Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4433 ATGGGTTGTGTGAGTTCGAAGCAACAACAACAAGCAGTGTCGGTGACGCCGGCGAATGAAAATTCAGGGAAAGTGAAAAGTGAGTTAGGTAGAACGAGTCAGAATGAGTCAGGGAGAACGAGTGAGAATTGTTGTGAGTCGTTGAGTTTCAGGTTGGAGAATTTGCACAAGTTTGTCCAAAGTGAACACTTGGCAGCTGGTTGGCCTGCTTGGCTTAGCGCCGTCGCTGGTGATGCTATTCATGGTTGGATTCCTCTTCGTCCTGATGCCTTTCACAAACTCCAAAAGATTAAGTGCTATATGAAGCAATTGTTATCTGCTGTTGAGTACTTTCATTCGCGGGGTGTGATGCACCGGGACATCAAAGGATCCAATCTTCTGGTGAATAATGAAGGAATATTGAAGGTGGCAGATTTTGGATTGGCGAACTTCATTAGGTCTGGGAAAAAACATCCCCTCACTAGTCGTGTTGTCACATTATGGTATCGTCCACCGGAGCTTTTGCTTGGTTCGACGGATTATGATTCTTCTGTGGATCTTTGGAGTGTTGGCTGCGTCTTTGCAGAGCTACTTGTTAGGATTCCTATACTTCAGGGGAAAACTGAGGTAGAACAATTACACAAAATTTTCAAGCTTTGTGGCTCCCCACCAGATGAATACTGGAAAAGGATTGAACTTCCTCGTGCAACTTTGATATATGATGGTTGCTTCAAAGAGTACTTTAAAGATTTGCCTCCAACCAGTGTACATTTGCTACAAACTCTTCTGTCTGTTGAACCTTACAAACGTGGGACTGCCACATCTGCTCTCTCATCAGAGTATTTCAAAACACAACCTTATGCATGTGATCCATCAAGCTTGCCGAAATACCTGCCTAGCAAGGAAATTGACGCAAGACAAAGGGCGACAGAGGAGGCAAGGAAAAAGAATGGAAGAGTTCTTCGAACCGAAACAATGAAACCATCAAGAAAGCCACAGGACTTAGCAAATCAAACGCAAAATTCTCAAAAGGTCAAGAGTAGATCTTTCCGAATCCTTGAAGAAGAGAAGAGTAACTTTGTTTTGAAGGCACAAAAACCATCGAGAGATATACATGAATATGCTTCACATATGAAGAATGCATCTCAAGGAGATATTCCCTTTTCTGGACTATTGCAAATTTCAAACTCAAGTGGCTTTGCTTGGGCAAAAAGCCGGAAAGACGACACTTCAATTCGATCACGTTGTCAATCTTTTTCTAAAGGACATAGCTTCAATGCTTTAGATTCTTCTGTATTAAACAGGAGGAATAATTTGGAAACAATAAATCATGATAATAAGGAGTTTTGTGGGAGAAATACCAACTCTAGACACTTTGAAATTTCTAAGGCTTCAAAGCACAATCAATGGAGTAGGTTCGATCGTCTAGATTCACTCGATGCTTCTGATGAGTACCACTCACAAGAATTGTCGGCGCTTTATCAGGGAGAAGATTCATTATCTACAAGAAGTAATCTGAGTTACCAGGATCAAGGAGAAAAGATTGGCTTTTCAGGACCCCTACTGTCTAAAATGCACACGGTGGACGAGCTCTTAGAAAGGAACGAGCGTCACATCCGGCGAACGGTCCGAAAATCATGGTTTCATAAAGGTAAGAAAAATGGGAAGAAAATGTAG 1656 0.4197 MGCVSSKQQQQAVSVTPANENSGKVKSELGRTSQNESGRTSENCCESLSFRLENLHKFVQSEHLAAGWPAWLSAVAGDAIHGWIPLRPDAFHKLQKIKCYMKQLLSAVEYFHSRGVMHRDIKGSNLLVNNEGILKVADFGLANFIRSGKKHPLTSRVVTLWYRPPELLLGSTDYDSSVDLWSVGCVFAELLVRIPILQGKTEVEQLHKIFKLCGSPPDEYWKRIELPRATLIYDGCFKEYFKDLPPTSVHLLQTLLSVEPYKRGTATSALSSEYFKTQPYACDPSSLPKYLPSKEIDARQRATEEARKKNGRVLRTETMKPSRKPQDLANQTQNSQKVKSRSFRILEEEKSNFVLKAQKPSRDIHEYASHMKNASQGDIPFSGLLQISNSSGFAWAKSRKDDTSIRSRCQSFSKGHSFNALDSSVLNRRNNLETINHDNKEFCGRNTNSRHFEISKASKHNQWSRFDRLDSLDASDEYHSQELSALYQGEDSLSTRSNLSYQDQGEKIGFSGPLLSKMHTVDELLERNERHIRRTVRKSWFHKGKKNGKKM* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4433 551 MobiDBLite consensus disorder prediction 323 340 - -
Tpr3g4433 551 SUPERFAMILY Protein kinase-like (PK-like) 91 282 IPR011009 -
Tpr3g4433 551 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 96 542 - -
Tpr3g4433 551 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 26 97 - -
Tpr3g4433 551 Gene3D Transferase(Phosphotransferase) domain 1 90 315 - -
Tpr3g4433 551 MobiDBLite consensus disorder prediction 1 40 - -
Tpr3g4433 551 MobiDBLite consensus disorder prediction 296 340 - -
Tpr3g4433 551 ProSiteProfiles Protein kinase domain profile. 1 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4433 551 MobiDBLite consensus disorder prediction 296 322 - -
Tpr3g4433 551 PANTHER CELL DIVISION PROTEIN KINASE 26 97 - -
Tpr3g4433 551 PANTHER CELL DIVISION PROTEIN KINASE 96 542 - -
Tpr3g4433 551 Pfam Protein kinase domain 93 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g4433 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
Tpr3g4433 551 SMART serkin_6 23 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4433 Tpr-Chr3 49393789 49401103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4433 87 325 Core Cell Cycle Gene Families AT5G10270 46.800 1.74e-64 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Tpr3g4433 Pkinase 9.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4433 - - gmx:100796719 674.085