Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4484 ATGGAAATTCTATCTTCTATTGTTGGAATAGTAGCAGAACATACTGTTGTGCCTATTGGACGTCAAGCAAGTTACTTGATATTCTACAAAGGCAATTTCAGTATGTTATCAGTTCATGTTAAAGACCTTGAGGCTGCAAAAGAAAGAATAACCCATTCGGTTGAAGAAGAAAAGAGAAATGGTAAAAAGATTGAAACAGATGTGATGAACTGGTTAGAGAAAGTGGATGAGGTCATTGAAAAGGCAAATCAGCTTCAAAAGGATCCTCTTCGTGCCAACGCTAGGTGCTCAGCATGGTCGTTCCCCAATTTGATTTTGCGTCATCAACTAAGTAGGAAGGCCACAAAAATTGTAAAAGATGTTAATGAAGTTCAAGAAAAAGGGAAGTTTGATCGAATTGGTTACCTTCCCACCCTAGATGGAGAAGCCTCCTCCTCCTCAACAAGAGGTGGTGAAAATTATGAGACAAGGGAATCACTTAAAGAGAACATTATGAAGGCACTAACACACCAAAATTCATGCAACATTGGGGTCTATGGGTTGGGTGGGGTGGGTAAAACCACACTGCTGCAGGAAGTTTTTGAAATATCTAAGCAACACAAATTGTTTGATACAATTGTTACAACGAATGTAACAAAAGATCCAGACATTAAAACAATTCAAGGGGAGATTGCAGATTTGTTGGGTCTACGATTCGATGAGGAGACTATTCTTGGCAGAGCACATCGCCTGAGAAAAAGAATCATGATGGAAAAAAATATCCTTGTCATTCTAGATGATATATGGACCAAACTTGATTTGAAGAAAGTTGGAATTCCATTTGGCAATGAACATAATGGTTGTAAATTGTTGATGACATCCAGAAATCAAGATGTGTTGCTTCAAATGGATGTTCCAAAGGATTTAACTTTCAAACTTGAACTTATGAGTGAAAACGAGACATGGAGCTTGTTTCAATTTATGGCTGGGGATGTGATTAAAGATAGCAATTTGAAAGGTGTAGCAATTCAAGTTGCCAAAAAATGTGAAGGTTTGCCTCTTGTGGTAGTGGCGGTTGCTCGAGCATTGAAAGATAAGAGGGATGTTCAATCTTGGAAAGATGCATTAAGGAGATTACAAAGTGGTCATCATACAATTTTTTCTGCTTTGGAATTGAGTTACGACTCATTGGAGAGTGATGAAATGAGGGATGTCTTCTTGCTTTTTGCATTATTTCAAAGTCAAATGGTAGATTACTTTCTTAAAGTTGCAATGGGTTTGGATATATTAAAGGATGTTAAGACTGTGGATGATGCTAGAAACAGACTTAATCCAATAATCCATTCTTTGGAGGCATCTTGTTTGATTGATATTAAAACAAGTGGAAAAATCCAAATGCATGACTTTGTTCGGGATTTTGCTATCTCCATAGCACGTAGGGACAAACATGTATTTCTAAGAAAACAATCAGATGAGGAATGGCCAACCAAGGATTTTTTAACAAGGTGCACACAAGTTGTTCTAGATAGTTGTGTGTCCGAGCTTCCTCAAATGATTGACTGCCCAAACATTAAGTTTTTCTGTTTGAACAGTAAGAATCGTTTTTTAGAAGTCCCTGATTACTTTTTTGAGGGTATGGGAAGCCTTAGAGTCCTAGATTTAACATCTCTGAACTTGTCTTCGTTACCCACTTCATTTCGGTTCCTAACCAACCTTCAAACACTGTGTTTGTATTTTTGCATTTTGGAAAATATGGTTCAAATTAAAGCTTTGCAAAATTTAGAAATTCTTTGCCTTGGGAATTCTTCAATGACTAAGTTGCCAATAGAAATAGGGCAATTGACTCAATTGAGAATGCTTGATTTGAGCAATTCAGGAATAGAAGTAATCCCACCCAACATTATATCAAACTTGACCAAACTGGAGGAGTTGTACATGGGCAATACCTTTGTTGATTGGGAAGATGTGAGTTCAACGGTTCAAAACAAAAATGCTAGCATTGCTGAGCTTCGAAAACTACCCAACTTGACAAGTCTAGAATTACAAATTCGTGAGACTTGGATGTTGCCAAGGGACTTGCAGACGGTGTTTGAGAAGTTGGAACGATATAAAATAACTATTGGTGATGTATGGGAATGGTCTGACATTGTGGATGGAACCTCAAAAACATTGATGCTCAAACTTGGTACTAATATACATTTGGAGCACGGAATTAAAGCATTGATTAAAGGTGTTGAGAATTTGTACTTGGATGTTGTAGACGGAATTCAAAATATGCTTTATCAACTAAACGGAGAAGGATTTCCGTTGTTGAAACATCTCCACATCCAAAATAATGCAAACATGAAGCATATTGTTGACTCACAAGAGAGGAATCAAATGCATGTGTCATTTCCCATGTTGGAAACACTAGTACTTGATAATCTTAAAAACTTGGAGCATATATGTCTTGGTCCACTTTCAATTGCTTCTTTTGGAAGTCTTAGTGCTATCAAAGTCAAAAATTGTGTCCAATTGGGATATCTTCTCTCTTTTGCGTTGGTTAAAGAACTTTCCCACCTTTCTAAGATTGAAGTTTGTCATTGCAATTCTATGAAGGAGATAGTGCTTGGAGACAACAATTCAAGTGCATCAATGGTTTTTCTATTCCGTTCTTTGACTTTAGAACATCTGGAGACACTTCAGAATTTCTTCTCCGGAAATGACCAAAAGCATCAATTGTTAGATCCTTATGTGTCAACACCATTGTTCAATGTTCAGGTTGCATTTCCTAATTTGGATACTCTTAAATTGAGCTCACTCAATTTGAATAAAGTTTGGGATGACGGTCATCATTCTATGTGCAAATTAACTAGCTTGATTGTGGAGAATTGTGGTGGATTGAAGTACTTATTCTCGTCAACTATGGTTGGAAGTTTTAAGAACCTCAAACACCTTGAAATAAGTAATTGTCCTTTGATGGAGGAAATAATAGCCAAAGAAGAGAGAAACAATGAAATAGAAGACGTTCATTTTTTCAAATTAGAGAAAATCACATTGAAGGACATGGACAAGTTGAAGACAATATGGCACCGCCAATTTGAAATAGTGAAAATGTTGCAAGTGAACAATTGTAAGAAACTTGTGGTGGTTTTTCCTTCTTCAATGCAAACAACATATAATAAGCTAGAGATGTTGGAGGTTACAAATTGTGCTTTAGTAGAAGAGATATTTGAATTGAGTTTCAATGAAAATAATAGCAGTGTAGAGAACACAACACATTTGGAAATCATTATAGATGGATTGCCGAAACTGAAAAATATATGGAGTGGGGATTGTGACAAAATTCTTAGTTTTCAAATTCTTATTATTGTAAGACTTAAAAACTGTGCAAGCTTGGAGTATCTATTACCACTTTCTATAGCCACTTGTTGCTCACATCTCCAAGAACTTCATATAAACAAATGTGGAAATATGAAGGAAATTGTTGCAGAAGAGAAGGAGAAAGAATCTGGAGTGAGTGCAGCTCCCACATTTGAGTTTAATCAACTAAGTATTTTATTGCTTTGGGGCTTGCATAAACTCAAGGGTTTCTATGCTAAAGAGCATACCCTATCATGTTCATCTTTGAAGGAAATTGATGTTGTTGATTGTGCAAAGTTGAATTTGTACAGAACTCTATCTACAAGAAGCTCCAATTTTCAAGATGACAAACTCTCCATTTTAACGCCACAACCACTTTTCATTGTCGAAGAGGTGATTCCAAATTTGAAGAAGTTGAGAATAAATCACAAAGAAGCTAACGTGATATTACAAGCCCAAAACACAAGTGCCCTATTCACCAAAATGACATATCTTTGTTTGTCCTTTGATATTATTGAAGATGCTACATTTCCTTATTGGTTTCTTCAAAATGTGCACACTCTTGAGTCACTACTTGTTGAATGGTGTTGCTTCAAGAAAATATTTCAAGATGAAGGACAGATAAGTGAGAAGAAGACTTACCCACAGCTCAAAATGCTCACATTGTATCAATTACATAAGCTTCAACATATATGTGAGGAAGGATTCCAAATTGATCCTGTTCTTGCATTCCTTGAATACTTAGATGTTGATAATTGTTCTAGTTTGTTATGTTTATTGCCTTCCTCCGCCACCCTTAATCATTTGGAATATCTGGAGATAACAAATTGCAACGGGTTAAAAAAATTAATTACATCTCCTACGGCACAAAGTTTGCACAAGCTCATTTCGCTGAAGGTAAAAGACTGTAATTCACTTGAAGAAATAATTACTGGAGAGGAAAATGTTGGCATTGCATTTATTAGTTTAGAATTATTGATGTTGGATTGTTTGCCAAGGCTCACCAAATTTTGTTCTAGCAAGTGCTTCTTGAAGTTTCCAATGTTGAAGGAAGTAATTGTGAGGGAATGTCCTCGCATGAAGATTTTTTCAGAGGGAAACACAAGTACACCAAATCTTCGAAAAGTTAAAATTGCAGAAAATGATGAATGGCTTTGGAAGGGAAACCTAAATGATACAATAACCAACATATTTGAAGATAAGGTTGCATTTCGTAAATTTAACTGTTTAGCCTTATCTGATTACCCTGAGCTAAAAGATTTGTGGTATGGCCAACTTAATCACAATGTGTTTTGCAATCTCAAGTCCCTAGCAGTGCAAAAATGTGATTTTTTATCACATATACTTTTACCATCAAATATAATACAAGCGCTGCATAGATTGGAAGATTTAAAAGTAACAGACTGTGACTCGTTAGAAGCAGTGTTTGATGTGAAAGGTATCAAGTCTAGAGAAATATTGATAAAACAAAGCACTCAGTTGAAAAGTTTGACTCTATCTAGTTTGCCAAAATTGAAGCACATATGGAATGAGGATCCTCATGAAATTATCAGCTTTGGAAACTTATGCAAGGTGGATGTTTCTATGTGCCAAAGCTTGCTATATATCTTTCCATTGTCATTATGCCAAGATCTTGGACATCTCGAAATGCTTCATATAATCTCTTGTGGAGTTGAGGAAATTGTAGAAATGGAAGAAGGATCAATGGAAATCAATTTTAATTTTCCCCAACTGAATCAATTGGTACTTTGTTATTTGACAAACCTTAAGAGCTTCTATCGGGGAAAGTATGTTTTAGAGTGCCCTCCTTCCTTGAAGATTCTTAATGTATATCGTTGTGAAGCATTAAGAATGTTTTTCTTCCAACAGCCTAATGCAGTGGGCAGAAATCCCATCATACCTCAACAAGCTCTATTTTCTATTGAAAAGTTGAGCCCCAACCTGGAGGAATTGGCAATAAATAGCCCGGATGTGATGGAGATATTGAATCAAGAAAATGTCTTTCATAAAGTTGAATTTCTTCGTTTGCAATGCTTTGACGAAACTCCAACTGTTTTTCTGAATGATATCCATACATCATTTCCTAATTTTAAAACATTTCAAGTGCGTAATAGTTCTTTTGAAACATTGTTCCCCACTAAAGAAACCATTGGTCATCTCAGTATGGATATTTCAAAACAAATAAGATGTTTGTATCTTTATGAATTGGAAAATCTCAAGTACATATGGCAGGAAGACTTTCCATTGGATCATCCTCTGCTGCAATATCTTGAACAGTTATCTGCATGGAATTGTCCAAGTTTGATAAGCTTTGTACCATCGTCAACATGTTTCACAAATTTAACATATTTGGAAGTGGACAACTGCAAAGAGCTTATTTATTTAATAACATCCTCAACAGCTAAAAGTCTTGTACAACTCACAACATTAAAAATATTGAATTGTGAGAAGATGTTGGATGTTGTGAAACAGATTGATGATGAAGAGGAAAACATCATATTTGAAAACTTGTATTACTTGGAATTTACTTCTTTGTCAAGTTTTAGAAGCTTCTGCTATGGGAAACAAACATTCATATTCCCATCTTTCTTACGTTTCATTGTTAAAGGGTGCCCTCAAATGAAGATATTCTCATCAGGAGTCACAGTAACACCATACCTGACAGAAATTGAAGTGGAAGAAGGAAACAAGAGATGGAAAGGTGATCTTAATACAACTATTGAACAATTATTCATAGAAAAGGAACTCCCACATTCTAATGTTGAATGA 6090 0.3565 MEILSSIVGIVAEHTVVPIGRQASYLIFYKGNFSMLSVHVKDLEAAKERITHSVEEEKRNGKKIETDVMNWLEKVDEVIEKANQLQKDPLRANARCSAWSFPNLILRHQLSRKATKIVKDVNEVQEKGKFDRIGYLPTLDGEASSSSTRGGENYETRESLKENIMKALTHQNSCNIGVYGLGGVGKTTLLQEVFEISKQHKLFDTIVTTNVTKDPDIKTIQGEIADLLGLRFDEETILGRAHRLRKRIMMEKNILVILDDIWTKLDLKKVGIPFGNEHNGCKLLMTSRNQDVLLQMDVPKDLTFKLELMSENETWSLFQFMAGDVIKDSNLKGVAIQVAKKCEGLPLVVVAVARALKDKRDVQSWKDALRRLQSGHHTIFSALELSYDSLESDEMRDVFLLFALFQSQMVDYFLKVAMGLDILKDVKTVDDARNRLNPIIHSLEASCLIDIKTSGKIQMHDFVRDFAISIARRDKHVFLRKQSDEEWPTKDFLTRCTQVVLDSCVSELPQMIDCPNIKFFCLNSKNRFLEVPDYFFEGMGSLRVLDLTSLNLSSLPTSFRFLTNLQTLCLYFCILENMVQIKALQNLEILCLGNSSMTKLPIEIGQLTQLRMLDLSNSGIEVIPPNIISNLTKLEELYMGNTFVDWEDVSSTVQNKNASIAELRKLPNLTSLELQIRETWMLPRDLQTVFEKLERYKITIGDVWEWSDIVDGTSKTLMLKLGTNIHLEHGIKALIKGVENLYLDVVDGIQNMLYQLNGEGFPLLKHLHIQNNANMKHIVDSQERNQMHVSFPMLETLVLDNLKNLEHICLGPLSIASFGSLSAIKVKNCVQLGYLLSFALVKELSHLSKIEVCHCNSMKEIVLGDNNSSASMVFLFRSLTLEHLETLQNFFSGNDQKHQLLDPYVSTPLFNVQVAFPNLDTLKLSSLNLNKVWDDGHHSMCKLTSLIVENCGGLKYLFSSTMVGSFKNLKHLEISNCPLMEEIIAKEERNNEIEDVHFFKLEKITLKDMDKLKTIWHRQFEIVKMLQVNNCKKLVVVFPSSMQTTYNKLEMLEVTNCALVEEIFELSFNENNSSVENTTHLEIIIDGLPKLKNIWSGDCDKILSFQILIIVRLKNCASLEYLLPLSIATCCSHLQELHINKCGNMKEIVAEEKEKESGVSAAPTFEFNQLSILLLWGLHKLKGFYAKEHTLSCSSLKEIDVVDCAKLNLYRTLSTRSSNFQDDKLSILTPQPLFIVEEVIPNLKKLRINHKEANVILQAQNTSALFTKMTYLCLSFDIIEDATFPYWFLQNVHTLESLLVEWCCFKKIFQDEGQISEKKTYPQLKMLTLYQLHKLQHICEEGFQIDPVLAFLEYLDVDNCSSLLCLLPSSATLNHLEYLEITNCNGLKKLITSPTAQSLHKLISLKVKDCNSLEEIITGEENVGIAFISLELLMLDCLPRLTKFCSSKCFLKFPMLKEVIVRECPRMKIFSEGNTSTPNLRKVKIAENDEWLWKGNLNDTITNIFEDKVAFRKFNCLALSDYPELKDLWYGQLNHNVFCNLKSLAVQKCDFLSHILLPSNIIQALHRLEDLKVTDCDSLEAVFDVKGIKSREILIKQSTQLKSLTLSSLPKLKHIWNEDPHEIISFGNLCKVDVSMCQSLLYIFPLSLCQDLGHLEMLHIISCGVEEIVEMEEGSMEINFNFPQLNQLVLCYLTNLKSFYRGKYVLECPPSLKILNVYRCEALRMFFFQQPNAVGRNPIIPQQALFSIEKLSPNLEELAINSPDVMEILNQENVFHKVEFLRLQCFDETPTVFLNDIHTSFPNFKTFQVRNSSFETLFPTKETIGHLSMDISKQIRCLYLYELENLKYIWQEDFPLDHPLLQYLEQLSAWNCPSLISFVPSSTCFTNLTYLEVDNCKELIYLITSSTAKSLVQLTTLKILNCEKMLDVVKQIDDEEENIIFENLYYLEFTSLSSFRSFCYGKQTFIFPSFLRFIVKGCPQMKIFSSGVTVTPYLTEIEVEEGNKRWKGDLNTTIEQLFIEKELPHSNVE* 2030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4484 2029 Pfam NB-ARC domain 158 388 IPR002182 GO:0043531
Tpr3g4484 2029 SUPERFAMILY RNI-like 1104 1417 - -
Tpr3g4484 2029 PANTHER - 1624 1726 - -
Tpr3g4484 2029 PANTHER - 1104 1254 - -
Tpr3g4484 2029 PANTHER - 1874 2013 - -
Tpr3g4484 2029 PANTHER - 20 1082 - -
Tpr3g4484 2029 PANTHER - 1344 1500 - -
Tpr3g4484 2029 PANTHER - 1504 1594 - -
Tpr3g4484 2029 SUPERFAMILY RNI-like 1597 1924 - -
Tpr3g4484 2029 Coils Coil 68 88 - -
Tpr3g4484 2029 Gene3D Ribonuclease Inhibitor 1422 1724 IPR032675 -
Tpr3g4484 2029 Coils Coil 40 60 - -
Tpr3g4484 2029 PANTHER RPP4C3 1344 1500 - -
Tpr3g4484 2029 PANTHER RPP4C3 1874 2013 - -
Tpr3g4484 2029 PANTHER RPP4C3 1624 1726 - -
Tpr3g4484 2029 PANTHER RPP4C3 1504 1594 - -
Tpr3g4484 2029 PANTHER RPP4C3 20 1082 - -
Tpr3g4484 2029 PANTHER RPP4C3 1104 1254 - -
Tpr3g4484 2029 Gene3D Ribonuclease Inhibitor 489 897 IPR032675 -
Tpr3g4484 2029 Gene3D - 144 302 IPR027417 -
Tpr3g4484 2029 SUPERFAMILY RNI-like 1347 1579 - -
Tpr3g4484 2029 SUPERFAMILY L domain-like 458 1038 - -
Tpr3g4484 2029 SMART LRR_typ_2 584 606 IPR003591 -
Tpr3g4484 2029 SMART LRR_typ_2 539 561 IPR003591 -
Tpr3g4484 2029 SMART LRR_typ_2 607 630 IPR003591 -
Tpr3g4484 2029 PRINTS Disease resistance protein signature 175 190 - -
Tpr3g4484 2029 PRINTS Disease resistance protein signature 248 262 - -
Tpr3g4484 2029 PRINTS Disease resistance protein signature 342 356 - -
Tpr3g4484 2029 PRINTS Disease resistance protein signature 605 621 - -
Tpr3g4484 2029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 401 IPR027417 -
Tpr3g4484 2029 Gene3D Ribonuclease Inhibitor 915 1164 IPR032675 -
Tpr3g4484 2029 Gene3D Ribonuclease Inhibitor 1736 1940 IPR032675 -
Tpr3g4484 2029 Gene3D Ribonuclease Inhibitor 1238 1398 IPR032675 -
Tpr3g4484 2029 Gene3D - 308 391 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4484 Tpr-Chr3 49975888 49984773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4484 176 627 WRKY Transcription Factor Family AT5G45050 23.352 3.31e-14 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4484 - - mtr:MTR_1g037010 2731.82