Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4486 ATGTGGAAATTTAAGCCGTTCACACACAAAGAGCAAAGTGGTCTTGAAGGCCGGTCTATAGATGTTGGAAATCTTAAAATAAATGTCCATAAGGTCATCGCTGAAGGAGGGTTCTCATGTGTCTACTTGGCTCGTGATGCTGTACATACGTCTAAACAGTATGCTTTGAAGCACATAATATGCAATGATGAAGAATCACTTGGATTGGTGAAGAGGGAGATATCTGTGATGAAGTTGCTGATAGGACATCCCAATGTGGTCAAACTTCATGCTCATGCGATCTATGATATGGGTAGGACAAAAGAGGCATTCCTTGTAATGGAATTTTGTGAGAAGTCTCTGGTTAGTGTGCTGGAGAGCCGAGGAGCTGGTTATTTTGACGAGAAACAGGTTCTTTTAATATTCAGGGATGTGTGTAATGCAGTCTTCGCTATGCACTGCCAGTCCCCACCTATTGCTCACCGAGACTTGAAGGCAGAGAATCTTTTGTTAAATTCAGATGGTTTATGGAAGTTGTGTGATTTTGGAAGCATTTCCACCAATCACAAACGTTTTGAGAAGCCAGAAGAAATGGGAATTGAGGAAGATAATATCAGAAAGTACACAACCCCCGCCTACAGAGCTCCTGAGATGTGGGATCTGTTTCTGAAAGAAGTAATTAATGAGAAAGTGGACATATGGGCACTTGGCTGTCTCCTTTTTCGCATATGCTACTTCAAAAGTGCATTTGATGGGGAATCAAAGCTCCAAGTCTTAAATGGAAACTACCGCATTCCGGATTTACCTAAATTCAGTTCAACCCTCACAGACTTGATCAGAGACATGCTTCAAGCTAGACCAGATGACCGACCAGATATCACGCAGGTTTGGTTTCGTGTTAATGAGCAGCTACCTATTGATTTACAAAAGTCATTACCTGACAGGCCACCCGAATCACCCTCCTCCAACAATCACGAAGGTGCTACAATGTCTACACACAAATCAAGTCCAATGCCTCGCAGAAATGCACCTCCTCCTCCATCAGTTGTTGAACCCAAAACTACCCCTCAGCCATCTCTTGCTCCTAGGGGAGGGGAAAGTGGTGGTCAACTTGGTGCTTTCTGGTCCACTATGCATGCAAAGGATTCACTTGTCCCTGAGGAAAAGGGAAAACCTATATATGATGAAGAACGATCTAGTCACCATATTTCATCAAAACCTGAAAGAGTTCGTCCGGACAATGATCATGCAAGTCAGAGACATATGTCAAATCTGGAGAAGAAGAATGATAACTTCCAAGACCAGACTTTTAACACTTTTGTTGCAGAATTTGATACTACTAAGCTAAACTCCGGGCATGGTAACACATCCACAAGGGAAGAAGCATTAGAGTCTGAGTTGGAGAAACTCAAAGAGCAGCTGAAGGAAACTAATTTAGAGAAATCTGAAATAACTGCCAAGTATGAAAAGCTTACTGCTATCTGCCGTTCACAAAGGCAAGAATTGCAGGATCTCAAGCAAGCACTTGCAGCAAGAACTCCATCTCCAAATAGAGAGATTTTGAGAACCTCACCTGGAGTTGCATCACCTGCGTCTTTGGATAGAAGTGAATGGAAAACTCCTAGTTCAGAACCAAAGTCATCATGGCAAGCTTTCCCAGATGCAACTGAATCGTTGAAATCCCTTTCAGCAGACAATTCTTCAAAATCTGTTAGGTCAAGAAATGGTCAGCAGAACAAGCAGGCTACTCAACCAGCTTCTGATTTTGATTCTTGGGGTTTTGGCACAGATACATTTAGTGCTGCTCGTGCTGGTAGTGGTAGCCAACAGATGCCAAGACCTGGTGAAGGGAGTAAAGCTCATGTTTTTGGTGAAGCAAAGGTTTTTGAGAGCAAGTCAAATTCTCAACCTGCTGGATGGGCTGGTTTTTAA 1911 0.4286 MWKFKPFTHKEQSGLEGRSIDVGNLKINVHKVIAEGGFSCVYLARDAVHTSKQYALKHIICNDEESLGLVKREISVMKLLIGHPNVVKLHAHAIYDMGRTKEAFLVMEFCEKSLVSVLESRGAGYFDEKQVLLIFRDVCNAVFAMHCQSPPIAHRDLKAENLLLNSDGLWKLCDFGSISTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLKEVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKFSSTLTDLIRDMLQARPDDRPDITQVWFRVNEQLPIDLQKSLPDRPPESPSSNNHEGATMSTHKSSPMPRRNAPPPPSVVEPKTTPQPSLAPRGGESGGQLGAFWSTMHAKDSLVPEEKGKPIYDEERSSHHISSKPERVRPDNDHASQRHMSNLEKKNDNFQDQTFNTFVAEFDTTKLNSGHGNTSTREEALESELEKLKEQLKETNLEKSEITAKYEKLTAICRSQRQELQDLKQALAARTPSPNREILRTSPGVASPASLDRSEWKTPSSEPKSSWQAFPDATESLKSLSADNSSKSVRSRNGQQNKQATQPASDFDSWGFGTDTFSAARAGSGSQQMPRPGEGSKAHVFGEAKVFESKSNSQPAGWAGF* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4486 636 CDD STKc_GAK_like 26 298 - -
Tpr3g4486 636 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4486 636 PANTHER SERINE/THREONINE PROTEIN KINASE 1 626 - -
Tpr3g4486 636 MobiDBLite consensus disorder prediction 622 636 - -
Tpr3g4486 636 MobiDBLite consensus disorder prediction 376 412 - -
Tpr3g4486 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Tpr3g4486 636 MobiDBLite consensus disorder prediction 502 636 - -
Tpr3g4486 636 MobiDBLite consensus disorder prediction 301 359 - -
Tpr3g4486 636 Gene3D Transferase(Phosphotransferase) domain 1 9 306 - -
Tpr3g4486 636 Coils Coil 446 501 - -
Tpr3g4486 636 SUPERFAMILY Protein kinase-like (PK-like) 28 339 IPR011009 -
Tpr3g4486 636 PANTHER NUMB-ASSOCIATED KINASE, ISOFORM A 1 626 - -
Tpr3g4486 636 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4486 636 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4486 636 MobiDBLite consensus disorder prediction 528 587 - -
Tpr3g4486 636 MobiDBLite consensus disorder prediction 308 331 - -
Tpr3g4486 636 MobiDBLite consensus disorder prediction 332 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4486 Tpr-Chr3 49988869 49993493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4486 26 292 Miscellaneous Gene Families AT2G34180 30.605 8.38e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Tpr3g4486 Pkinase 6.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4486 K08853 - gmx:100808507 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4486 3 49988869 49993493 Tpr3g4486 3 49988869 49993493 ECH