Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4446 ATGAGTATGCTTTGTGATTTGAGTGATTATGATGATGAGCTCTACAAATTCTACCATAATGAAGAGACTCAAAACTCATGTTGCTACAAGTTAGATTCTCGAATGAGAAAGAGCGTAATAGATTGGTTGATACAGATACATTATGAACAAAAACTCACGTCGGAGACTCTTTACCTCTGCGTCAACGTTCTTGACCGTTTTCTTTCCAAATCCAATTATGAAGTTGCAACAAAAGATAAACTTAAGCTTCTTGGTTTGGCGTCGTTGATGTTAGCGTCTAAATATGAACAAAGAGGGGCAGTTGGAGTTTATGATATTGAATACTTGGCTGAGTATTCTTATTTTCCTGAGGAAATATGTGCAATGGAAAAACATATCCTGCAACAACTTGATTGGATTTTAACAGTTCCGACACCTTATGTTTTTCTTGTTAGAAACATAAGGGCGTGCCTTGTATCAGATCAAGATAAGATCATGGAGAATATGGCGTGTTTCTTCTCTGAGCTCAGCTTGACACAGTATTCTATCGTATGTCACTATAAACCTTCTGAGATTGCAGCTTCTGCGGTGTATTGTGCGAGAATTATTGTTGGAAGATACCCTTTTTGGAGCAACGAATTGAAGATATGTACAGGGTATTCTGTAGAGAAATTATTGTGTTGTGTCAAAGCTATGATGGAATTGTGCAATGATACTTGTAAAGAAGGAACCATGGAAGTTTTTAAAAAGTTTTCAAGCTTACATCAATCTAGGGTTTCCTGTGTTGTTCAGGAAACTCTGGAAGAAGCTTTTTTATCTTAG 801 0.367 MSMLCDLSDYDDELYKFYHNEETQNSCCYKLDSRMRKSVIDWLIQIHYEQKLTSETLYLCVNVLDRFLSKSNYEVATKDKLKLLGLASLMLASKYEQRGAVGVYDIEYLAEYSYFPEEICAMEKHILQQLDWILTVPTPYVFLVRNIRACLVSDQDKIMENMACFFSELSLTQYSIVCHYKPSEIAASAVYCARIIVGRYPFWSNELKICTGYSVEKLLCCVKAMMELCNDTCKEGTMEVFKKFSSLHQSRVSCVVQETLEEAFLS* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4446 266 Gene3D - 24 128 - -
Tpr3g4446 266 CDD CYCLIN 35 127 IPR013763 -
Tpr3g4446 266 PANTHER CYCLIN-B1-4 8 258 - -
Tpr3g4446 266 Pfam Cyclin, N-terminal domain 29 134 IPR006671 -
Tpr3g4446 266 Pfam Cyclin, C-terminal domain 137 255 IPR004367 -
Tpr3g4446 266 Gene3D - 129 264 - -
Tpr3g4446 266 CDD CYCLIN 135 226 IPR013763 -
Tpr3g4446 266 PIRSF Cyclin_A_B_D_E 4 264 IPR039361 -
Tpr3g4446 266 PANTHER CYCLINS 8 258 IPR039361 -
Tpr3g4446 266 SMART cyclin_7 141 227 IPR013763 -
Tpr3g4446 266 SMART cyclin_7 41 128 IPR013763 -
Tpr3g4446 266 SUPERFAMILY Cyclin-like 136 256 IPR036915 -
Tpr3g4446 266 ProSitePatterns Cyclins signature. 36 67 IPR006671 -
Tpr3g4446 266 SMART Cyclin_C_2 137 258 IPR004367 -
Tpr3g4446 266 SUPERFAMILY Cyclin-like 7 132 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4446 Tpr-Chr3 49520559 49521482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4446 9 255 Core Cell Cycle Gene Families AT2G26760 37.549 1.87e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4446 K21777 - twl:119990905 189.889