Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4473 ATGGAGGAAGATCAACACATGGTTGCTGCAGCTCAACACATTCTAAAAGCACTAGCTTCAAGCAAAACTGTTTCTCATGAGATGAGAAAAACTCTCTTGGATCTTGAGATTCAATTGTCTACAATCAATGAAAGAAAGGGAAGTGGAATCAAGCAATTAGAGAGAAAGCTTAAATGTCTTGAAGATAAGGTTGTTATGTTAAGGCTTGAGGAAGAGTTGGTTCAAATTCTTGTTAATCATAAGCAATATTTTGAGGTTGATTACATGTCTTTCAATTCCAATAGAGTGGATTTGGTGTATGATGAATCATTTGGTTCGGTTGAGGATGAACGAATCAACAAGGTGTCGCGGAGTATTGATGATAGCCTATCCGAGGCGAGCAATATAGATTTGGTGAATCCTTCTGTAGTTGAAGATCTCAAAAGCATTGCTAAAGCCATGTTTGGTTCAAATTACCAACATGAGTTTTGTCATGTCTTCATTTCTTCTAGGAGAGATGCCTTGGATGAGTACTTTGTCATTCTAGAAATCGAAAGATTAAGCATCGAAAATATGCTAAAAATGGAGTGGCAAAGTTTGAATCGCATGATAAAGAAATGGATTCGAGCGATGAAGTTCATTGTTCAAGCGTATCTTGTTGGCGAGAAACGATTGTGTAAGCAAATTCTCGGTGACTTTGGATCGGTTTATCAGTATTGCTTCTCCGAAATATCTCGGAGTTCAGTTTTGCACCTTCTAAATTTTGGTGAGGCCATAGCAATGGGAACACATACACCAGAGAAACTGTTCTGTTTACTTGACATGTATGAGGCATTAGAACATGTTGCAGTGGATAAAGATTTTTTGTTCATTGAAGAAATTGATTCTTTTGTTACAAGAGAGTTTCACAACCTTCAAAGAATCATTGTCGAAACTATAAAATCGACATTTCTTTCATTTAGAAATGCTATTGCAACAAATCCATCAAAAAAATGTTTTCCTTGTGGAGGTGTTCATCCTCTTACAAAATATGTCATGAATTACATCAATGCACTTGTTGAATATGGTGATAGTCTTGATCTTCTTGTCGATGAAACTTCGATCGATCCATCGGATAGCAATGATGAGAACAACTATGAAAACTCCACCCTTTCATGTTCTCCATTGGCTTGCAACTTAAGGCTAATCACTACAACTCTAGAATCAAACTTGTGTAACAAATCTAAGTTATACAATGATGTGGCTTTGCAACATATTTTCATGATGAATAATATTCATTACATGGTGCAAAAGGTTAAGTCTTCTAACCTATGTAATTTCTTCGGAGATTTATGGCTTCGTCGACATGTTGGCATGTTTCAACATTATGCTCGAAGCTATGAGAAGGTGAGTTGGAGTTCAGTACTTTCTTTTCTTCGTGACGAAAGTTTGTCGAATTGTGTCACAGAGAGAAAAATAAAGAAAAAATGCAAAGATTTTAGTGCTGCTTTTGGTGAAGTATACAAAACACAGACAGGTTGGAGTGTACCGGATAAAGAACTTCGCGAAGATTTACAGATATCCGTTTCTCAGAAAGTGATTCCTGCTTATCGAAGTTATACCGGTAGACACACGTCTAAAATTGATGAGAAGTGGATCAAGTACACGGTCGATGATCTACAATGCTATATTTTGGATCTTTTTCTAGGTTCATCAAAATCTTTGCATCATTCACATCATAGAAAGTGA 1707 0.3644 MEEDQHMVAAAQHILKALASSKTVSHEMRKTLLDLEIQLSTINERKGSGIKQLERKLKCLEDKVVMLRLEEELVQILVNHKQYFEVDYMSFNSNRVDLVYDESFGSVEDERINKVSRSIDDSLSEASNIDLVNPSVVEDLKSIAKAMFGSNYQHEFCHVFISSRRDALDEYFVILEIERLSIENMLKMEWQSLNRMIKKWIRAMKFIVQAYLVGEKRLCKQILGDFGSVYQYCFSEISRSSVLHLLNFGEAIAMGTHTPEKLFCLLDMYEALEHVAVDKDFLFIEEIDSFVTREFHNLQRIIVETIKSTFLSFRNAIATNPSKKCFPCGGVHPLTKYVMNYINALVEYGDSLDLLVDETSIDPSDSNDENNYENSTLSCSPLACNLRLITTTLESNLCNKSKLYNDVALQHIFMMNNIHYMVQKVKSSNLCNFFGDLWLRRHVGMFQHYARSYEKVSWSSVLSFLRDESLSNCVTERKIKKKCKDFSAAFGEVYKTQTGWSVPDKELREDLQISVSQKVIPAYRSYTGRHTSKIDEKWIKYTVDDLQCYILDLFLGSSKSLHHSHHRK* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4473 568 PANTHER EXOCYST COMPLEX PROTEIN EXO70 15 65 IPR004140 GO:0000145|GO:0006887
Tpr3g4473 568 PANTHER EXOCYST COMPLEX PROTEIN EXO70 64 561 IPR004140 GO:0000145|GO:0006887
Tpr3g4473 568 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 64 561 - -
Tpr3g4473 568 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 15 65 - -
Tpr3g4473 568 SUPERFAMILY Cullin repeat-like 64 554 IPR016159 -
Tpr3g4473 568 Coils Coil 43 70 - -
Tpr3g4473 568 Pfam Exo70 exocyst complex subunit 198 551 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr3g4473 568 Gene3D Exocyst complex component Exo70 39 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4473 Tpr-Chr3 49814511 49817149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4473 64 554 EXO70 exocyst subunit family AT5G61010 47.262 2.16e-152 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4473 K07195 - gmx:100791622 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4473 3 49814511 49817149 Tpr3g4473 3 49814511 49817149 ECH