Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4518 ATGTCCACCCCACCTTTCACATTGAAGGTTCTTGAGCATTGCAAAGTCACTCCCCAACTCAACACAATTTCAACAATCTCTTCCCTCCCACTAACATTCTTGGACATTCCTTGGCTTCTCTTCTCTCCAAGCCAACCTCTATTTTTCTATGACTTCCCTCACTCAATTTCTTATTTCACAACCACCATTGTCCCAAAACTTAAAGAATCACTTTCCCTCACACTTCAACATTACTTCCCATTTGCCGGTACTTTCGTTCCATCACTCGATGTAACCGAGCCATGCCTTAAATTTACTCTTAACAACTCAGTTTCATTCATAGTCGCAGAGTCAAATAGCGAATTTAAACACTTATGCTCTAATCACTCAAGAGATGTCAATGAATTCCATCCATTGGTACCAAATTTGCAACAAATAAATTCATTTGAAGTAAAAGAGTTTCCTTTGTTAGCTATTCAAATAACATCATTCCCGAATTCCGGCTTTTCTATTGGCCTAGCATTTCATCATGTTGTTGCCGATGGAAGAACCATCCATAATTTCATCAAAACATGGTCATATTGTTCGTCTTCTATCTCTGAAGCCTCTTCATCACTAAAATCGTTACCCTTTTACGATCGAAGAGTGATTATCGATCCAAAAGGACTTCGTGAAGTTTTCTTGAAAGATTGGAGAAAGAGAAGACTTGTACTCAATGAAAAAGTTAGAAAAGAAGTCAAAGTAGATTTGGCAAACATGACTAGAGCTACATTCATAATGAGTGCAAGTCAAATGGAGAAAATAAAAAACTTTATTATTGAATCTTGCAAAGAAAAGAAAAAGTCTCAACCTTTGCATTTATCTTCTTATGTGTTAACAAGTGCTTTCTTTTGGGTTTGTTATCTCAAAACTCAACAAGAGTTTGTGAATGAAAATGTGATTCATGAAGATGTTACACACTTTGGATTCATTGCTGGTGGAATAACAAGGTTAGATTTTGAAGTACCAAAAAATTATTTTGGTAATTGTGTTGGATTTGGAAAGGTATCATTGAGAAGAAATGATTTACTAGGAGAAGATGGTGTTGTTATTGCAGCTAAAGAAATTGGAAGCACAATTAAGAAACTTGATGCATCAATTTTGGGAGAGGGTGAGAAGTGGATTTTGGATTGGGAAATGTTACATGGGTCAGAGGAACATGTTCATATAACATGGTCACCAAAATTGAAGCTTTATGAGTTGAATTTTGGATGGGGGAAGCCTAAGAAAATAGAGGAGATTTCAATTGATTTTACAAGAGGTGTTTCTTTTTTAGAGAGTAGAGATTTTGAAGGTGGAATTGAGATAGGGTTAGCTTTGACTGAGAGTAAAATGGATGTTTTTGCCTTTTTGTTTAACAAAGGACTTGAGGCTCTACCATGA 1401 0.359 MSTPPFTLKVLEHCKVTPQLNTISTISSLPLTFLDIPWLLFSPSQPLFFYDFPHSISYFTTTIVPKLKESLSLTLQHYFPFAGTFVPSLDVTEPCLKFTLNNSVSFIVAESNSEFKHLCSNHSRDVNEFHPLVPNLQQINSFEVKEFPLLAIQITSFPNSGFSIGLAFHHVVADGRTIHNFIKTWSYCSSSISEASSSLKSLPFYDRRVIIDPKGLREVFLKDWRKRRLVLNEKVRKEVKVDLANMTRATFIMSASQMEKIKNFIIESCKEKKKSQPLHLSSYVLTSAFFWVCYLKTQQEFVNENVIHEDVTHFGFIAGGITRLDFEVPKNYFGNCVGFGKVSLRRNDLLGEDGVVIAAKEIGSTIKKLDASILGEGEKWILDWEMLHGSEEHVHITWSPKLKLYELNFGWGKPKKIEEISIDFTRGVSFLESRDFEGGIEIGLALTESKMDVFAFLFNKGLEALP* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4518 466 PANTHER - 1 464 - -
Tpr3g4518 466 Gene3D - 6 238 IPR023213 -
Tpr3g4518 466 Pfam Transferase family 14 454 - -
Tpr3g4518 466 Gene3D - 243 465 IPR023213 -
Tpr3g4518 466 PANTHER MALONYL-COENZYME A:ANTHOCYANIN 3-O-GLUCOSIDE-6''-O-MALONYLTRANSFERASE-LIKE 1 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4518 Tpr-Chr3 50323465 50325270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4518 47 458 Monolignol Biosynthesis Gene Families AT5G48930 24.769 1.33e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4518 - - gmx:100817166 592.038