Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr3g4430 | ATGGCCACTCAAACCCCTTCTGATTCTCTCGATCATTCCCTTCTCGACGTCGACGACTACGTTTTGGAAAATGGACCAGAAGGATTGGCATGGGACACATTTCATTATGTTTACGAGCTTGTACAAAAGGGAAATTTGGCCTTTCGAGAGAACAGAATGGAAGAGGCAGTCAACTTTTACTCAAGAGCCAATAGCATCAAATCTAGTGATCCAATCATCCTCGGCAATAGAAGTGCAGCTTATATTAGGATTAGTCAATATTTAATGCATAGATCATCATCATCCTCAGAACATAGGCCATTGAGTGGGCTTGATCCCACAACACTTGCCGAACTGGGATTGAAAGATGCTGCAAAGCTTGTGGAACTCCAAAGTAATTCAGTAAAACCATACCTTTTGAAGGCCAACGCGCTTCTTCTATTAGAGAAATATGATGTGGCTCAGGATGTTATTCTTTCAGGACTTCAAGTTGATCCTTTCAGTAATTCCCTTCGGGAATGTCTTCAAAAAGTGGAAAGAGTATCATCTAGTTCAACAGGGAGAAGTGCACACGGACAACCAGAGCGCAATGATGACTTTGATTGCACTCTGTGCCTGAAGTTACTGTATGAACCTGTCACAACCCCCTGTGGACATTCTTTTTGCCGCTCATGTCTATTTCAGTCAATGGATCGTGGAAACAGATGCCCATTGTGCAGGACAGTTCTGCTCATTAGCCCCAAAACATGTTCAATTAGTGTGACATTGAAGAGCATCATACAAAAGAACTTTCCAGAGGAATATGCTGAAAGGAAGCAAGAGCATGACAGTTTAGTTAATATTGGTGTAGATATGCTCCCTCTTTTTGTCATGGATGTTGTCTTACCATGTCAAAGGATTCCCCTAAATATATTTGAACCTCGTTATAGACTTATGGTAAGAAGAATAATGGAAGGCAATCGTCGGATGGGAATGGTTATAATAGATTCTTCAACGGGTTCATTAGCAGAGTTTGGGTGTGAAGTAGAAATCACAGAGTGTGAGCCACTTCCAGATGGCCGTTTTTATATAGAGATTGAAGGTCGTAGGAGATTTCGCAACCTCCGTTCTTGGGATCAAGATGGGTATCGTGTTGCAGAAGTTGAATGGATACAGGATATTATGCCGCCAGAAGGGACAAAAGAAAAAGAGGATTTACAGGAATTGACATATAATGCCGCAGAAAGTGCTCGATCATGGATAGGAAGAGCTAAAGAATTAGCAAGACAAGATCAAAGATTAGAGAAACTCGTGAATGTTGAAGGAATGATGCCCTCATTAAGAGACCCCGAGCGCTTTAGTTTTTGGCTGGCTACCCTCTCCAATCGGAGGCCTTCAGAAAGATTGGATCTCCTACGGATTAGAGACACTACAGAGAGAATTAGACGAGCCCTGATATTTCTTCGAGCGGATGAACAAGGCTGCAGAATTCAGTAA | 1455 | 0.422 | MATQTPSDSLDHSLLDVDDYVLENGPEGLAWDTFHYVYELVQKGNLAFRENRMEEAVNFYSRANSIKSSDPIILGNRSAAYIRISQYLMHRSSSSSEHRPLSGLDPTTLAELGLKDAAKLVELQSNSVKPYLLKANALLLLEKYDVAQDVILSGLQVDPFSNSLRECLQKVERVSSSSTGRSAHGQPERNDDFDCTLCLKLLYEPVTTPCGHSFCRSCLFQSMDRGNRCPLCRTVLLISPKTCSISVTLKSIIQKNFPEEYAERKQEHDSLVNIGVDMLPLFVMDVVLPCQRIPLNIFEPRYRLMVRRIMEGNRRMGMVIIDSSTGSLAEFGCEVEITECEPLPDGRFYIEIEGRRRFRNLRSWDQDGYRVAEVEWIQDIMPPEGTKEKEDLQELTYNAAESARSWIGRAKELARQDQRLEKLVNVEGMMPSLRDPERFSFWLATLSNRRPSERLDLLRIRDTTERIRRALIFLRADEQGCRIQ* | 485 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr3g4430 | 484 | PANTHER | RING FINGER PROTEIN 127 | 13 | 478 | - | - | |
Tpr3g4430 | 484 | SUPERFAMILY | TPR-like | 36 | 168 | IPR011990 | GO:0005515 | |
Tpr3g4430 | 484 | ProSiteProfiles | Lon N-terminal domain profile. | 276 | 476 | IPR003111 | - | |
Tpr3g4430 | 484 | SMART | ring_2 | 195 | 232 | IPR001841 | - | |
Tpr3g4430 | 484 | Pfam | ATP-dependent protease La (LON) substrate-binding domain | 279 | 474 | IPR003111 | - | |
Tpr3g4430 | 484 | SMART | lon_5 | 278 | 476 | IPR003111 | - | |
Tpr3g4430 | 484 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 181 | 274 | IPR013083 | - | |
Tpr3g4430 | 484 | SUPERFAMILY | RING/U-box | 190 | 258 | - | - | |
Tpr3g4430 | 484 | Gene3D | Tetratricopeptide repeat domain | 36 | 174 | IPR011990 | GO:0005515 | |
Tpr3g4430 | 484 | Pfam | Zinc finger, C3HC4 type (RING finger) | 195 | 232 | - | - | |
Tpr3g4430 | 484 | Gene3D | - | 277 | 379 | IPR046336 | - | |
Tpr3g4430 | 484 | ProSiteProfiles | Zinc finger RING-type profile. | 195 | 233 | IPR001841 | - | |
Tpr3g4430 | 484 | PANTHER | 43KDA POSTSYNAPTIC PROTEIN-RELATED | 13 | 478 | - | - | |
Tpr3g4430 | 484 | SUPERFAMILY | PUA domain-like | 279 | 474 | IPR015947 | - | |
Tpr3g4430 | 484 | ProSitePatterns | Zinc finger RING-type signature. | 210 | 219 | IPR017907 | - | |
Tpr3g4430 | 484 | Gene3D | - | 410 | 476 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr3g4430 | 186 | 236 | C3H Transcription Factor Family | AT1G74990 | 35.185 | 3.99e-09 | 53.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr3g4430 | - | - | gmx:100802277 | 783.482 |