Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4386 ATGGATTACTACAACATCCTAAAAGTGAATCGAAATGCAACCGAAGACGATTTAAAGAAATCATACAAAAAACTTGTATTGGTATGGCATCCAGACAAAAACCCTGGCAACAAAGCCGCCGAAGCTGAAGCCAAATTCAAACTCATTTCAGAAGCTTATGATGTTTTAAGCGATCCACAAAAGCGTAAGATCTACGATCGTTACGGTGAAGAAGCGTTAAAATCCGGTGAAGTACCTCCACCATCTCAGAAACATTCTTCTTATGCTGCTTCTTCATCTTCTTCTTCGTCTTCGCGGCCATTTCGGAATAAACACCCTCAGAATAATACGACGTCGTTTAAGTTTAATCCTAGGGATGCGGAAGATATTTATGCTGAGATCTTTGGTGATGAAGGTGGTCCGGAAAATGGGGGGAATCGTAGGACATCGAATGGTGGTGGTGGTCAGGCGAGGAGGAAAGCTGCTCCTGTTGAGAGGCCGTTGGCTTGTAGTTTGGAAGATCTTTATAGAGGAGTTGATAAGAAGATGAAGATTTCTAGGACAATTACTGATTTTTTTGGGAAGAGTCGGACTGAGGATGAGATTTTGACTATTAATCTAAAACCTGGCTGGAAAAAAGGAACAAAGGTTACCTTCCCAGAGAAGGGTAACCAGGGGCATGATGTCATCCCGGCAGACATTATTTTTGTAATTGAAGAGAAACCACATGCTCGTTATATAAGGGATGGTCATGATTTGATTATTAACCAACAGATAAGTCTTGTTGATGCTCTTACAAGTACAACATTAGAAATCCCCACCTTGGATGGAAGGAATCTCATGGTCCCATTGCCAGGTATAGTCACACCTGGCTATGTGCACGAAGTCCCTAACGAAGGAATGCCTATATCCAGAGAACCTGGGAGGAAAGGGGTTTTGAAAATTAAGATTGATGTCAAGTATCCCACGAGTCTAACTCCTCAGCAAAAATCTGATCTAAGGAGAGTCTTAGGTTGA 996 0.4197 MDYYNILKVNRNATEDDLKKSYKKLVLVWHPDKNPGNKAAEAEAKFKLISEAYDVLSDPQKRKIYDRYGEEALKSGEVPPPSQKHSSYAASSSSSSSSRPFRNKHPQNNTTSFKFNPRDAEDIYAEIFGDEGGPENGGNRRTSNGGGGQARRKAAPVERPLACSLEDLYRGVDKKMKISRTITDFFGKSRTEDEILTINLKPGWKKGTKVTFPEKGNQGHDVIPADIIFVIEEKPHARYIRDGHDLIINQQISLVDALTSTTLEIPTLDGRNLMVPLPGIVTPGYVHEVPNEGMPISREPGRKGVLKIKIDVKYPTSLTPQQKSDLRRVLG* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4386 331 PRINTS DnaJ domain signature 4 22 IPR001623 -
Tpr3g4386 331 PRINTS DnaJ domain signature 22 37 IPR001623 -
Tpr3g4386 331 PRINTS DnaJ domain signature 41 61 IPR001623 -
Tpr3g4386 331 PRINTS DnaJ domain signature 61 80 IPR001623 -
Tpr3g4386 331 SUPERFAMILY Chaperone J-domain 1 80 IPR036869 -
Tpr3g4386 331 SMART dnaj_3 1 61 IPR001623 -
Tpr3g4386 331 Gene3D - 156 234 - -
Tpr3g4386 331 SUPERFAMILY HSP40/DnaJ peptide-binding domain 157 236 IPR008971 GO:0006457|GO:0051082
Tpr3g4386 331 MobiDBLite consensus disorder prediction 80 116 - -
Tpr3g4386 331 Gene3D - 236 316 - -
Tpr3g4386 331 ProSiteProfiles dnaJ domain profile. 2 69 IPR001623 -
Tpr3g4386 331 MobiDBLite consensus disorder prediction 128 155 - -
Tpr3g4386 331 Gene3D DnaJ domain 1 141 IPR036869 -
Tpr3g4386 331 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 330 - -
Tpr3g4386 331 MobiDBLite consensus disorder prediction 72 116 - -
Tpr3g4386 331 Pfam DnaJ C terminal domain 158 315 IPR002939 -
Tpr3g4386 331 PANTHER BNAA06G20720D PROTEIN 1 330 - -
Tpr3g4386 331 Pfam DnaJ domain 2 66 IPR001623 -
Tpr3g4386 331 ProSitePatterns Nt-dnaJ domain signature. 46 65 IPR018253 -
Tpr3g4386 331 CDD DnaJ 2 58 IPR001623 -
Tpr3g4386 331 CDD DnaJ_C 155 318 - -
Tpr3g4386 331 SUPERFAMILY HSP40/DnaJ peptide-binding domain 239 324 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4386 Tpr-Chr3 48790719 48794954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4386 3 73 C2H2 Transcription Factor Family AT1G74250 37.838 1.91e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4386 K09510 - gmx:100819472 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4386 3 48790719 48794954 Tpr3g4386 3 48790719 48794954 ECH