Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4410 ATGGCCACTGTTACTACACAGGCTTCGGCTGCCATTTTCCGGCCATGCGGTTTGAAATCGAGGTTTCTTGCCGGTTCTTCTGGTTATAAATTGAATAGAGAAGTGGCTTTTAGGCCAGTTAAGTGTTCACCTTCTGCTTCTTTTAAGGTTTTTGCCAAGAAAGGAGAGTGGTTGCCTGGCTTGGCCTCCCCTGGTTATCTCACTGGCAGTCTTCCCGGAGACAATGGATTCGATCCATTGGGACTCGCAGAGGATCCAGAGAACTTGAAATGGTTTGTTCAAGCCGAGCTTGTAAACGGACGTTGGGCCATGTTAGGTGTTGCAGGGATGTTACTTCCTGAGGTCTTAACCAGCATTGGAATCATCAATGTTCCAAAATGGTATGATGCAGGGAAAGAAGAATACTTTGCTTCATCATCAACACTCTTTGTGATTGAGTTCATTTTGTTCCATTATGTTGAGATTAGAAGATGGCAAGACATTAAGAACCCTGGTAGCGTTAACCAAGATCCTATCTTTAAGCAATACAGCTTGCCAAAGGGTGAGGTTGGTTACCCTGGTGGAATTTTTAACCCTTTGAACTTTGCACCAACTTTGGAAGCTAAAGAGAAGGAAATTGCCAATGGAAGATTGGCAATGTTGGCATTCTTGGGATTTATAATTCAGCACAATGTGACAGGAAAAGGACCATTTGACAACCTGTTGCAGCACCTTTCAGACCCATGGCACAACACCATTGTCCAAACACTGAGTGGAGGAAACTAA 765 0.4405 MATVTTQASAAIFRPCGLKSRFLAGSSGYKLNREVAFRPVKCSPSASFKVFAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVLTSIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHLSDPWHNTIVQTLSGGN* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4410 254 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 252 - -
Tpr3g4410 254 SUPERFAMILY Chlorophyll a-b binding protein 53 250 - -
Tpr3g4410 254 Pfam Chlorophyll A-B binding protein 64 223 IPR022796 -
Tpr3g4410 254 Gene3D Chlorophyll a/b binding protein domain 64 243 - -
Tpr3g4410 254 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 252 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4410 Tpr-Chr3 49175127 49177455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4410 39 251 Chloroplast and Mitochondria Gene Families AT3G61470 53.153 2.96e-76 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4410 K08910 - pvy:116133502 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4410 3 49175127 49177455 Tpr3g4410 3 49175127 49177455 ECH