933
Tpr3g4525 244 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 198 217 IPR020781 GO:0015986|GO:0016020|GO:0046933
Tpr3g4525 244 Gene3D - 64 156 IPR026015 -
Tpr3g4525 244 PANTHER ATP SYNTHASE DELTA CHAIN 32 238 IPR000711 GO:0015986|GO:0046933
Tpr3g4525 244 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 66 236 IPR000711 GO:0015986|GO:0046933
Tpr3g4525 244 Hamap ATP synthase subunit delta [atpD]. 59 238 IPR000711 GO:0015986|GO:0046933
Tpr3g4525 244 PANTHER ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL 32 238 - -
Tpr3g4525 244 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 64 164 IPR026015 -
Tpr3g4525 244 PRINTS ATP synthase delta subunit signature 63 82 IPR000711 GO:0015986|GO:0046933
Tpr3g4525 244 PRINTS ATP synthase delta subunit signature 133 144 IPR000711 GO:0015986|GO:0046933
Tpr3g4525 244 PRINTS ATP synthase delta subunit signature 144 158 IPR000711 GO:0015986|GO:0046933
Tpr3g4525 244 PRINTS ATP synthase delta subunit signature 196 211 IPR000711 GO:0015986|GO:0046933
Tpr3g4525 244 PRINTS ATP synthase delta subunit signature 211 229 IPR000711 GO:0015986|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4525 103 243 Primary Pumps ATPases AT5G13450 57.447 1.66e-55 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4525 K02137 - gmx:100790990 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4525 3 50395620 50401822 Tpr3g4525 3 50395620 50401822 ECH