Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr3g4455 | ATGGGAAAGTTCCAAACAACCCTTCTCCGTCAAATCGATTCCTGCAAATCAAGTTTCTCAACCGCCGATGAAATCGTCAACCATCTTCGTTCAACTTACTCCGATTACCACCACAATGATTATCCATCACTCCTTCAGTTAGTTCAGAACGCTCTTCCGGCTACTCACACCACCACCAATCAATCTTCTCGAAAGAGACATCGCATTCATCAATCTGAAACTTCTACTTCCCCTCATTTTGCTCCCGAGAGTGGCGGCGAGAAAGCTGTTAACGGCGCCGGTGGTGGTGGTGGTGAGAAAGAAACTTCTACTTCCCCTGATTTTGCTCCCGAGATTAGCGGCGAGAAAGCTTCTAACGGCGCCGGCGGTGGCGGTGGTGGTGGTGGTGAGAACGAAACTTCTACTTCCCCTGATTTTGCTCCCGAGATTAGCGGCGAGAAAGCTTCTAACGGCGCCGGCGGTGGTGGTGGTGGTGGTGGTGAGAAAGAAACTTCGATTTCCCCTGATTTTGCTCCCGAGAGCAGTGGTGAGAAAGCTGTTAACGGCGCCGGCGGTGGTGGTGAGAAAGAAACTTCTAAAACTTCTCCAAAGAGACGTAAGATTGCTGAATCTGAATCTGAATATGATTATGATGATTTTGATGATGATGATGATGATGATGATGCTTATGATGATGATGATGAAAGAATGCAAAATGTGGAATCGACGAGCAAGGGAATTTCGTCTGAGTATTCTTCCGATAACGGAGACAGAGTAGTGTCAAAGACAGAAATGAAACGGGGACAACCGGTTAAGTTAATGCAGTTTTGGACCGGTGGTAGTGTCGGTGTTGGTGGTGGTGATGGAAAGAAGAAAATGAAGGGGACTATGTTTAAGGATTTAGTTGGAAATGAGATGAAGAAGATAATTAAAGAATTGAAGATAACTGTGAAATTACTGCGTCAGCCTGAATTGATTAGAGAGTATGGAATGAAACTGAAAAGAGGAATTTTGTTACATGGTCCTCCTGGTTGTGGAAAAACTAGACTTGCTCATGCTATTGGGAATGAAGCTGAAGTTCCATTTTATCCTATTTCTGCTACTGATGTTATTACTGCTGTCCCTGGTGGATCTGAAGAAAAGCTTAGAGAGCTTTTCGCTAAAGCAAAAAGGACGGCTCCATCAATTATCTTTATTGATGAGATTGATGCAATTGCTTCAAAACGAGAGGATTTAAAGCGACAGGTGGATTCACGAATCGTGACACAGTTATTAACTTGCATTGATGGAGATGGTTATTCAGGGAGTTCTGATAAACCTACTGGTTATGTTCTTGTAATTGGAGCCACAAATAGGCTCGATGCTGTTGACTCTGCTTTGAGAAGGCCTGGTCGTTTTGATCGAGAAATTCTTGTTGGCATTCCTGATGAATCTGCCAGGGAGGAGATCCTTGTCCTGCACACACGAAATTGCAGTCATAAGCTTGACGATTCGATTGATCTGCGAAAAATAGCCAGGTCCACGCCAGGATTTGTTGGTGCTGATTTAGAAGCTCTTGTTGGCGAAGTTAGCGAACTGGCATTTCAGAGGGTAATGGATGAAATGGAACATGAATCACATAATGATCTCATGAGTGATGATGAAGGCCGGTGGAAGGAACATTGGCCACCCCAACAAAAAAATAAATTTGCAATCAAAATGTCTGATTTTGAGGAAGCAGCCAAAATGGTGCAACCTTCGTTAACAAGAGAAGGATTCTCTCCCATTCCTGATGTTAAATGGGAAGATGTTGGTGCACTTGATCATGTAAGAGAGGAGTTTGATCAACACATTCTAAAGCGCATAAAAGACCCTGACATTTATGAGGGACTTGGGTTGAATTGTGACACGGGTTTTTTGCTTTACGGACCTCCAGGTTGTGGTAAAACACTGATTGCCAAAGCTGTTGCCAATGAAGCGGGAGCTAATTTCATTTATATTAAGGGTCCCGAGCTTCTAAATAAATATGTTGGAGAAAGCGAGCATGGAGTCCGGAAATTATTTGATCGTGCAAGAGCATGTGCACCATGTATACTTTTTTTTGACGAGGTGGATGATTTGTCAACAAAACATGTTAATGAAGGAGGTACACGGGTTATTGAAAGAGTGCTCAAACAGTTGCTTGTTGAGTTAGACGGTGCAGAGCAACGCAAAGGTGTTTTTGTGATTAGTGCAACAAATAGGCCTGAGGTGATGGACAGTGCTCTCCTACGGCCGGGTAGATTTGGTAATCTTATTTATATTCCTCTTCCAAGTCCAGACGATCGTGTTTCGATATTGAAAGCTCTTGCAAGGGGTAAGGAAACGCTTGCAAGGCGTGATCAAACTCGTGCAAGGTTTAAGCTTATGCCAATTGATGCTAGTGTGGATTTGTGCGCCATTGCAAGAATGAAAGCTTGTGAAAACTTTAGTGGCGCTGATCTTGCAGCATTGATGGACAAAGCAATATTGGCTGCTCTTGAACAGAAGCTCACCACAACCGGGGAAAAAAGTGATACATTGACTGTCAAGGCTAGGCATTTTGAGGTAGCACTGAGTAAACTATCTCCCTCTGTGTCCGAAGAGCAAAGGAAGCACTATCAGCGACTTTCAAAGAACCTTAAAGCAGCGTGA | 2631 | 0.4371 | MGKFQTTLLRQIDSCKSSFSTADEIVNHLRSTYSDYHHNDYPSLLQLVQNALPATHTTTNQSSRKRHRIHQSETSTSPHFAPESGGEKAVNGAGGGGGEKETSTSPDFAPEISGEKASNGAGGGGGGGGENETSTSPDFAPEISGEKASNGAGGGGGGGGEKETSISPDFAPESSGEKAVNGAGGGGEKETSKTSPKRRKIAESESEYDYDDFDDDDDDDDAYDDDDERMQNVESTSKGISSEYSSDNGDRVVSKTEMKRGQPVKLMQFWTGGSVGVGGGDGKKKMKGTMFKDLVGNEMKKIIKELKITVKLLRQPELIREYGMKLKRGILLHGPPGCGKTRLAHAIGNEAEVPFYPISATDVITAVPGGSEEKLRELFAKAKRTAPSIIFIDEIDAIASKREDLKRQVDSRIVTQLLTCIDGDGYSGSSDKPTGYVLVIGATNRLDAVDSALRRPGRFDREILVGIPDESAREEILVLHTRNCSHKLDDSIDLRKIARSTPGFVGADLEALVGEVSELAFQRVMDEMEHESHNDLMSDDEGRWKEHWPPQQKNKFAIKMSDFEEAAKMVQPSLTREGFSPIPDVKWEDVGALDHVREEFDQHILKRIKDPDIYEGLGLNCDTGFLLYGPPGCGKTLIAKAVANEAGANFIYIKGPELLNKYVGESEHGVRKLFDRARACAPCILFFDEVDDLSTKHVNEGGTRVIERVLKQLLVELDGAEQRKGVFVISATNRPEVMDSALLRPGRFGNLIYIPLPSPDDRVSILKALARGKETLARRDQTRARFKLMPIDASVDLCAIARMKACENFSGADLAALMDKAILAALEQKLTTTGEKSDTLTVKARHFEVALSKLSPSVSEEQRKHYQRLSKNLKAA* | 877 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr3g4455 | 876 | MobiDBLite | consensus disorder prediction | 191 | 206 | - | - | |
Tpr3g4455 | 876 | Gene3D | - | 583 | 867 | IPR027417 | - | |
Tpr3g4455 | 876 | Gene3D | - | 468 | 577 | - | - | |
Tpr3g4455 | 876 | Pfam | ATPase family associated with various cellular activities (AAA) | 330 | 465 | IPR003959 | GO:0005524|GO:0016887 | |
Tpr3g4455 | 876 | Pfam | ATPase family associated with various cellular activities (AAA) | 626 | 756 | IPR003959 | GO:0005524|GO:0016887 | |
Tpr3g4455 | 876 | Pfam | AAA+ lid domain | 794 | 848 | IPR041569 | - | |
Tpr3g4455 | 876 | Pfam | AAA+ lid domain | 491 | 529 | IPR041569 | - | |
Tpr3g4455 | 876 | Gene3D | - | 281 | 466 | IPR027417 | - | |
Tpr3g4455 | 876 | PANTHER | NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE | 77 | 872 | - | - | |
Tpr3g4455 | 876 | PANTHER | AAA-FAMILY ATPASE | 77 | 872 | - | - | |
Tpr3g4455 | 876 | Gene3D | - | 757 | 852 | - | - | |
Tpr3g4455 | 876 | MobiDBLite | consensus disorder prediction | 56 | 216 | - | - | |
Tpr3g4455 | 876 | MobiDBLite | consensus disorder prediction | 228 | 252 | - | - | |
Tpr3g4455 | 876 | CDD | AAA | 624 | 756 | - | - | |
Tpr3g4455 | 876 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 583 | 872 | IPR027417 | - | |
Tpr3g4455 | 876 | SMART | AAA_5 | 621 | 758 | IPR003593 | - | |
Tpr3g4455 | 876 | SMART | AAA_5 | 326 | 469 | IPR003593 | - | |
Tpr3g4455 | 876 | ProSitePatterns | AAA-protein family signature. | 437 | 455 | IPR003960 | GO:0005524|GO:0016887 | |
Tpr3g4455 | 876 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 285 | 568 | IPR027417 | - | |
Tpr3g4455 | 876 | MobiDBLite | consensus disorder prediction | 234 | 249 | - | - | |
Tpr3g4455 | 876 | CDD | AAA | 298 | 466 | - | - | |
Tpr3g4455 | 876 | ProSitePatterns | AAA-protein family signature. | 726 | 744 | IPR003960 | GO:0005524|GO:0016887 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr3g4455 | Tpr-Chr3 | 49595941 | 49602273 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr3g4455 | 525 | 857 | Calmodulin-binding Proteins | AT3G56690 | 38.623 | 7.55e-65 | 234 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr3g4455 | K14571 | - | tcc:18593187 | 716.842 |