Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4421 ATGCAAGAATCACTTAATCCAACAACAAACATGAAGAGGTTCCATACTAAGAATCATGATGACCATGATGAAGTTCTTTCTGATTCTCACACTCGTTCTTCCTCAATTTCCAATAGAAAATGTTCTCTTTTCACTTCAACTCGTTTCTTCGCTTCTCTCTTTGTTATCACTCTCTTTCTCTGCTCTCTCTCCTTCATTCTTCCATCTTCTCCATCAACAACTACTGCTACTACTACTCTCAATCTCAAACAAACTCAACAACAAGGTTTGAGCAGTGATGCTTCTGATTCTGGTGAGTTCATAAAAGATAAACTACTTGGTGGACTTCTAGCAGCTGGATTTGACGATAAATCCTGTCTCAGCAGGTATCATTCAGTTAAAGGCCTATCAGGAAATCCATCTCCTTACCTCATTTCTAGATTACGAAAATATGAAGCTCTCCACAAAAAATGCGGACCATATACAGAATCCTACAATAAGACGGTGAAAGATCTTGGTTCTGGTCATTTAAGTGAGTCCCTAGATTGTAAATACGTAGTTTGGATTTCATTTAGTGGTTTAGGGAACAGGATATTGACCTTAGCTTCTGCATTTCTTTATGCGCTCCTCACAAACCGTGTTCTTTTGGTTGATCCTGGAGTTGATATGGTCGATCTCTTTTGTGAACCGATTCCAGATGTTTCCTGGTTTCTCCCTCCTGATTTCCCTCTAACCGGTCAATTTCATAGTTTCAATCAGAAATCTGATCACTGTCATGGAAAAATGCTGAAAAATAAAGCAGTCACAAATTCAAAAGTGCCTTCTTCTGTCTACCTTCATTTGGTGCATGATTATGATGACGAGGATAAGCTTTTCTTCTGCGATGAAGAACAAAAGTTTCTGCAGAAAGTACCTTGGTTAATGATGAAAACAGATAATTACTTTATTCCATCACTATTCTTGATGCCGTCTTTTGATCAGGAGCTCGGTAATCTCTTTCCAAACAAGGAAAAAGTTTTCCATTTCTTAGGCAGGTATTTGTTTCACCCTACAAACAATGTATGGGGATTTGTTACTAGATACTATCAAGCTTATTTAGCTAATGCTGATGAAAGAGTCGGCATCCAGATTAGGGTCTTCGATACGAGAACCGGTCCATTTCAATATGTACTAGATCAAATCTTAGCTTGTACTATGAAGGAGAATATCTTGCCTAATGTTGACAAGAAGCATGATATTATCAGTTCATTAGGAAATTCGAAGTCGAAAGCGGTGCTAATGACATCCTTAAATTCTGGTTATTTTGAAAAAATAAGAGACATGTATTGGGAATATCCAACGGTGACAGGAGAAGTTATCAGTGTTTCGCAACCAAGCCATGAGGGACATCAACAAACTGAGAAGCAAATACACAACCAAAAAGCTTGGGCAGAAATGTATCTACTGAGTTTAACCGATGTGTTGGTAACTAGCTCGTGGTCTACTTTCGGCTACGTGGCGCAGGGGCTCGGAGGTCTGAAACCTTGGATACTATACAAACCAGAGAATGAAACAGCGCCTGATCCTTCTTGTCGTCGTGTGACGTCGATGGAGCCTTGTTTTCATGCTCCTCCCTTCTATGATTGTAAGGCAAAGAGAGGAACTGATACAGGTGCACTTGTTCCGCATGTAAGACATTGTGAGGATATGAGTTGGGGTCTTAAGCTTGTAGACAATTAG 1698 0.3958 MQESLNPTTNMKRFHTKNHDDHDEVLSDSHTRSSSISNRKCSLFTSTRFFASLFVITLFLCSLSFILPSSPSTTTATTTLNLKQTQQQGLSSDASDSGEFIKDKLLGGLLAAGFDDKSCLSRYHSVKGLSGNPSPYLISRLRKYEALHKKCGPYTESYNKTVKDLGSGHLSESLDCKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGVDMVDLFCEPIPDVSWFLPPDFPLTGQFHSFNQKSDHCHGKMLKNKAVTNSKVPSSVYLHLVHDYDDEDKLFFCDEEQKFLQKVPWLMMKTDNYFIPSLFLMPSFDQELGNLFPNKEKVFHFLGRYLFHPTNNVWGFVTRYYQAYLANADERVGIQIRVFDTRTGPFQYVLDQILACTMKENILPNVDKKHDIISSLGNSKSKAVLMTSLNSGYFEKIRDMYWEYPTVTGEVISVSQPSHEGHQQTEKQIHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENETAPDPSCRRVTSMEPCFHAPPFYDCKAKRGTDTGALVPHVRHCEDMSWGLKLVDN* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4421 565 Gene3D - 350 515 - -
Tpr3g4421 565 Gene3D - 174 216 - -
Tpr3g4421 565 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 11 565 - -
Tpr3g4421 565 Pfam Xyloglucan fucosyltransferase 79 536 IPR004938 GO:0008107|GO:0016020|GO:0042546
Tpr3g4421 565 MobiDBLite consensus disorder prediction 13 29 - -
Tpr3g4421 565 PANTHER FUCOSYLTRANSFERASE 2-RELATED 11 565 IPR004938 GO:0008107|GO:0016020|GO:0042546
Tpr3g4421 565 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4421 Tpr-Chr3 49258617 49261937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4421 47 563 Xyloglucan Fucosyltransferase1 AT2G03220 62.308 0.0 678
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4421 3 49258617 49261937 Tpr3g4421 3 49258617 49261937 ECH