Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4436 ATGAGTTTTGTTCATAGAAGAAGAAGAATAACAAATAGAACAAGTGAAGGATCATTAATGTCAGAACAAGAATCTGATTCATGGAGTTTCATGTTGGTCTGTTTTTTGATCATTTTCTCAGGTAAACTTGTTGATGGAGATTCATTAGTAACAGATACAAAAGTATTATTGAATTTGAAATCCTATTTGGAGAATCAAACAGCTTCAAATAGAGGAGAATATTTAAGTTGGAACAAGAACAAATCAAATCCTTGTGATTGGTCAGGAATATCATGCAACCAAATCAAAGGTAAAAGAAAATGGAGGGTTGTAAGTGTAGATATCTCAGCAAGTGAAATTGCAGGTAAGATGTTTGATAAATTTTCTCAGTTAACTGAACTCACACACCTTGATGTTTCAATGAACACTCTCTCTGGAGAGATTCCTCAAGATATAAGAAAATGTAAGAATCTTGTGTATCTCAATTTATCTCATAATATTCTTGAGGGAGAAATGAATTTGACTGGTTTGAATAAGTTGCAAACATTGGATTTGTCTATGAATAGAATTCAAGGTGAACTTGAGTTGAATTTTCCTGATAATTGTGATAGTTTGGTCACTTTGAATGTTTCAGATAATCACTTTTTTGGTAGGGTTGATAGGTGTTTTGATAAGTGTTCAAAGTTGAAGTATTTGGATTTGAGTACAAATAATATAAGTGGTGTTTTATCAAATGAAATTTCAAGGTTGAGACAATTTTCAATTTCTGAAAATTTTCTAAGTGGGATTATACCTTCACAAGGTTTTCCAATGAATTGTAGTCTTGAAAAATTGGATCTTTCTGTCAATGGATTTTTCGGTAAACCGCCTAAGGAAGTTGCTAACTGCAAGAATTTGGAGATTCTAAATCTTTCTAGTAACAACTTTAGTGGTGAAATACCACATGAAATTGGTACAATTTCTGGTCTCAAATCATTGTTCTTGCAGAATAACACCTTTTCAAGAGATATTCCAAATACCCTTTTGAATTTGACCAATTTGTTTATCTTGGATATAAGTAGAAACAATTTTGGTGGTGAGGTACAGCAGATTTTTGGTAAATTCAAGCAATTGAAGTTTCTTTTGTTACACACAAATTCTTATGTTAAAGGATTGAATTCATCAGGAATTTTCACATTGACTAATCTTACAAGATTAGACTTAAGTTCCAACAACTTTTCAGGTCCATTACCTATTGAAATTTCTCAAATGTCTGGTCTCATTTTCTTATCATTAAGCAACAATAACTTCAATGGTTCTATTCCTTCTGAATTAGGAAAGATGAGTAAATTACAAGCAATTGAACTTTCTTTCAATAGTTTCAATGGAAAAATTCCACCGAGCCTTGGAAACTTGAGTTCTCTTCTTTGGTTAATGCTTGCAAATAATTCATTAACAGGCGAAATCCCTCGAGAGTTAGGTAATTGTTCAAGTTTGATATGGTTGAACCTTGCAAACAACAGACTCACCGGAAAATTTCCTTATGAGTTGACCAAAATTGGAAGAAATGCTGTGGAAACATTTGAATTGAATCATAGAAACATGGTTGGAGTAGTTGCTGGAAATAGTGAATGCTTGTCGATGAGAAGATGGATACCTGCCGATTACCCTCCATTCAGTTTTGTGTATAGTATCCTAACAAGGAAAAATTGTAGATCCCTTTGGGATAGATTGCTTAAAGGATATGGAATTTTTCCTATGTGTGCATCTGAACCATCAACTAGATCATCTCATAAATTTGGTTATGTTCAGTTAAGTGGTAATCAAATTAGTGGTGAAATTCCTTCAGAAATTGGAACCATGGTAAATTTCAGTATGTTACATTTAGGAGACAACAAATTCAGCGGCGAATTTCCAAAAGAAATTGGTGGTTTGCCACTTATAGTGTTGAACATGACTAGGAACAAATTTTCTGGGGAAATTCCTAGGGAAATTGGTAACATGAATTGTATGCAGGATCTTGATTTGTCTTGGAACAATTTCTCAGGTACATTTCCAACAAGTTTGGTCAATTTGGACCAACTTAGCAGGTTCAATATCTCATATAATCCTTTATTATCTGGTACAGTACCACCATTAGGCCACTTGCTTACTTTTGATAAGGATTCATATTTAGGTGATACCCTTTTAGATCTTCCAAAGTTTTTTTATAACACCCCAGATGGAAAAAACAAAACTTTTGAAAAAAGAATGAGAAAACCTACCAAATGGTATCTTTGTGTTGCTCTAACACTAGCTTGTTTGGTTTCTGGACTTCTTTTTCTGACTGTTTATTTCTTGGTGAAAAGTTCATCTTTAGAACAAGGAAAGTTTCTCAAAGATAAAAATCAGGAAATATTTTCTGATTCTATCAAGATATTCCACTTGAACAATATAGTTTTCACGTATGCCGACATTCTCGAGGCAACAAGCAACTTCAAAGAGGAAAGAATCATAGGAAAAGGTGGTTTCGGAACGGTCTACAAAGGAATTTTTCCTGATGGAAGAGAAGTGGCAGTGAAGAAGCTACAAAGAGAAGGAATTGAAGGTGAAAAAGAATTCAAAGCCGAAATGAAAGTCCTTAGTGGTCAAGAATTTGGATGGCCACATCCACACCTTGTCACACTTTATGGTTGGTGTTTATATGGTTCACAAAAGTTACTAGTTTATGAGTACATAGGAGGTGGAAGTTTGGAAGAATTAGTAACTGATACAAAAAAATTGACGTATAAAAGACGCTTAGAAGTCGCGATTGATGTGGCTAAAGCGTTAGTTTATCTACACCATGAATGTTACCCTTCAATTGTGCATAGAGATGTGAAAGCCAGTAATGTGTTGCTTGATAAAGAAGGTAAAGCAAAAGTAACTGATTTTGGACTTGCTAGAGTTGTCGATGTTGGTGATAGTCATGTGAGTACAATTGTAGCCGGAACTGTTGGTTATGTTGCACCTGAATATGGACAAACATGGCATGCTACAACAAAAGGTGACGTTTATAGTTTTGGTGTGTTGATTATGGAGTTGGCAACCGGGAGAAGAGCCGTGGATGACGGGGAAGAATGTTTGGTTGAATATGTTAGGCGTGTCATGGATAATGGTACAAATGGATTTAGCCATTTTGGACTAGTTGGTGGTGCAAAGGAGATGTTTGAGTTGCTTCAAGTTGGAGTAAAGTGCACAAATGATTCACCACAAAATAGGCCTAACATGAAAGAGGTTCTAGCTATGTTGATTAAGATATTCAATTTTTATAGAAGTTCAAATTATTGA 3267 0.3447 MSFVHRRRRITNRTSEGSLMSEQESDSWSFMLVCFLIIFSGKLVDGDSLVTDTKVLLNLKSYLENQTASNRGEYLSWNKNKSNPCDWSGISCNQIKGKRKWRVVSVDISASEIAGKMFDKFSQLTELTHLDVSMNTLSGEIPQDIRKCKNLVYLNLSHNILEGEMNLTGLNKLQTLDLSMNRIQGELELNFPDNCDSLVTLNVSDNHFFGRVDRCFDKCSKLKYLDLSTNNISGVLSNEISRLRQFSISENFLSGIIPSQGFPMNCSLEKLDLSVNGFFGKPPKEVANCKNLEILNLSSNNFSGEIPHEIGTISGLKSLFLQNNTFSRDIPNTLLNLTNLFILDISRNNFGGEVQQIFGKFKQLKFLLLHTNSYVKGLNSSGIFTLTNLTRLDLSSNNFSGPLPIEISQMSGLIFLSLSNNNFNGSIPSELGKMSKLQAIELSFNSFNGKIPPSLGNLSSLLWLMLANNSLTGEIPRELGNCSSLIWLNLANNRLTGKFPYELTKIGRNAVETFELNHRNMVGVVAGNSECLSMRRWIPADYPPFSFVYSILTRKNCRSLWDRLLKGYGIFPMCASEPSTRSSHKFGYVQLSGNQISGEIPSEIGTMVNFSMLHLGDNKFSGEFPKEIGGLPLIVLNMTRNKFSGEIPREIGNMNCMQDLDLSWNNFSGTFPTSLVNLDQLSRFNISYNPLLSGTVPPLGHLLTFDKDSYLGDTLLDLPKFFYNTPDGKNKTFEKRMRKPTKWYLCVALTLACLVSGLLFLTVYFLVKSSSLEQGKFLKDKNQEIFSDSIKIFHLNNIVFTYADILEATSNFKEERIIGKGGFGTVYKGIFPDGREVAVKKLQREGIEGEKEFKAEMKVLSGQEFGWPHPHLVTLYGWCLYGSQKLLVYEYIGGGSLEELVTDTKKLTYKRRLEVAIDVAKALVYLHHECYPSIVHRDVKASNVLLDKEGKAKVTDFGLARVVDVGDSHVSTIVAGTVGYVAPEYGQTWHATTKGDVYSFGVLIMELATGRRAVDDGEECLVEYVRRVMDNGTNGFSHFGLVGGAKEMFELLQVGVKCTNDSPQNRPNMKEVLAMLIKIFNFYRSSNY* 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4436 1088 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 21 1082 - -
Tpr3g4436 1088 ProSiteProfiles Leucine-rich repeat profile. 150 171 IPR001611 GO:0005515
Tpr3g4436 1088 Gene3D Ribonuclease Inhibitor 362 721 IPR032675 -
Tpr3g4436 1088 ProSiteProfiles Protein kinase domain profile. 812 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4436 1088 SMART serkin_6 812 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4436 1088 ProSitePatterns Serine/Threonine protein kinases active-site signature. 934 946 IPR008271 GO:0004672|GO:0006468
Tpr3g4436 1088 SMART LRR_typ_2 124 148 IPR003591 -
Tpr3g4436 1088 SMART LRR_typ_2 313 337 IPR003591 -
Tpr3g4436 1088 SMART LRR_typ_2 170 194 IPR003591 -
Tpr3g4436 1088 SMART LRR_typ_2 386 410 IPR003591 -
Tpr3g4436 1088 SMART LRR_typ_2 458 482 IPR003591 -
Tpr3g4436 1088 Gene3D Phosphorylase Kinase; domain 1 773 891 - -
Tpr3g4436 1088 Gene3D Ribonuclease Inhibitor 166 263 IPR032675 -
Tpr3g4436 1088 Gene3D Ribonuclease Inhibitor 264 358 IPR032675 -
Tpr3g4436 1088 ProSitePatterns Protein kinases ATP-binding region signature. 818 841 IPR017441 GO:0005524
Tpr3g4436 1088 Pfam Protein kinase domain 812 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4436 1088 CDD STKc_IRAK 818 1079 - -
Tpr3g4436 1088 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 21 1082 - -
Tpr3g4436 1088 SUPERFAMILY Protein kinase-like (PK-like) 792 1077 IPR011009 -
Tpr3g4436 1088 SUPERFAMILY RNI-like 108 310 - -
Tpr3g4436 1088 SUPERFAMILY L domain-like 241 696 - -
Tpr3g4436 1088 Pfam Leucine Rich repeat 171 186 IPR001611 GO:0005515
Tpr3g4436 1088 Pfam Leucine Rich repeat 289 305 IPR001611 GO:0005515
Tpr3g4436 1088 Pfam Leucine Rich repeat 386 401 IPR001611 GO:0005515
Tpr3g4436 1088 Pfam Leucine Rich repeat 218 234 IPR001611 GO:0005515
Tpr3g4436 1088 Gene3D Transferase(Phosphotransferase) domain 1 893 1086 - -
Tpr3g4436 1088 Pfam Leucine rich repeat N-terminal domain 52 93 IPR013210 -
Tpr3g4436 1088 Gene3D Ribonuclease Inhibitor 51 165 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4436 Tpr-Chr3 49417921 49423216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4436 77 1079 Receptor kinase-like Gene Family AT4G39400 32.978 8.88e-142 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Tpr3g4436 Pkinase 7.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4436 - - mtr:MTR_3g437630 1850.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4436 3 49417921 49423216 Tpr3g4436 3 49417921 49423216 ECH