Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4429 ATGAAGATGAAGAAGATTCATTTCAGCAAGATCTATTCATTTAAATTTGGTAAGAAAACAAAGTTTAGGAGAGAGCATTCACAAATTGGAAGACAAGGGTATTCTAGAGTTGTTTTATGCAATGAATTACAAGATAGTTTTGAATCAGATTTGATTAGGAATTATGCTGATAATTCTGTTAGGTCAACTAAATATACTGTTGCGAGTTTCTTCCCAAAGTCATTGTTTGAGCAGTTTAGGAGAATAGCTAATTTCTATTTCCTTGTTGTTGGTATCTTAGCTTTCACAAAACTTGCTCCTTATACTGCTGTTAGTGCTATTCTTCCTTTATGTATTATCGTTGGAGCGACCATGGTGAAAGAAGGTATTGAAGATTTGCGTCGGAAAAAACAGGATATCGAGGTGAACAATAGAAAAGTTATATTTCATAAAGGTGATGGCAATTTCGAATATACGGAGTGGAAGAATCTCAAGGTAGGAAATATAGTGAAGATAAAGAAGGATGAATTCTTCCCTGCCGACCTCCTACTGCTTTCGTCCAGTTACGAAGATGCAGTCTGCTATGTTGAAACCATGAACTTGGATGGTGAGACAAATTTGAAGCTAAAACAAGGTTTGGAAGTAACTTCTTCGTTAAATGAGGAAGTTAAACTCCATGATTTCAAAGCTACTGTCAAATGTGAAGATCCAAATGCAAATTTGTACTCATTTGTCGGGAGCATGGAATTTGAAGGGCAAAAATATCCACTTTCTCCTCAGCAGCTTCTTCTCAGAGACTCAAAACTTCGTAATACAGACTACGTATTTGGAGCTGTCATTTTTACCGGCCACGACACGAAGGTTATTCAAAACAGTACTGACCCTCCTTCCAAAAGAAGCAAAATCGAGAAGAAGATGGATAAGATTATCTACTTCTTATTTGGTGTGCTGTTTTTAATTGCTTTCGTTGGATCTATTATCTTTGGAATCGTAACCAAACGCGACTTGCACAACGGATTTATGAAAAGATGGTATCTGAGACCAGATGATTCCACTATTTTCTTTGATCCTAAAAGAGTTGTCGCAGCTTCTGTATATCATTTCTTGACGGCTTTAATGCTATATAACTTTTTCATTCCCATCTCCTTGTATTTCTCGATTGAATTGGTCAAAATCCTTCAAAGCATCTTCATTAATCAAGATATCAATATGTACTATGAAGAACTGGACAAACCAGCTCTTGCACGTACTTCAAACTTGAATGAAGAACTCGGCCAAATTGACACGATCCTTTCTGATAAAACTGGAACTTTGACTTGCAACTCGATGGAGTTCATCAAATGTTCTGTTGCTGGGGTAGCTTATGGCCGTGTTGTTACAGAGGTTGAACAAGCCATTGGCAGTATAAGTAATAGTTCACCTATGATTCATGAACATGTTAATAGGTTGGAACGGACAGTTGATTCCAGTGAATCTCATGATCGTAAAGAACCAATCAAAGGTTTTAACTTTATAGATGAAAGGATAATGAACGGAAATTGGGTTAATGAGCCTCGCGCAGATGTTATACAGAAGTTTTTCCGATTATTGGCTGTTTGTCATACTGCCATACCAGAAGTGGATGACGATACCGGAAGAGTCACGTATGAAGCTGAATCTCCCGATGAAGCAGCATTTGTGATTGCTGCAAGAGAAGTTGGTTTCACATTCTATAAAAGGAGTCAGAATAGTTTATCAATGAGAGAGTTGGACCCTGTTTCTGGCAATGAAGTTGAAAGGACATACAAGATTCTCCATGTTTTAGAATTCAATAGTTCAAGGAAGCGAATGTCGGTGATAGTTAAAGATGAAGAAGGGAGAATTTTACTACTCTGCAAAGGCGCTGACAGTGTCATGTTTGAAAGGCTTGCGCTGAATGGAAGAGAATTTCAGGAGAAAACTATGGAACATGTGGGTGAATATGCTGATGCAGGTCTAAGAACCCTGATACTAGCCTATCGTGAACTTGATGAAGAAGAATATAACGAGTTTGACAATAAATTTATGGAAGTGAAAAATTCAGTCACTGTAGATCGTGAATCACTGATTGAAGAACTATCAGATAAGATTGAGAGGAATCTAGTCCTTCTCGGTGCCACTGCTGTTGAAGACAAGCTCCAAGATGGGGTTCCTGAGTGTATTGAAAAGCTTGCGCAAGCTAGAATTAAGATATGGGTTTTGACTGGGGATAAAATGGAAACTGCCATCAACATTGGTTTCTCTTGTCGCTTGCTTCGACAAGGAATGAAACAGATTATAATTCATTTGGAGATTCCAGAAATTCAAGCATTGGAGAAGCATGAAGACAAGATGGCTATCATCAAGGTATCAAGGGAAAGTGTATATCAACAGATATCTGAAGGTTCTAAACTGCTTTCTGCATCTAAAGGGACCTCTCAGCAAGCATTTGCTCTGATAATTGATGGAAAATCACTAGTTTATGCTCTGGAGGATGATATAAAGAACAAATTTTTAGAGCTTGCAACTCGCTGTGCATCTGTTATCTGCTGTCGCTCATCCCCAAAGCAGAAGGCACTGGTTACTAGACTGGTCAAAGAAGGAACTGGTAAAACAACATTAGCTATTGGTGATGGAGCTAATGATGTAGGAATGATTCAAGAGGCTGATGTAGGTGTTGGAATTAGTGGCGTTGAAGGAATGCAGGCTGTCATGTCTAGCGATATTGCAATTGCGCAATTCCGGTATTTGGAAAGACTGCTTCTTGTGCACGGACATTGGTGTTACCGGAGGATGTCCTCAATGATATGTTTCTTTTTCTACAAGAACATTACATTTGGTTTCACTATATTCTTATATGAAGTGTATGCGTCGTTCTCTGGACAGCCTGCATACAACGACTGGTTTTTATCTTTCTATAGTGTCATGTTTTCTTCACTTCCTGTCATTGCACTTGGGGTCTTTGACCAAGATGTATCTGCCAGGTACTGCCAGAAGTTTCCTATCTTATACCAAGAAGGCGTACAAAATGTCCTATTTAGCTGGCGCCGAATTCTAAGCTGGATGCTCAACGGATTCATCAGTGCCATAACAATTTTCTTCTTCTGCACAAAAGCGATAGGCCTTAAAGCCTTCGACGAGAATGGAAAAACCGCCGGAAAAGACATGCTAGGAGCAACTATGTATACTTGCGTTGTTTGGGTTGTAAACCTACAAATGGCGCTTGCCGTGCAATACTTCACCTTGATACAACATATTGCTATTTGGGGTTCTATTGCTCTTTGGCATTTCTTCATGTTTGTTTATGGATCATTGCCTTCAAGCTTTTCAACAAATGCTTACAAAGTCTTTGTTGAGACTCTTGCTCCATCTCCTTCCTTTTGGATTGTCACATTATTCGTGGCGGTTTCTTCGCTTATACCGTACTTTTCATGCTCCACGATTAAAATGTGGTTGTTTCCTATGCATCATGAAAGGATACAATGGATGAGGTATGAGAGCAATAAGAAGACTAATGAACCTGAATAG 3504 0.389 MKMKKIHFSKIYSFKFGKKTKFRREHSQIGRQGYSRVVLCNELQDSFESDLIRNYADNSVRSTKYTVASFFPKSLFEQFRRIANFYFLVVGILAFTKLAPYTAVSAILPLCIIVGATMVKEGIEDLRRKKQDIEVNNRKVIFHKGDGNFEYTEWKNLKVGNIVKIKKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSSLNEEVKLHDFKATVKCEDPNANLYSFVGSMEFEGQKYPLSPQQLLLRDSKLRNTDYVFGAVIFTGHDTKVIQNSTDPPSKRSKIEKKMDKIIYFLFGVLFLIAFVGSIIFGIVTKRDLHNGFMKRWYLRPDDSTIFFDPKRVVAASVYHFLTALMLYNFFIPISLYFSIELVKILQSIFINQDINMYYEELDKPALARTSNLNEELGQIDTILSDKTGTLTCNSMEFIKCSVAGVAYGRVVTEVEQAIGSISNSSPMIHEHVNRLERTVDSSESHDRKEPIKGFNFIDERIMNGNWVNEPRADVIQKFFRLLAVCHTAIPEVDDDTGRVTYEAESPDEAAFVIAAREVGFTFYKRSQNSLSMRELDPVSGNEVERTYKILHVLEFNSSRKRMSVIVKDEEGRILLLCKGADSVMFERLALNGREFQEKTMEHVGEYADAGLRTLILAYRELDEEEYNEFDNKFMEVKNSVTVDRESLIEELSDKIERNLVLLGATAVEDKLQDGVPECIEKLAQARIKIWVLTGDKMETAINIGFSCRLLRQGMKQIIIHLEIPEIQALEKHEDKMAIIKVSRESVYQQISEGSKLLSASKGTSQQAFALIIDGKSLVYALEDDIKNKFLELATRCASVICCRSSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADVGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRMSSMICFFFYKNITFGFTIFLYEVYASFSGQPAYNDWFLSFYSVMFSSLPVIALGVFDQDVSARYCQKFPILYQEGVQNVLFSWRRILSWMLNGFISAITIFFFCTKAIGLKAFDENGKTAGKDMLGATMYTCVVWVVNLQMALAVQYFTLIQHIAIWGSIALWHFFMFVYGSLPSSFSTNAYKVFVETLAPSPSFWIVTLFVAVSSLIPYFSCSTIKMWLFPMHHERIQWMRYESNKKTNEPE* 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4429 1167 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1153 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Tpr3g4429 1167 Gene3D - 703 908 IPR023214 -
Tpr3g4429 1167 Gene3D - 550 702 IPR023299 GO:0000166
Tpr3g4429 1167 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 704 IPR023299 GO:0000166
Tpr3g4429 1167 SUPERFAMILY Calcium ATPase, transduction domain A 142 283 IPR008250 -
Tpr3g4429 1167 Pfam Phospholipid-translocating P-type ATPase C-terminal 896 1146 IPR032630 -
Tpr3g4429 1167 CDD P-type_ATPase_APLT_Dnf-like 57 1028 - -
Tpr3g4429 1167 SFLD Haloacid Dehalogenase 406 919 - -
Tpr3g4429 1167 Pfam Phospholipid-translocating ATPase N-terminal 52 106 IPR032631 -
Tpr3g4429 1167 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1165 - -
Tpr3g4429 1167 SUPERFAMILY HAD-like 419 923 IPR036412 -
Tpr3g4429 1167 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1145 IPR023298 -
Tpr3g4429 1167 Gene3D - 117 286 - -
Tpr3g4429 1167 Pfam Cation transport ATPase (P-type) 535 628 - -
Tpr3g4429 1167 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Tpr3g4429 1167 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Tpr3g4429 1167 PRINTS P-type cation-transporting ATPase superfamily signature 868 887 - -
Tpr3g4429 1167 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1165 - -
Tpr3g4429 1167 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 840 950 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr3g4429 1167 SFLD p-type atpase 406 919 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4429 Tpr-Chr3 49298343 49306164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4429 6 1167 Primary Pumps ATPases AT1G68710 70.791 0.0 1756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4429 K01530 - gmx:100798329 1925.98