Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4457 ATGGCCAAAGCCACAGTTGATGCTTTGACAGACCACGGTGATGAAAGTGTACGGAAACAGTTGCAGAATGAGTTAGATGGCGCAGAGCAACGCAGAGGTGTTTTCGTGATTGCTGCAACAAATAGGCCTGAGGTGATCGACAGTGCTCTCCTACGTCCTGGTAGATTTGGGAATCATATTTATATTCCTGTTCCAAGCCCAGACGGTGGTGCCTCGATATTGAAAGCTCTTGCAATGCATAAGGAAGCTCTTGCAAGGCGTATGGAAAATCGTGCAAGGTTTAAGCTTATGCCTATTAATGCCAGTGTGAATTTAAGCTCCATTGCAAGATCGAAAGCTTGTACTAATTTTAGTGGTGCTGATCTTGCTGCATTGATGGACAAAGCAATATTGGCTGCTCTTGAAGAGAAGCTGGCCACAACGGCAGAAAAAAGTGGTACATTGACAATCGAGGCAATGCATTTTAAGGTTGCGCTGAGCAAAGTCTTCCCCTTTGTGTCGAAAAAGAAAATTTTGAAGATCCTTAAAGCATGA 534 0.4401 MAKATVDALTDHGDESVRKQLQNELDGAEQRRGVFVIAATNRPEVIDSALLRPGRFGNHIYIPVPSPDGGASILKALAMHKEALARRMENRARFKLMPINASVNLSSIARSKACTNFSGADLAALMDKAILAALEEKLATTAEKSGTLTIEAMHFKVALSKVFPFVSKKKILKILKA* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4457 177 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 14 169 - -
Tpr3g4457 177 CDD AAA 6 63 - -
Tpr3g4457 177 Pfam AAA+ lid domain 102 139 IPR041569 -
Tpr3g4457 177 ProSitePatterns AAA-protein family signature. 34 52 IPR003960 GO:0005524|GO:0016887
Tpr3g4457 177 Gene3D - 4 64 IPR027417 -
Tpr3g4457 177 Gene3D - 65 171 - -
Tpr3g4457 177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 169 IPR027417 -
Tpr3g4457 177 Pfam ATPase family associated with various cellular activities (AAA) 13 63 IPR003959 GO:0005524|GO:0016887
Tpr3g4457 177 PANTHER AAA-FAMILY ATPASE 14 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4457 Tpr-Chr3 49617345 49621216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4457 17 164 Calmodulin-binding Proteins AT3G56690 37.162 1.31e-18 80.5