Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4522 ATGGTTGATCAGGTTCAGCAACCTACAATCATGGAGAAGGTCACTGGCCAACTCCATCGTCGATCTGGTCTTTCATCTGGTATTAGGGGTTATGATGCCACCTACCGCAATCCTGCCGTGTTCCAAAAGTACTCCTATGGAAATTACTCAAATGCAGCATTTCAGAATCCATGCAGGGCCACTGTTGATTTATCTGCAGTTGCAACAACCGCTTCACCTGTCTTTGTTGCTGCCCCTGCTGAAAAGAGCCACTTTCTTATTGACTTTCTCATGGGTGGTGTTTCTGCTGCAGTTTCCAAAACTGCTGCTGCTCCCATTGAACGTGTTAAGCTTTTGATCCAAAACCAGGACGAGATGATCAAAACTGGCAGGCTTTCTGAGCCCTACAAGGGTATTGGCGATTGTTTCAAAAGAACAACAGCTGATGAGGGTTTGGTTGCTCTTTGGAGAGGAAACACTGCCAATGTGATCCGTTATTTCCCCACTCAGGCTTTGAACTTTGCATTCAAAGATTACTTCAAGAGGCTTTTCAATTACAAGAAGGACAGAGATGGTTACTGGAAATGGTTTGCTGGCAACTTGGCATCTGGAGGTGCTGCTGGTGCTTCATCCCTCCTGTTTGTTTACTCTCTTGATTATGCCCGTACTCGTCTTGCCAATGATGCTAAGGCAGCTAAGAAAGGAGGAGAAAGGCAGTTCAATGGTCTTATTGATGTCTACAAGAAGACTTTGGCAACTGATGGAGTTGCTGGGCTTTACCGTGGTTTCAACATCTCCTGTGTTGGAATCATTGTGTACCGTGGTCTTTATTTTGGATTATACGATTCCCTCAAACCAGTTCTTTTGACTGGAAAGTTGCAGGATAGCTTTTTCGCCAGCTTTGGGCTTGGATGGCTCATCACCAATGGTGCTGGTCTAGCATCATACCCAATTGACACTGTCAGGAGAAGAATGATGATGACATCTGGAGAAGCTGTCAAGTACAAGAGCTCCTTGGATGCATTCAAACAAATCCTCAAGAACGAGGGTGCCAAGTCATTGTTCAAGGGAGCTGGTGCTAACATCCTCCGTGCCGTTGCTGGTGCTGGTGTGCTCGCTGGTTATGACAAGTTGCAGGTTATTGTGTTCGGCAAGAAATATGGATCTGGTGGTGCCTAA 1158 0.4594 MVDQVQQPTIMEKVTGQLHRRSGLSSGIRGYDATYRNPAVFQKYSYGNYSNAAFQNPCRATVDLSAVATTASPVFVAAPAEKSHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKTGRLSEPYKGIGDCFKRTTADEGLVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNYKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLATDGVAGLYRGFNISCVGIIVYRGLYFGLYDSLKPVLLTGKLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA* 386
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4522 385 PRINTS Mitochondrial carrier protein signature 88 101 IPR002067 GO:0055085
Tpr3g4522 385 PRINTS Mitochondrial carrier protein signature 101 115 IPR002067 GO:0055085
Tpr3g4522 385 PRINTS Mitochondrial carrier protein signature 151 171 IPR002067 GO:0055085
Tpr3g4522 385 PRINTS Mitochondrial carrier protein signature 203 221 IPR002067 GO:0055085
Tpr3g4522 385 PRINTS Mitochondrial carrier protein signature 253 271 IPR002067 GO:0055085
Tpr3g4522 385 PRINTS Mitochondrial carrier protein signature 297 319 IPR002067 GO:0055085
Tpr3g4522 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 188 280 IPR018108 -
Tpr3g4522 385 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 385 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tpr3g4522 385 PRINTS Adenine nucleotide translocator signature 85 97 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tpr3g4522 385 PRINTS Adenine nucleotide translocator signature 129 150 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tpr3g4522 385 PRINTS Adenine nucleotide translocator signature 162 174 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tpr3g4522 385 PRINTS Adenine nucleotide translocator signature 188 201 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tpr3g4522 385 PRINTS Adenine nucleotide translocator signature 293 309 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tpr3g4522 385 SUPERFAMILY Mitochondrial carrier 83 370 IPR023395 -
Tpr3g4522 385 Gene3D Mitochondrial carrier domain 86 381 IPR023395 -
Tpr3g4522 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 83 176 IPR018108 -
Tpr3g4522 385 Pfam Mitochondrial carrier protein 289 374 IPR018108 -
Tpr3g4522 385 Pfam Mitochondrial carrier protein 187 283 IPR018108 -
Tpr3g4522 385 Pfam Mitochondrial carrier protein 83 180 IPR018108 -
Tpr3g4522 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 288 374 IPR018108 -
Tpr3g4522 385 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 385 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr3g4522 Tpr-Chr3 50362595 50365594 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4522 1 385 Antiporters AT5G13490 82.005 0.0 611
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4522 K05863 - gmx:100789942 681.404
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4522 3 50362595 50365594 Tpr7g1707 7 19514940 19518020 ECH
Tpr3g4522 3 50362595 50365594 Tpr3g4522 3 50362595 50365594 ECH